A1E9U9	-	e-105	CHL00028, clpP, ATP-dependent Clp protease proteolytic subunit.
C5WS35	S	8e-92	cd04852, Peptidases_S8_3, Peptidase S8 family domain,
Q84YE7	S	2e-25	pfam00112, Peptidase_C1, Papain family cysteine protease. 
C5Y594	S	4e-82	cd04852, Peptidases_S8_3, Peptidase S8 family domain,
C5X0T6	T	4e-54	cd02125, PA_VSR, PA_VSR: Protease-associated (PA) domain-containing
C5WT68	S	1e-58	cd04852, Peptidases_S8_3, Peptidase S8 family domain,
C5Y007	-	9e-26	cd04852, Peptidases_S8_3, Peptidase S8 family domain,
C5YQ11	Y	4e-11	pfam13365, Trypsin_2, Trypsin-like peptidase domain.  This family
C5WQL6	C	3e-73	cd07017, S14_ClpP_2, Caseinolytic protease (ClpP) is an
C5XG64	T	9e-57	pfam04258, Peptidase_A22B, Signal peptide peptidase.  The members
C5X0Y6	S	1e-75	cd04852, Peptidases_S8_3, Peptidase S8 family domain,
C5XIK8	Y	6e-10	pfam13365, Trypsin_2, Trypsin-like peptidase domain.  This family
C5X8Y6	S	2e-76	cd04852, Peptidases_S8_3, Peptidase S8 family domain,
C5WUK7	S	7e-79	cd04852, Peptidases_S8_3, Peptidase S8 family domain,
C5WRU9	S	2e-75	cd04852, Peptidases_S8_3, Peptidase S8 family domain,
C5Y8M5	S	3e-90	cd04852, Peptidases_S8_3, Peptidase S8 family domain,
C5X400	-	3e-34	COG0265, DegQ, Trypsin-like serine proteases, typically
C5X5M2	P	6e-55	cd02125, PA_VSR, PA_VSR: Protease-associated (PA) domain-containing
C5X6D0	S	0.0	TIGR00763, Lon_protease, endopeptidase La.  This protein, the
C5WLW8	Y	2e-06	pfam13365, Trypsin_2, Trypsin-like peptidase domain.  This family
C5YHM5	N	1e-28	cd02667, Peptidase_C19K, A subfamily of Peptidase C19. Peptidase
C5WPV2	S	1e-79	cd04852, Peptidases_S8_3, Peptidase S8 family domain,
C5Y0H4	Y	1e-71	pfam00930, DPPIV_N, Dipeptidyl peptidase IV (DPP IV) N-terminal
C5Y1Q5	C	6e-14	pfam02190, LON, ATP-dependent protease La (LON) domain.  This
C5X2X4	S	e-126	pfam00450, Peptidase_S10, Serine carboxypeptidase. 
C5XYW5	C	3e-32	TIGR02037, Probable_periplasmic_serine_protease_do/HhoA-like,
C5XZ01	V	e-136	cd02661, Peptidase_C19E, A subfamily of Peptidase C19. Peptidase
C5YFM5	C	e-104	cd01086, MetAP1, Methionine Aminopeptidase 1. E.C. 3.4.11.18. Also
C5Y006	Y	2e-33	cd04852, Peptidases_S8_3, Peptidase S8 family domain,
C5Y9K2	N	4e-07	COG0265, DegQ, Trypsin-like serine proteases, typically
C5WN62	S	1e-90	cd04852, Peptidases_S8_3, Peptidase S8 family domain,
C5YVY7	C	2e-78	TIGR02037, Probable_periplasmic_serine_protease_do/HhoA-like,
C5YMN7	-	e-108	cd02661, Peptidase_C19E, A subfamily of Peptidase C19. Peptidase
C5WWN8	M	4e-21	pfam02190, LON, ATP-dependent protease La (LON) domain.  This
C5WR08	S	8e-88	cd04852, Peptidases_S8_3, Peptidase S8 family domain,
C5Z5R2	S	3e-83	cd04852, Peptidases_S8_3, Peptidase S8 family domain,
C5XK03	N	9e-15	pfam02190, LON, ATP-dependent protease La (LON) domain.  This
C5XTM2	S	5e-81	cd04852, Peptidases_S8_3, Peptidase S8 family domain,
C5XW22	T	2e-88	pfam04258, Peptidase_A22B, Signal peptide peptidase.  The members
C5XFX9	-	5e-77	PLN00049, PLN00049, carboxyl-terminal processing protease;
C5XIZ5	S	3e-90	cd04852, Peptidases_S8_3, Peptidase S8 family domain,
C5X9E3	-	3e-27	pfam02190, LON, ATP-dependent protease La (LON) domain.  This
C5X9E5	-	e-102	cd01086, MetAP1, Methionine Aminopeptidase 1. E.C. 3.4.11.18. Also
C5XWN4	E	3e-14	TIGR02228, Signal_peptidase_I_W, signal peptidase I, archaeal type.
C5YPU6	-	1e-77	PRK10879, PRK10879, proline aminopeptidase P II; Provisional.
C5YRL8	S	2e-80	cd04852, Peptidases_S8_3, Peptidase S8 family domain,
C5Z770	N	e-132	cd02661, Peptidase_C19E, A subfamily of Peptidase C19. Peptidase
C5XTM6	S	4e-81	cd04852, Peptidases_S8_3, Peptidase S8 family domain,
C5XSS8	Y	0.0	COG1026, COG1026, Predicted Zn-dependent peptidases, insulinase-like
C5XXJ2	S	2e-23	cd04852, Peptidases_S8_3, Peptidase S8 family domain,
C5XBY9	C	2e-08	cd04852, Peptidases_S8_3, Peptidase S8 family domain,
C5YRW5	T	1e-40	cd02123, PA_C_RZF_like, PA_C-RZF_ like: Protease-associated (PA)
C5XHK7	-	3e-70	cd04852, Peptidases_S8_3, Peptidase S8 family domain,
C5XDQ1	S	3e-89	cd04852, Peptidases_S8_3, Peptidase S8 family domain,
C5YX65	S	3e-75	cd04852, Peptidases_S8_3, Peptidase S8 family domain,
C5Z676	S	2e-85	cd04852, Peptidases_S8_3, Peptidase S8 family domain,
C5WYT9	S	4e-93	cd04852, Peptidases_S8_3, Peptidase S8 family domain,
C5Y9U2	C	2e-69	TIGR02037, Probable_periplasmic_serine_protease_do/HhoA-like,
C5WLY5	V	3e-70	pfam01457, Peptidase_M8, Leishmanolysin. 
C5YSM3	E	3e-15	TIGR02228, Signal_peptidase_I_W, signal peptidase I, archaeal type.
C5YXW2	C	3e-36	TIGR02037, Probable_periplasmic_serine_protease_do/HhoA-like,
C5YDM7	S	1e-84	cd04852, Peptidases_S8_3, Peptidase S8 family domain,
C5Z7C7	P	2e-53	cd02125, PA_VSR, PA_VSR: Protease-associated (PA) domain-containing
C5XRL1	Y	1e-07	pfam13365, Trypsin_2, Trypsin-like peptidase domain.  This family
C5XI54	S	5e-07	pfam13620, CarboxypepD_reg, Carboxypeptidase regulatory-like
C5Y7R8	S	1e-69	TIGR02037, Probable_periplasmic_serine_protease_do/HhoA-like,
C5WQA1	S	9e-91	cd04852, Peptidases_S8_3, Peptidase S8 family domain,
C5XMS9	N	e-107	COG5207, UBP14, Isopeptidase T [Posttranslational modification,
C5YFN5	G_P	2e-44	cd02125, PA_VSR, PA_VSR: Protease-associated (PA) domain-containing
C5Y3H0	T	6e-61	cd02125, PA_VSR, PA_VSR: Protease-associated (PA) domain-containing
C5YV88	-	4e-06	pfam13365, Trypsin_2, Trypsin-like peptidase domain.  This family
C5Z2N7	T	9e-91	pfam04258, Peptidase_A22B, Signal peptide peptidase.  The members
C5XZY7	C	6e-28	pfam08325, WLM, WLM domain.  This is a predicted metallopeptidase
C5XN14	Y	1e-94	cd02657, Peptidase_C19A, A subfamily of Peptidase C19. Peptidase
C5YDA1	S	3e-25	cd02123, PA_C_RZF_like, PA_C-RZF_ like: Protease-associated (PA)
C5XTA3	C	1e-06	pfam13365, Trypsin_2, Trypsin-like peptidase domain.  This family
C5YJ73	N	2e-50	pfam08325, WLM, WLM domain.  This is a predicted metallopeptidase
C5X686	C	0.0	TIGR00763, Lon_protease, endopeptidase La.  This protein, the
C5XRL2	N	2e-07	pfam13365, Trypsin_2, Trypsin-like peptidase domain.  This family
C5XZX9	Y	1e-07	pfam13365, Trypsin_2, Trypsin-like peptidase domain.  This family
C5WMH6	Y	0.0	TIGR00763, Lon_protease, endopeptidase La.  This protein, the
C5Y6E0	-	e-154	pfam00450, Peptidase_S10, Serine carboxypeptidase. 
C5Z012	C	3e-38	TIGR02037, Probable_periplasmic_serine_protease_do/HhoA-like,
C5XX98	Y	6e-09	COG0265, DegQ, Trypsin-like serine proteases, typically
C5Z8W4	S	5e-85	cd04852, Peptidases_S8_3, Peptidase S8 family domain,
C5YTN1	S	e-118	pfam00450, Peptidase_S10, Serine carboxypeptidase. 
C5XXJ1	S	2e-54	cd04852, Peptidases_S8_3, Peptidase S8 family domain,
C5X3R4	N	7e-77	cd04852, Peptidases_S8_3, Peptidase S8 family domain,
C5X667	S	4e-97	cd04852, Peptidases_S8_3, Peptidase S8 family domain,
C5Y9X9	-	1e-12	pfam13365, Trypsin_2, Trypsin-like peptidase domain.  This family
C5WUT6	N	3e-10	pfam13365, Trypsin_2, Trypsin-like peptidase domain.  This family
C5YLS7	S	2e-89	cd04852, Peptidases_S8_3, Peptidase S8 family domain,
C5YPN1	Y	3e-22	pfam08325, WLM, WLM domain.  This is a predicted metallopeptidase
C5X498	S	3e-82	cd04852, Peptidases_S8_3, Peptidase S8 family domain,
C5YXB8	E	2e-14	TIGR02228, Signal_peptidase_I_W, signal peptidase I, archaeal type.
C5WY45	-	4e-94	cd08022, M28_PSMA_like, M28 Zn-peptidase prostate-specific membrane
C5Y9Y2	N	6e-06	pfam13365, Trypsin_2, Trypsin-like peptidase domain.  This family
C5YDM6	S	4e-77	cd04852, Peptidases_S8_3, Peptidase S8 family domain,
C5YQ10	Y	3e-10	pfam13365, Trypsin_2, Trypsin-like peptidase domain.  This family
C5XBQ1	-	5e-10	pfam13365, Trypsin_2, Trypsin-like peptidase domain.  This family
C5Z0C8	N	4e-11	pfam13365, Trypsin_2, Trypsin-like peptidase domain.  This family
C5XK00	Y	9e-99	cd08022, M28_PSMA_like, M28 Zn-peptidase prostate-specific membrane
C5YBS5	S	3e-94	cd04852, Peptidases_S8_3, Peptidase S8 family domain,
C5YD59	S	4e-65	cd04852, Peptidases_S8_3, Peptidase S8 family domain,
C5WTK5	S	e-128	pfam00450, Peptidase_S10, Serine carboxypeptidase. 
C5XJ81	-	1e-98	cd08022, M28_PSMA_like, M28 Zn-peptidase prostate-specific membrane
C5XIJ1	E	5e-09	pfam13365, Trypsin_2, Trypsin-like peptidase domain.  This family
C5YB45	T	6e-42	cd02123, PA_C_RZF_like, PA_C-RZF_ like: Protease-associated (PA)
C5YAY2	T	4e-81	pfam04258, Peptidase_A22B, Signal peptide peptidase.  The members
C5YE56	S	1e-98	cd04852, Peptidases_S8_3, Peptidase S8 family domain,
C5Y1E2	S	2e-85	cd04852, Peptidases_S8_3, Peptidase S8 family domain,
C5XHB2	S	9e-83	cd04852, Peptidases_S8_3, Peptidase S8 family domain,
C5WUT2	-	5e-13	pfam13365, Trypsin_2, Trypsin-like peptidase domain.  This family
C5XME3	S	1e-89	cd04852, Peptidases_S8_3, Peptidase S8 family domain,
C5YNZ0	-	4e-11	pfam13365, Trypsin_2, Trypsin-like peptidase domain.  This family
C5YSC3	C	4e-44	TIGR02037, Probable_periplasmic_serine_protease_do/HhoA-like,
C5X2Z1	S	e-102	cd02661, Peptidase_C19E, A subfamily of Peptidase C19. Peptidase
C5YD49	S	5e-70	cd04852, Peptidases_S8_3, Peptidase S8 family domain,
C5YX14	M	1e-09	pfam13365, Trypsin_2, Trypsin-like peptidase domain.  This family
C5XST1	-	e-108	cd01086, MetAP1, Methionine Aminopeptidase 1. E.C. 3.4.11.18. Also
C5XCF0	S	2e-82	cd04852, Peptidases_S8_3, Peptidase S8 family domain,
C5WRB3	-	9e-79	cd02661, Peptidase_C19E, A subfamily of Peptidase C19. Peptidase
C5YDF2	Y	1e-47	pfam05903, Peptidase_C97, PPPDE putative peptidase domain.  The
C5XQP2	S	e-116	cd05472, cnd41_like, Chloroplast Nucleoids DNA-binding Protease,
C5Y7H3	S	5e-74	pfam00450, Peptidase_S10, Serine carboxypeptidase. 
C5YBZ7	-	2e-07	pfam02902, Peptidase_C48, Ulp1 protease family, C-terminal
C5Y9A3	S	e-129	pfam00450, Peptidase_S10, Serine carboxypeptidase. 
C5YD25	S	4e-61	cd04852, Peptidases_S8_3, Peptidase S8 family domain,
C5YWZ8	C	1e-49	cd07017, S14_ClpP_2, Caseinolytic protease (ClpP) is an
C5WXQ4	-	9e-30	pfam00656, Peptidase_C14, Caspase domain. 
C5YF84	C	0.0	CHL00095, clpC, Clp protease ATP binding subunit.
C5YL74	-	4e-21	PRK00033, clpS, ATP-dependent Clp protease adaptor protein ClpS;
C5WRV4	-	2e-27	pfam02338, OTU, OTU-like cysteine protease.  This family is
C5YSW2	S	5e-93	cd05472, cnd41_like, Chloroplast Nucleoids DNA-binding Protease,
C5X359	S	e-100	pfam00450, Peptidase_S10, Serine carboxypeptidase. 
C5WW86	S	3e-68	pfam05577, Peptidase_S28, Serine carboxypeptidase S28.  These
C5XR37	-	e-176	TIGR01241, ATP-dependent_zinc_metalloprotease_FtsH, ATP-dependent
C5WXQ5	-	6e-34	pfam00656, Peptidase_C14, Caspase domain. 
C5XXP6	Y	4e-19	cd07474, Peptidases_S8_subtilisin_Vpr-like, Peptidase S8 family
C5Y5T9	S	2e-72	PLN03146, PLN03146, aspartyl protease family protein; Provisional.
C5Z3N7	S	3e-32	pfam00450, Peptidase_S10, Serine carboxypeptidase. 
C5XR79	Y	3e-23	cd04852, Peptidases_S8_3, Peptidase S8 family domain,
C5Y995	P	3e-42	pfam06703, SPC25, Microsomal signal peptidase 25 kDa subunit
C5WW85	-	3e-50	pfam05577, Peptidase_S28, Serine carboxypeptidase S28.  These
C5YWQ6	T	1e-08	pfam02517, Abi, CAAX protease self-immunity.  Members of this
C5XCS4	C	5e-08	pfam02517, Abi, CAAX protease self-immunity.  Members of this
C5YDY2	Y	e-131	COG1505, COG1505, Serine proteases of the peptidase family S9A
C5X2Y1	Y	8e-07	pfam02902, Peptidase_C48, Ulp1 protease family, C-terminal
C5X470	S	4e-57	cd05472, cnd41_like, Chloroplast Nucleoids DNA-binding Protease,
C5XY68	S	e-149	pfam00450, Peptidase_S10, Serine carboxypeptidase. 
C5XZC9	-	e-118	cd05475, nucellin_like, Nucellins, plant aspartic proteases
C5Z3I5	P	3e-17	pfam02517, Abi, CAAX protease self-immunity.  Members of this
C5WTX6	Y	e-176	cd08017, M20_IAA_Hyd, M20 Peptidase Indole-3-acetic acid amino acid
C5WRS1	Y	5e-80	cd09617, Peptidase_C12_UCH37_BAP1, Cysteine peptidase C12
C5XEC8	S	3e-93	cd05472, cnd41_like, Chloroplast Nucleoids DNA-binding Protease,
C5XLP1	Y	0.0	COG1025, Ptr, Secreted/periplasmic Zn-dependent peptidases,
C5XU10	Y	0.0	COG0542, clpA, ATP-binding subunits of Clp protease and DnaK/DnaJ
C5YCP4	S	3e-95	pfam00112, Peptidase_C1, Papain family cysteine protease. 
C5YRK1	V	9e-09	pfam10275, Peptidase_C65, Peptidase C65 Otubain.  This family of
C5YUD0	C	0.0	PTZ00340, PTZ00340, O-sialoglycoprotein endopeptidase-like protein;
C5XD69	Y	5e-12	cd02248, Peptidase_C1A, Peptidase C1A subfamily (MEROPS database
C5XZR3	S	e-105	cd05472, cnd41_like, Chloroplast Nucleoids DNA-binding Protease,
C5XP10	T	e-151	pfam00450, Peptidase_S10, Serine carboxypeptidase. 
C5XF81	K	2e-10	PLN03189, PLN03189, Protease specific for SMALL UBIQUITIN-RELATED
C5YSW9	S	1e-44	cd05472, cnd41_like, Chloroplast Nucleoids DNA-binding Protease,
C5YRH2	Y	1e-18	COG5160, ULP1, Protease, Ulp1 family [Posttranslational
C5XYQ7	E	3e-06	pfam02902, Peptidase_C48, Ulp1 protease family, C-terminal
C5Z1K1	S	1e-94	cd05472, cnd41_like, Chloroplast Nucleoids DNA-binding Protease,
C6JRW8	S	8e-16	cd02125, PA_VSR, PA_VSR: Protease-associated (PA) domain-containing
C5Z6S5	S	2e-73	pfam05577, Peptidase_S28, Serine carboxypeptidase S28.  These
C5WUW3	S	7e-54	cd05472, cnd41_like, Chloroplast Nucleoids DNA-binding Protease,
C5YQM6	S	e-157	cd08017, M20_IAA_Hyd, M20 Peptidase Indole-3-acetic acid amino acid
C5WU38	Y	1e-12	pfam02902, Peptidase_C48, Ulp1 protease family, C-terminal
C5YI44	N	4e-33	cd02667, Peptidase_C19K, A subfamily of Peptidase C19. Peptidase
C5YAI4	T	e-103	cd05472, cnd41_like, Chloroplast Nucleoids DNA-binding Protease,
C5XJX6	T	3e-09	pfam02902, Peptidase_C48, Ulp1 protease family, C-terminal
C5Y2W0	S	e-111	pfam00450, Peptidase_S10, Serine carboxypeptidase. 
C5YAX6	C	1e-49	pfam04096, Nucleoporin2, Nucleoporin autopeptidase. 
C5YA10	Y	2e-47	cd09616, Peptidase_C12_UCH_L1_L3, Cysteine peptidase C12 containing
C5Z1N2	E	1e-78	PLN00049, PLN00049, carboxyl-terminal processing protease;
C5YFP8	K	6e-34	COG0612, PqqL, Predicted Zn-dependent peptidases [General function
C5XMR7	S	e-100	PLN03146, PLN03146, aspartyl protease family protein; Provisional.
C5Y918	C	e-105	cd02660, Peptidase_C19D, A subfamily of Peptidase C19. Peptidase
C5X2X9	S	e-134	pfam00450, Peptidase_S10, Serine carboxypeptidase. 
C5XQ74	S	e-117	cd05472, cnd41_like, Chloroplast Nucleoids DNA-binding Protease,
C5X2X5	Y	e-121	pfam00450, Peptidase_S10, Serine carboxypeptidase. 
C5Z0B8	Y	2e-27	pfam00656, Peptidase_C14, Caspase domain. 
C5XJD5	S	3e-93	pfam00112, Peptidase_C1, Papain family cysteine protease. 
C5Y0Y9	P	4e-47	pfam01435, Peptidase_M48, Peptidase family M48. 
C5YRK2	N	6e-18	pfam10275, Peptidase_C65, Peptidase C65 Otubain.  This family of
C5XCX8	S	e-106	cd05472, cnd41_like, Chloroplast Nucleoids DNA-binding Protease,
C5YE82	S	e-139	pfam00450, Peptidase_S10, Serine carboxypeptidase. 
C5WMH0	C	2e-42	COG1506, DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases
C5YFC9	N	5e-10	pfam02902, Peptidase_C48, Ulp1 protease family, C-terminal
C5YBL5	S	7e-13	pfam00450, Peptidase_S10, Serine carboxypeptidase. 
C6JRX4	Y	1e-19	cd02125, PA_VSR, PA_VSR: Protease-associated (PA) domain-containing
C5WRG5	-	1e-38	pfam00656, Peptidase_C14, Caspase domain. 
C5XTC1	C	0.0	COG0542, clpA, ATP-binding subunits of Clp protease and DnaK/DnaJ
C5YD04	N	2e-12	PLN03189, PLN03189, Protease specific for SMALL UBIQUITIN-RELATED
C5XTY0	Y	9e-13	cd02619, Peptidase_C1, C1 Peptidase family (MEROPS database
C5WUF8	-	2e-37	pfam05903, Peptidase_C97, PPPDE putative peptidase domain.  The
C5XY28	Y	0.0	cd09601, M1_APN_2, Peptidase M1 Aminopeptidase N family incudes
C5WSD4	S	2e-56	pfam00413, Peptidase_M10, Matrixin.  The members of this family are
C5YM79	S	3e-82	PLN03146, PLN03146, aspartyl protease family protein; Provisional.
C5X249	S	e-178	cd08017, M20_IAA_Hyd, M20 Peptidase Indole-3-acetic acid amino acid
C5XP86	S	e-153	pfam00450, Peptidase_S10, Serine carboxypeptidase. 
C5XDQ9	C	1e-37	cd05472, cnd41_like, Chloroplast Nucleoids DNA-binding Protease,
C5XFI4	S	7e-97	pfam00112, Peptidase_C1, Papain family cysteine protease. 
C5Z6J1	C	2e-63	COG1506, DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases
C5YW85	-	7e-10	COG5160, ULP1, Protease, Ulp1 family [Posttranslational
C5XLZ2	-	7e-47	COG0612, PqqL, Predicted Zn-dependent peptidases [General function
C5XBZ0	S	3e-65	cd04852, Peptidases_S8_3, Peptidase S8 family domain,
C5WUA3	T	7e-56	TIGR00054, Putative_zinc_metalloprotease_slr1821, RIP
C5YGA4	-	4e-07	COG0542, clpA, ATP-binding subunits of Clp protease and DnaK/DnaJ
C5Z3W0	T	e-122	cd03858, M14_CP_N-E_like, Peptidase M14 carboxypeptidase subfamily
C5WXI4	E	8e-08	pfam02902, Peptidase_C48, Ulp1 protease family, C-terminal catalytic
C5X576	C	3e-13	pfam02517, Abi, CAAX protease self-immunity.  Members of this
C5XS49	S	e-122	pfam01650, Peptidase_C13, Peptidase C13 family.  Members of this
C5WMG5	C	6e-93	PRK00277, clpP, ATP-dependent Clp protease proteolytic subunit;
C5XKY2	S	1e-69	pfam05577, Peptidase_S28, Serine carboxypeptidase S28.  These
C5Y0I6	-	e-137	PRK05342, clpX, ATP-dependent protease ATP-binding subunit ClpX;
C5X406	Y	2e-11	cd02248, Peptidase_C1A, Peptidase C1A subfamily (MEROPS database
C5XXX4	Y	3e-25	pfam00656, Peptidase_C14, Caspase domain. 
C5XV47	C	2e-62	cd07017, S14_ClpP_2, Caseinolytic protease (ClpP) is an
C5XZU3	S	e-101	cd05472, cnd41_like, Chloroplast Nucleoids DNA-binding Protease,
C5XPQ2	M	0.0	TIGR01241, ATP-dependent_zinc_metalloprotease_FtsH, ATP-dependent
C5XTM1	S	5e-82	cd04852, Peptidases_S8_3, Peptidase S8 family domain,
C5Y1W8	T	2e-09	COG5160, ULP1, Protease, Ulp1 family [Posttranslational
C5Z2U7	Y	5e-42	cd03875, M28_Fxna_like, M28 Zn-peptidase Endoplasmic reticulum
C5WX88	S	1e-96	pfam00112, Peptidase_C1, Papain family cysteine protease. 
C5Y682	S	1e-81	cd05475, nucellin_like, Nucellins, plant aspartic proteases
C5Y6I4	-	6e-19	TIGR02227, Inactive_signal_peptidase_IA., signal peptidase I,
C5X410	-	3e-08	pfam00112, Peptidase_C1, Papain family cysteine protease. 
C5XCV7	N	4e-06	PRK10779, PRK10779, zinc metallopeptidase RseP; Provisional.
C5YLD1	T	3e-88	cd03882, M28_nicalin_like, M28 Zn-Peptidase Nicalin, Nicastrin-like
C5XSJ5	Y	e-144	PRK00913, PRK00913, multifunctional aminopeptidase A; Provisional.
C5XYC9	E	4e-08	pfam02902, Peptidase_C48, Ulp1 protease family, C-terminal
C5XBY3	S	3e-75	cd04852, Peptidases_S8_3, Peptidase S8 family domain,
C5YB60	-	2e-18	TIGR02227, Inactive_signal_peptidase_IA., signal peptidase I,
C5WXE0	-	3e-28	pfam04450, BSP, Peptidase of plants and bacteria.  These basic
C5XRK5	N	3e-44	pfam07910, Peptidase_C78, Peptidase family C78.  This family
C5YDQ2	S	1e-96	pfam00112, Peptidase_C1, Papain family cysteine protease. 
C5WXN2	S	4e-64	pfam00450, Peptidase_S10, Serine carboxypeptidase. 
C5YCF0	S	e-180	cd08017, M20_IAA_Hyd, M20 Peptidase Indole-3-acetic acid amino acid
C5YGW2	C	3e-12	cd04852, Peptidases_S8_3, Peptidase S8 family domain,
C5X2X8	S	e-140	pfam00450, Peptidase_S10, Serine carboxypeptidase. 
C5YPI9	S	4e-82	cd04852, Peptidases_S8_3, Peptidase S8 family domain,
C5YAS3	Y	3e-07	pfam02902, Peptidase_C48, Ulp1 protease family, C-terminal
C5YRV1	N	4e-06	COG1025, Ptr, Secreted/periplasmic Zn-dependent peptidases,
C5Z8G8	N	8e-85	pfam00112, Peptidase_C1, Papain family cysteine protease. 
C5X7S1	S	3e-58	pfam04573, SPC22, Signal peptidase subunit.  Translocation of
C5YC77	Y	9e-20	TIGR02227, Inactive_signal_peptidase_IA., signal peptidase I,
C5WSU8	M	1e-82	COG0612, PqqL, Predicted Zn-dependent peptidases [General function
C5X514	S	e-116	pfam00450, Peptidase_S10, Serine carboxypeptidase. 
C5XMG1	Y	5e-29	pfam00656, Peptidase_C14, Caspase domain. 
C5Z264	N	1e-33	pfam05903, Peptidase_C97, PPPDE putative peptidase domain.  The
C5Z872	S	3e-81	pfam00112, Peptidase_C1, Papain family cysteine protease. 
C5XNS5	M	0.0	TIGR01241, ATP-dependent_zinc_metalloprotease_FtsH, ATP-dependent
C5YBL9	S	9e-57	pfam00450, Peptidase_S10, Serine carboxypeptidase. 
C5XYE8	N	2e-89	pfam03568, Peptidase_C50, Peptidase family C50. 
C5WUN3	N	4e-43	pfam05903, Peptidase_C97, PPPDE putative peptidase domain.  The
C5YFW6	C	2e-50	pfam07910, Peptidase_C78, Peptidase family C78.  This family
C5XJX8	Y	e-120	PLN03189, PLN03189, Protease specific for SMALL UBIQUITIN-RELATED
C5Y592	Y	2e-12	cd07481, Peptidases_S8_BacillopeptidaseF-like, Peptidase S8 family
C5WM58	Y	7e-07	COG5160, ULP1, Protease, Ulp1 family [Posttranslational
C5YTN3	S	8e-28	pfam00450, Peptidase_S10, Serine carboxypeptidase. 
C5Z2V9	C	1e-68	cd05472, cnd41_like, Chloroplast Nucleoids DNA-binding Protease,
C5YNR4	N	e-105	cd02668, Peptidase_C19L, A subfamily of Peptidase C19. Peptidase
C5Z5S4	S	e-111	cd05472, cnd41_like, Chloroplast Nucleoids DNA-binding Protease,
C5XEN9	-	e-168	PRK05342, clpX, ATP-dependent protease ATP-binding subunit ClpX;
C5YCP5	S	7e-96	pfam00112, Peptidase_C1, Papain family cysteine protease. 
C5XFF0	M	4e-20	pfam02338, OTU, OTU-like cysteine protease.  This family is
C5Z957	S	5e-51	cd05472, cnd41_like, Chloroplast Nucleoids DNA-binding Protease,
C5Z956	Y	9e-21	cd05472, cnd41_like, Chloroplast Nucleoids DNA-binding Protease,
C5X4J9	S	2e-82	pfam00112, Peptidase_C1, Papain family cysteine protease. 
C5Z2M6	Y	0.0	COG1770, PtrB, Protease II [Amino acid transport and metabolism].
C5X8T2	S	e-148	pfam00450, Peptidase_S10, Serine carboxypeptidase. 
C5YCP2	-	1e-77	pfam00112, Peptidase_C1, Papain family cysteine protease. 
C5YFE9	N	5e-12	pfam02338, OTU, OTU-like cysteine protease.  This family is
C5X0M7	C	9e-61	PRK12552, PRK12552, ATP-dependent Clp protease-like protein;
C5YP47	N	5e-11	pfam02902, Peptidase_C48, Ulp1 protease family, C-terminal
C5Z5H1	-	3e-44	pfam05903, Peptidase_C97, PPPDE putative peptidase domain.  The
C5XVL4	Y	2e-28	pfam00656, Peptidase_C14, Caspase domain. 
C5Z8C8	S	2e-87	pfam00112, Peptidase_C1, Papain family cysteine protease. 
C5WNP0	M	3e-45	pfam05903, Peptidase_C97, PPPDE putative peptidase domain.  The
C5YAM8	Y	e-106	PLN02937, PLN02937, Putative isoaspartyl peptidase/L-asparaginase.
C5XDR4	S	3e-95	pfam00112, Peptidase_C1, Papain family cysteine protease. 
C5XAQ4	S	6e-76	PLN03146, PLN03146, aspartyl protease family protein; Provisional.
C5YGH2	N	2e-24	cd02667, Peptidase_C19K, A subfamily of Peptidase C19. Peptidase
C5X3T4	S	e-109	cd05472, cnd41_like, Chloroplast Nucleoids DNA-binding Protease,
C5YWG5	E	3e-31	pfam04450, BSP, Peptidase of plants and bacteria.  These basic
C5Z8A8	N	0.0	cd02669, Peptidase_C19M, A subfamily of Peptidase C19. Peptidase
C5YSW1	S	3e-93	cd05472, cnd41_like, Chloroplast Nucleoids DNA-binding Protease,
C5XT31	N	3e-19	COG5160, ULP1, Protease, Ulp1 family [Posttranslational
C5WXQ6	-	4e-26	pfam00656, Peptidase_C14, Caspase domain. 
C5XSE6	T	2e-83	cd06227, M14-like_2, Peptidase M14-like domain; uncharacterized
C5Z962	S	e-101	cd05472, cnd41_like, Chloroplast Nucleoids DNA-binding Protease,
C5Z4N6	Y	2e-49	pfam05903, Peptidase_C97, PPPDE putative peptidase domain.  The
C5YUG7	C	e-142	PRK05342, clpX, ATP-dependent protease ATP-binding subunit ClpX;
C5WW58	N	3e-20	pfam02338, OTU, OTU-like cysteine protease.  This family is
C5XHN2	S	e-167	cd08017, M20_IAA_Hyd, M20 Peptidase Indole-3-acetic acid amino acid
C5YR14	S	e-137	cd03884, M20_bAS, M20 Peptidase beta-alanine synthase, an
C5Z958	S	3e-54	cd05472, cnd41_like, Chloroplast Nucleoids DNA-binding Protease,
C5XAP0	P	0.0	cd09601, M1_APN_2, Peptidase M1 Aminopeptidase N family incudes
C5WPA6	Y	2e-40	pfam13398, Peptidase_M50B, Peptidase M50B-like.  This is a family
C6JS25	Y	9e-29	cd08017, M20_IAA_Hyd, M20 Peptidase Indole-3-acetic acid amino acid
C5Z6S6	N	7e-14	pfam05577, Peptidase_S28, Serine carboxypeptidase S28.  These
C5XAQ5	S	1e-78	PLN03146, PLN03146, aspartyl protease family protein; Provisional.
C5XPZ6	Y	0.0	PLN02180, PLN02180, gamma-glutamyl transpeptidase 4.
C5YS31	Y	2e-18	PLN03146, PLN03146, aspartyl protease family protein; Provisional.
C5X455	S	e-151	pfam00450, Peptidase_S10, Serine carboxypeptidase. 
C5YJX2	-	e-110	cd05472, cnd41_like, Chloroplast Nucleoids DNA-binding Protease,
C5YDE1	-	7e-78	cd09616, Peptidase_C12_UCH_L1_L3, Cysteine peptidase C12 containing
C5X1L7	N	4e-43	COG1506, DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases
C5XLB5	C	4e-78	cd07017, S14_ClpP_2, Caseinolytic protease (ClpP) is an
C5Y288	-	4e-51	cd02674, Peptidase_C19R, A subfamily of peptidase C19. Peptidase
C5YRH7	Y	1e-24	COG5160, ULP1, Protease, Ulp1 family [Posttranslational
C5XZU2	S	e-106	cd05472, cnd41_like, Chloroplast Nucleoids DNA-binding Protease,
C5Y128	S	e-108	pfam00450, Peptidase_S10, Serine carboxypeptidase. 
C5X8J7	S	7e-81	pfam00112, Peptidase_C1, Papain family cysteine protease. 
C5YIT5	-	8e-20	pfam02338, OTU, OTU-like cysteine protease.  This family is
C5XJR9	S	e-114	pfam00450, Peptidase_S10, Serine carboxypeptidase. 
C5YZP8	N	3e-07	pfam02902, Peptidase_C48, Ulp1 protease family, C-terminal
C5Y0S1	Y	0.0	cd08012, M20_ArgE-related, M20 Peptidases with simlarity to
C5YTN2	Y	1e-43	pfam00450, Peptidase_S10, Serine carboxypeptidase. 
C5YSL0	-	3e-30	pfam00656, Peptidase_C14, Caspase domain. 
C5X4P2	N	2e-43	cd02667, Peptidase_C19K, A subfamily of Peptidase C19. Peptidase C19
C5XS32	C	e-151	TIGR01241, ATP-dependent_zinc_metalloprotease_FtsH, ATP-dependent
C5YZ91	M	0.0	TIGR01241, ATP-dependent_zinc_metalloprotease_FtsH, ATP-dependent
C5X247	S	e-169	cd08017, M20_IAA_Hyd, M20 Peptidase Indole-3-acetic acid amino acid
C5WR90	-	0.0	PTZ00454, PTZ00454, 26S protease regulatory subunit 6B-like
C5YK66	C	1e-23	cd05472, cnd41_like, Chloroplast Nucleoids DNA-binding Protease,
C5YYE4	S	3e-94	pfam00112, Peptidase_C1, Papain family cysteine protease. 
C5XVT5	M	4e-50	pfam05903, Peptidase_C97, PPPDE putative peptidase domain.  The
C5X412	S	2e-75	cd02248, Peptidase_C1A, Peptidase C1A subfamily (MEROPS database
C5YI45	N	1e-33	cd02667, Peptidase_C19K, A subfamily of Peptidase C19. Peptidase
C5Z0S2	S	8e-92	pfam00112, Peptidase_C1, Papain family cysteine protease. 
C5Z0M0	S	e-138	pfam00450, Peptidase_S10, Serine carboxypeptidase. 
C5Z4U7	T	e-148	cd07479, Peptidases_S8_SKI-1_like, Peptidase S8 family domain in
C5WQZ5	S	1e-96	cd05472, cnd41_like, Chloroplast Nucleoids DNA-binding Protease,
C5Y502	Y	3e-19	pfam00656, Peptidase_C14, Caspase domain. 
C5YGG8	Y	0.0	COG0542, clpA, ATP-binding subunits of Clp protease and DnaK/DnaJ
C5X3D7	Y	1e-42	cd00501, Peptidase_C15, Pyroglutamyl peptidase (PGP) type I, also
C5Y9R6	-	1e-18	cd05472, cnd41_like, Chloroplast Nucleoids DNA-binding Protease,
C5YIV5	Y	2e-97	cd01086, MetAP1, Methionine Aminopeptidase 1. E.C. 3.4.11.18. Also
C5YWH3	S	3e-94	pfam00450, Peptidase_S10, Serine carboxypeptidase. 
C5Z8G6	S	8e-87	pfam00112, Peptidase_C1, Papain family cysteine protease. 
C5Y1W9	S	e-131	pfam00450, Peptidase_S10, Serine carboxypeptidase. 
C5YPF6	S	8e-82	cd04852, Peptidases_S8_3, Peptidase S8 family domain,
C5Z8D2	S	5e-99	pfam00112, Peptidase_C1, Papain family cysteine protease. 
C5XQF2	N	1e-08	COG5160, ULP1, Protease, Ulp1 family [Posttranslational
C5XPN8	C	7e-37	pfam10275, Peptidase_C65, Peptidase C65 Otubain.  This family of
C5XVY6	N	8e-23	pfam02338, OTU, OTU-like cysteine protease.  This family is
C5YSW8	S	5e-89	cd05472, cnd41_like, Chloroplast Nucleoids DNA-binding Protease,
C5XSC1	T	2e-73	pfam04258, Peptidase_A22B, Signal peptide peptidase.  The members
C5XCQ5	Y	7e-12	COG1770, PtrB, Protease II [Amino acid transport and metabolism].
C5XKZ2	S	3e-84	cd04852, Peptidases_S8_3, Peptidase S8 family domain,
C5XVH7	N	2e-27	COG5539, COG5539, Predicted cysteine protease (OTU family)
C5WXD8	S	1e-56	pfam04450, BSP, Peptidase of plants and bacteria.  These basic
C5XZL7	C	8e-36	TIGR02227, Inactive_signal_peptidase_IA., signal peptidase I,
C5WP39	Y	8e-08	PLN03189, PLN03189, Protease specific for SMALL UBIQUITIN-RELATED
C5XJ69	N	5e-23	COG5160, ULP1, Protease, Ulp1 family [Posttranslational
C5Z5I7	N	e-138	cd02661, Peptidase_C19E, A subfamily of Peptidase C19. Peptidase
C5XQ65	N	2e-12	pfam04258, Peptidase_A22B, Signal peptide peptidase.  The members
C5WS86	-	1e-07	pfam02902, Peptidase_C48, Ulp1 protease family, C-terminal
C5Z8G7	S	2e-86	pfam00112, Peptidase_C1, Papain family cysteine protease. 
C5XV02	-	e-176	PRK05342, clpX, ATP-dependent protease ATP-binding subunit ClpX;
C5Y9R5	M	1e-10	PLN03146, PLN03146, aspartyl protease family protein; Provisional.
C5YL96	C	2e-16	pfam02517, Abi, CAAX protease self-immunity.  Members of this
C5Y681	S	5e-82	cd05475, nucellin_like, Nucellins, plant aspartic proteases
C5YST3	S	e-111	cd05475, nucellin_like, Nucellins, plant aspartic proteases
C5XT89	N	2e-35	pfam10275, Peptidase_C65, Peptidase C65 Otubain.  This family of
C5WVP4	S	8e-78	pfam00112, Peptidase_C1, Papain family cysteine protease. 
C5X515	S	e-120	pfam00450, Peptidase_S10, Serine carboxypeptidase. 
C5YVB7	S	e-143	pfam00450, Peptidase_S10, Serine carboxypeptidase. 
C5Z8D3	S	4e-99	pfam00112, Peptidase_C1, Papain family cysteine protease. 
C5YSW6	S	2e-89	cd05472, cnd41_like, Chloroplast Nucleoids DNA-binding Protease,
C5XI82	M	6e-79	COG0612, PqqL, Predicted Zn-dependent peptidases [General function
C5YH94	N	0.0	PTZ00053, PTZ00053, methionine aminopeptidase 2; Provisional.
C5XZE9	-	3e-72	TIGR00705, Protease_4, signal peptide peptidase SppA, 67K type.
C5X360	S	e-129	pfam00450, Peptidase_S10, Serine carboxypeptidase. 
C5Z2I4	Y	1e-12	COG1770, PtrB, Protease II [Amino acid transport and metabolism].
C5YYP1	S	5e-85	cd04852, Peptidases_S8_3, Peptidase S8 family domain,
C5X096	S	5e-88	pfam00112, Peptidase_C1, Papain family cysteine protease. 
C5Y0R5	N	5e-70	cd02661, Peptidase_C19E, A subfamily of Peptidase C19. Peptidase
C5Y1C4	S	5e-57	cd04852, Peptidases_S8_3, Peptidase S8 family domain,
C5XR77	S	3e-15	cd04852, Peptidases_S8_3, Peptidase S8 family domain,
C5Y3S6	-	e-103	cd01085, APP, X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also known
C5XS84	S	e-140	pfam00450, Peptidase_S10, Serine carboxypeptidase. 
C5YKJ1	S	2e-08	pfam02902, Peptidase_C48, Ulp1 protease family, C-terminal
C5XG06	-	2e-07	pfam02902, Peptidase_C48, Ulp1 protease family, C-terminal
C5Y698	S	6e-87	pfam00112, Peptidase_C1, Papain family cysteine protease. 
C5Y9B6	S	6e-60	PLN03146, PLN03146, aspartyl protease family protein; Provisional.
C5XUF6	S	e-161	PRK00913, PRK00913, multifunctional aminopeptidase A; Provisional.
C5WYJ1	S	e-140	pfam00450, Peptidase_S10, Serine carboxypeptidase. 
C5XEJ7	Y	0.0	cd05658, M18_DAP, M18 Peptidase Aspartyl aminopeptidase.  Peptidase
C5X2X7	-	5e-06	pfam00450, Peptidase_S10, Serine carboxypeptidase. 
C5Y9P6	N	e-142	cd02663, Peptidase_C19G, A subfamily of Peptidase C19. Peptidase
C5YCP3	S	3e-86	pfam00112, Peptidase_C1, Papain family cysteine protease. 
C5YWH4	S	4e-93	pfam00450, Peptidase_S10, Serine carboxypeptidase. 
C5YLH6	Y	e-152	CHL00095, clpC, Clp protease ATP binding subunit.
C5WVF4	Y	2e-08	pfam02902, Peptidase_C48, Ulp1 protease family, C-terminal
C5XBF3	-	8e-08	pfam02902, Peptidase_C48, Ulp1 protease family, C-terminal
C5XNM6	S	e-126	pfam01650, Peptidase_C13, Peptidase C13 family.  Members of this
C5Z2Z5	N	2e-08	pfam02902, Peptidase_C48, Ulp1 protease family, C-terminal
C5Z8D0	S	2e-43	pfam00112, Peptidase_C1, Papain family cysteine protease. 
C5Z0B6	Y	3e-26	pfam00656, Peptidase_C14, Caspase domain. 
C5WYQ5	Y	6e-39	cd00501, Peptidase_C15, Pyroglutamyl peptidase (PGP) type I, also
C5XJA6	M	1e-59	COG0612, PqqL, Predicted Zn-dependent peptidases [General function
C5YF83	S	e-125	pfam00450, Peptidase_S10, Serine carboxypeptidase. 
C5Z0G2	-	3e-18	TIGR02227, Inactive_signal_peptidase_IA., signal peptidase I,
C5Y8I7	S	2e-81	cd05472, cnd41_like, Chloroplast Nucleoids DNA-binding Protease,
C5YRH4	Y	2e-07	pfam02902, Peptidase_C48, Ulp1 protease family, C-terminal
C5XSC7	S	e-102	cd05472, cnd41_like, Chloroplast Nucleoids DNA-binding Protease,
C5WYJ2	M	9e-97	pfam00450, Peptidase_S10, Serine carboxypeptidase. 
C5WQ46	M	2e-10	pfam02338, OTU, OTU-like cysteine protease.  This family is
C5X287	-	4e-39	TIGR02227, Inactive_signal_peptidase_IA., signal peptidase I,
C5XS90	N	5e-40	pfam10275, Peptidase_C65, Peptidase C65 Otubain.  This family of
C5Y517	T	6e-74	pfam05577, Peptidase_S28, Serine carboxypeptidase S28.  These
C5XJS0	S	e-144	pfam00450, Peptidase_S10, Serine carboxypeptidase. 
C5YX18	S	e-121	pfam01650, Peptidase_C13, Peptidase C13 family.  Members of this
C5XNM2	P	3e-34	COG0612, PqqL, Predicted Zn-dependent peptidases [General function
C5Z7I6	S	1e-53	cd04278, ZnMc_MMP, Zinc-dependent metalloprotease, matrix
C5X345	-	e-155	COG1770, PtrB, Protease II [Amino acid transport and metabolism].
C5WXD6	S	2e-76	pfam04450, BSP, Peptidase of plants and bacteria.  These basic
C5XRZ7	-	3e-49	pfam05903, Peptidase_C97, PPPDE putative peptidase domain.  The
C5YWW9	-	3e-18	TIGR02227, Inactive_signal_peptidase_IA., signal peptidase I,
C5YSX1	S	7e-39	cd05472, cnd41_like, Chloroplast Nucleoids DNA-binding Protease,
C5Z7M6	S	e-124	cd03884, M20_bAS, M20 Peptidase beta-alanine synthase, an
C5Y1E8	S	0.0	cd04857, Peptidases_S8_Tripeptidyl_Aminopeptidase_II, Peptidase S8
C5YX11	-	0.0	TIGR01241, ATP-dependent_zinc_metalloprotease_FtsH, ATP-dependent
C5Z954	S	e-101	cd05472, cnd41_like, Chloroplast Nucleoids DNA-binding Protease,
C5YYB8	N	2e-07	pfam02902, Peptidase_C48, Ulp1 protease family, C-terminal
C5Z1B1	S	4e-50	pfam00413, Peptidase_M10, Matrixin.  The members of this family are
C5XJB3	-	0.0	cd05658, M18_DAP, M18 Peptidase Aspartyl aminopeptidase.  Peptidase
C5X409	S	8e-72	cd02248, Peptidase_C1A, Peptidase C1A subfamily (MEROPS database
C5XDL8	N	1e-06	pfam02902, Peptidase_C48, Ulp1 protease family, C-terminal
C5Y289	S	2e-90	pfam00112, Peptidase_C1, Papain family cysteine protease. 
C5X8I6	S	e-140	pfam00450, Peptidase_S10, Serine carboxypeptidase. 
C5Z8A9	-	e-176	cd06457, M3A_MIP, Peptidase M3 mitochondrial intermediate peptidase
C5XWR0	S	0.0	cd06456, M3A_DCP, Peptidase family M3 dipeptidyl carboxypeptidase
C5XCQ0	C	e-106	cd01085, APP, X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also known
C5WXS3	S	6e-40	cd04852, Peptidases_S8_3, Peptidase S8 family domain,
C5XZT7	S	e-100	cd05472, cnd41_like, Chloroplast Nucleoids DNA-binding Protease,
C5YMU8	Y	0.0	PRK14015, pepN, aminopeptidase N; Provisional.
C5Z965	S	e-100	cd05472, cnd41_like, Chloroplast Nucleoids DNA-binding Protease,
C5XUF3	S	e-152	pfam00450, Peptidase_S10, Serine carboxypeptidase. 
C5X248	S	e-178	cd08017, M20_IAA_Hyd, M20 Peptidase Indole-3-acetic acid amino acid
C5WUS1	S	e-125	pfam00450, Peptidase_S10, Serine carboxypeptidase. 
C5Y6E1	S	e-139	pfam00450, Peptidase_S10, Serine carboxypeptidase. 
C5XFF8	-	0.0	cd06455, M3A_TOP, Peptidase M3 Thimet oligopeptidase (TOP) also
C5WZA4	-	3e-39	TIGR02227, Inactive_signal_peptidase_IA., signal peptidase I,
C5YEY2	N	4e-08	PLN03189, PLN03189, Protease specific for SMALL UBIQUITIN-RELATED
C5Y7C4	N	2e-07	cd02619, Peptidase_C1, C1 Peptidase family (MEROPS database
C5XS03	Y	1e-79	cd09616, Peptidase_C12_UCH_L1_L3, Cysteine peptidase C12 containing
C5YMW4	C	0.0	CHL00095, clpC, Clp protease ATP binding subunit.
C5YHN7	Y	3e-74	pfam10275, Peptidase_C65, Peptidase C65 Otubain.  This family of
C5XSY3	N	8e-92	pfam03568, Peptidase_C50, Peptidase family C50. 
C5WXN3	S	6e-39	pfam00450, Peptidase_S10, Serine carboxypeptidase. 
C5XZW7	S	4e-87	pfam00112, Peptidase_C1, Papain family cysteine protease. 
C5Y1N0	S	1e-73	PLN03146, PLN03146, aspartyl protease family protein; Provisional.
C5XZ65	S	2e-56	cd04278, ZnMc_MMP, Zinc-dependent metalloprotease, matrix
C5YAU8	C	3e-61	pfam09768, Peptidase_M76, Peptidase M76 family.  This is a family
C5Z2V8	S	3e-80	cd05472, cnd41_like, Chloroplast Nucleoids DNA-binding Protease,
C5WTX5	Y	e-174	cd08017, M20_IAA_Hyd, M20 Peptidase Indole-3-acetic acid amino acid
C5YJT5	N	3e-16	cd02619, Peptidase_C1, C1 Peptidase family (MEROPS database
C5YA35	S	e-103	pfam00112, Peptidase_C1, Papain family cysteine protease. 
C5WV27	-	e-172	cd09599, M1_LTA4H, Peptidase M1 family contains leukotriene A4
C5XZA0	T	8e-25	pfam01435, Peptidase_M48, Peptidase family M48. 
C5YB90	-	9e-09	TIGR02227, Inactive_signal_peptidase_IA., signal peptidase I,
C5XW28	N	2e-22	pfam02338, OTU, OTU-like cysteine protease.  This family is
C5Z1K2	S	5e-95	cd05472, cnd41_like, Chloroplast Nucleoids DNA-binding Protease,
C5YWY7	S	9e-92	cd05472, cnd41_like, Chloroplast Nucleoids DNA-binding Protease,
C5X485	T	4e-93	cd03875, M28_Fxna_like, M28 Zn-peptidase Endoplasmic reticulum
C5WUT7	N	e-142	cd02663, Peptidase_C19G, A subfamily of Peptidase C19. Peptidase
C5YRJ2	C	3e-88	PLN02209, PLN02209, serine carboxypeptidase.
C5XH66	C	9e-67	cd07017, S14_ClpP_2, Caseinolytic protease (ClpP) is an
C5XUB6	C	3e-11	COG0542, clpA, ATP-binding subunits of Clp protease and DnaK/DnaJ
C5Z1K3	S	8e-85	cd05472, cnd41_like, Chloroplast Nucleoids DNA-binding Protease,
C5YCH4	S	e-139	pfam00450, Peptidase_S10, Serine carboxypeptidase. 
C5Z0B7	-	2e-16	pfam00656, Peptidase_C14, Caspase domain. 
C5XVV1	Y	7e-79	PLN00049, PLN00049, carboxyl-terminal processing protease;
C5X290	M	e-111	COG1770, PtrB, Protease II [Amino acid transport and metabolism].
C5XAI1	S	e-125	pfam00450, Peptidase_S10, Serine carboxypeptidase. 
C5YBN2	S	4e-63	cd02248, Peptidase_C1A, Peptidase C1A subfamily (MEROPS database
C5WQK1	S	e-117	pfam00450, Peptidase_S10, Serine carboxypeptidase. 
C5XP87	S	e-151	pfam00450, Peptidase_S10, Serine carboxypeptidase. 
C5XVN1	-	e-137	cd02663, Peptidase_C19G, A subfamily of Peptidase C19. Peptidase
C5YA38	N	4e-26	pfam02338, OTU, OTU-like cysteine protease.  This family is
C5YCP0	-	8e-70	pfam00112, Peptidase_C1, Papain family cysteine protease. 
C5YSX0	S	3e-42	cd05472, cnd41_like, Chloroplast Nucleoids DNA-binding Protease,
C5Z5F3	-	6e-12	COG1770, PtrB, Protease II [Amino acid transport and metabolism].
C5Z955	S	1e-81	cd05472, cnd41_like, Chloroplast Nucleoids DNA-binding Protease,
C5WQY5	C	5e-11	CHL00095, clpC, Clp protease ATP binding subunit.
C5X3T3	S	e-101	cd05472, cnd41_like, Chloroplast Nucleoids DNA-binding Protease,
C5XQV3	S	5e-42	pfam04573, SPC22, Signal peptidase subunit.  Translocation of
C5XBY4	-	1e-79	cd04852, Peptidases_S8_3, Peptidase S8 family domain,
C5YN58	S	2e-63	pfam00450, Peptidase_S10, Serine carboxypeptidase. 
C5YFR0	C	0.0	COG0542, clpA, ATP-binding subunits of Clp protease and DnaK/DnaJ
C5YN65	P	7e-54	pfam04258, Peptidase_A22B, Signal peptide peptidase.  The members
C5YNA1	S	e-100	pfam00112, Peptidase_C1, Papain family cysteine protease. 
C5WXD7	S	9e-80	pfam04450, BSP, Peptidase of plants and bacteria.  These basic
C5WUD6	Y	8e-13	cd02257, Peptidase_C19, Peptidase C19 contains ubiquitinyl
C5XZR2	S	e-101	cd05472, cnd41_like, Chloroplast Nucleoids DNA-binding Protease,
C5WXN4	S	5e-27	pfam00450, Peptidase_S10, Serine carboxypeptidase. 
C5XIC7	S	6e-96	cd05472, cnd41_like, Chloroplast Nucleoids DNA-binding Protease,
C5YA39	S	3e-96	pfam00112, Peptidase_C1, Papain family cysteine protease. 
C5WQG8	V	2e-22	pfam06645, SPC12, Microsomal signal peptidase 12 kDa subunit
C5Y171	S	2e-85	pfam00112, Peptidase_C1, Papain family cysteine protease. 
C5Z4U4	-	2e-09	COG1506, DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases
C5WXD5	S	2e-71	pfam04450, BSP, Peptidase of plants and bacteria.  These basic
C5YIH2	S	e-141	pfam00450, Peptidase_S10, Serine carboxypeptidase. 
C5YRK0	-	9e-22	pfam10275, Peptidase_C65, Peptidase C65 Otubain.  This family of
C5YCZ0	S	e-125	pfam01650, Peptidase_C13, Peptidase C13 family.  Members of this
C5Z1J8	S	2e-93	cd05472, cnd41_like, Chloroplast Nucleoids DNA-binding Protease,
C5Z6S7	S	1e-50	pfam05577, Peptidase_S28, Serine carboxypeptidase S28.  These
C5Z7Q8	N	5e-23	pfam02338, OTU, OTU-like cysteine protease.  This family is
C5Y204	S	1e-83	pfam00450, Peptidase_S10, Serine carboxypeptidase. 
C5Z6S8	S	7e-59	pfam05577, Peptidase_S28, Serine carboxypeptidase S28.  These
C5X0N0	-	e-108	PLN03189, PLN03189, Protease specific for SMALL UBIQUITIN-RELATED
C5XTM3	N	2e-08	cd04852, Peptidases_S8_3, Peptidase S8 family domain,
C5Y684	S	3e-86	cd05475, nucellin_like, Nucellins, plant aspartic proteases
C5YMV1	Y	6e-79	cd09617, Peptidase_C12_UCH37_BAP1, Cysteine peptidase C12
C5WTV7	N	1e-46	pfam05903, Peptidase_C97, PPPDE putative peptidase domain.  The
C5XNV0	Y	9e-09	COG5160, ULP1, Protease, Ulp1 family [Posttranslational
C5YCP7	S	5e-94	pfam00112, Peptidase_C1, Papain family cysteine protease. 
C5XY66	C	e-109	PRK00277, clpP, ATP-dependent Clp protease proteolytic subunit;
C5YI39	S	2e-77	cd02248, Peptidase_C1A, Peptidase C1A subfamily (MEROPS database
C5X0T0	N	e-175	COG1025, Ptr, Secreted/periplasmic Zn-dependent peptidases,
C5Y4D0	S	e-103	pfam00112, Peptidase_C1, Papain family cysteine protease. 
C5YJK0	-	6e-14	COG0542, clpA, ATP-binding subunits of Clp protease and DnaK/DnaJ
C5XJS1	S	5e-83	pfam00450, Peptidase_S10, Serine carboxypeptidase. 
C5X5T3	S	1e-86	pfam00112, Peptidase_C1, Papain family cysteine protease. 
C5Y596	S	3e-81	cd04852, Peptidases_S8_3, Peptidase S8 family domain,
C5YTM6	S	e-145	pfam00450, Peptidase_S10, Serine carboxypeptidase.