Supplementary Table 4. Alternative splicing isoforms encoded proteins having different subcellular locations. Notations: C: chloroplast; ER: endoplasmic reticulum; M: mitochondrial; N: nuclear; K: cytoskeleton; P: plasma membrane; S: secreted; Y: cytosol; c81095_g1_i2(N) Ac2665(P) c83518_g1_i6(M) Ac78(Y) c86364_g2_i2(K) c86364_g2_i1(Y) c85694_g1_i2(S) c85694_g1_i1(N) Ac7217(S) Ac120(Y) c82677_g1_i3(M) c82677_g1_i5(N) c82677_g1_i4(Y) Ac5250(N) c87139_g1_i1(P) c75962_g1_i1(S) c75962_g1_i8(M) c83419_g1_i7(N) c83419_g1_i8(Y) c83419_g1_i7(N) c79633_g1_i2(M) Ac2311(N) c87307_g3_i8(Y_N) c87307_g3_i5(Y) c82786_g2_i3(P) c82786_g2_i1(S) c75869_g1_i5(M) c75869_g1_i1(K) c75869_g1_i1(K) c78400_g1_i3(N) c78400_g1_i1(M) c89194_g5_i5(Y) Ac6498(N) Ac4339(M) DT336396(Y) c64931_g1_i3(N) c64931_g1_i2(Y) c77540_g2_i1(N) c77540_g2_i2(Y) c73916_g1_i5(P) c73916_g1_i4(S) c73916_g1_i2(S) c83809_g1_i8(M) c83809_g1_i4(P) c83809_g1_i7(K) Ac6109(Y) c88583_g1_i2(K) c88583_g1_i3(K) Ac2272(Y) c79457_g1_i4(M) c82421_g1_i1(Y_N) c82421_g1_i3(K) c84498_g1_i5(Y) c84498_g1_i6(N) c84498_g1_i3(N) c56960_g1_i2(N) c56960_g1_i1(Y_N) c74400_g1_i6(M) Ac1529(Y) Ac1528(Y) Ac1529(Y) c85359_g1_i9(S) Ac4315(N) Ac3681(P) c83955_g1_i2(M) Ac2758(Y) c81386_g1_i4(Y_N) Ac6007(Y) c88399_g2_i4(M) Ac2626(N) c80960_g2_i7(Y) c76608_g1_i5(K) c76608_g1_i2(N) c76608_g1_i2(N) Ac2488(M) c80380_g1_i1(Y_N) c83581_g1_i2(Y) Ac3519(S) c85136_g1_i1(M) c85136_g1_i3(P) DT337717(K) Ac3142(P) Ac6577(M) Ac6578(Y) c85659_g1_i1(Y) Ac4462(M) c88185_g1_i1(P) c88185_g1_i6(N) c87047_g3_i5(N) c87047_g3_i4(M) c87196_g1_i12(N) c87196_g1_i5(M) c90251_g5_i1(K) c90251_g5_i6(Y) Ac5153(Y_N) c86969_g1_i8(Y) c85479_g1_i5(N) Ac4377(Y) c85479_g1_i4(Y) c85479_g1_i3(M) c88025_g1_i5(Y) c88025_g1_i2(M) c88953_g1_i2(P) c88953_g1_i6(S) c88953_g1_i5(P) c80707_g1_i1(Y_N) c80707_g1_i2(S) Ac5943(Y_N) JI407199.1(N) JI407199.1(N) c77872_g1_i3(M) c77872_g1_i2(K) c83918_g1_i6(P) c83918_g1_i5(N) c86161_g1_i7(N) c86161_g1_i5(S) c88528_g2_i3(N) c88528_g2_i6(M) c80535_g1_i4(M) Ac2525(N) Ac2525(N) Ac3305(Y) c83053_g1_i1(K) Ac5057(K) c86788_g4_i1(Y) c88778_g1_i6(K) c88778_g1_i5(M) Ac6040(P) c88458_g3_i2(M) c76016_g1_i2(M) c76016_g1_i1(Y) c76016_g1_i3(Y) c82000_g1_i1(M) c82000_g1_i4(P) c82000_g1_i6(M) c82000_g1_i5(P) c82000_g1_i4(P) c82000_g1_i5(P) c82000_g1_i6(M) Ac3162(Y) c82584_g1_i6(M) Ac7423(Y) Ac7422(Y_N) Ac7422(Y_N) Ac4654(Y) c86047_g1_i2(N) c81164_g1_i3(M) c81164_g1_i2(Y) c88001_g1_i4(golg) c88001_g1_i2(S) c82282_g1_i2(M) c82282_g1_i5(N) Ac140(E.R.) c83187_g2_i1(P) Ac2116(Y) c78675_g1_i5(Y_N) Ac2179(M) c78998_g1_i4(N) c81180_g1_i1(K) c81180_g1_i2(M) c88296_g5_i6(Y) c88296_g5_i1(N) c88296_g5_i4(N) c90578_g2_i4(N) c90578_g2_i6(M) Ac4181(Y_N) c85067_g1_i2(Y) c80756_g2_i4(K) c80756_g2_i3(N) c80756_g2_i1(K) c80756_g2_i3(N) c85319_g1_i2(M) c85319_g1_i5(Y) c82129_g1_i2(N) c82129_g1_i3(M) Ac3922(Y_M) c84508_g1_i8(Y) c84508_g1_i3(Y) Ac3922(Y_M) Ac437(N) c84870_g2_i4(M) c86544_g3_i4(M) c86544_g3_i3(N) Ac2621(Y) Ac2622(N) c80937_g1_i2(N) Ac6173(Y) c88692_g1_i7(M) c64539_g2_i4(K) Ac1169(Y) Ac245(Y) c79244_g1_i2(S) Ac2678(ER) c81133_g1_i3(N) Ac3020(N) c82181_g1_i3(Y_N) c76999_g1_i4(Y) c76999_g1_i3(M) Ac1847(M) c83750_g1_i3(M) Ac3590(Y_M) c76267_g2_i2(P) Ac1732(Y) Ac5545(Y) c87653_g1_i4(N) Ac6801(Y) c89629_g1_i5(M) c85316_g2_i1(M) c85316_g2_i8(Y_M) c85148_g1_i11(Y) c85148_g1_i6(Y_N) c84756_g2_i3(Y_N) c84756_g2_i5(M) Ac4599(N) Ac4600(M) Ac2171(N) c78955_g1_i1(Y) Ac2736(P) c81304_g1_i2(M) c78600_g1_i6(M_N) Ac2095(N) c84546_g1_i8(M) c84546_g1_i6(Y) c73082_g1_i1(K) c73082_g1_i4(N) c80547_g2_i2(N) c80547_g2_i4(M) Ac2527(M) Ac3319(Y) Ac3318(M) c87557_g1_i3(S) c87557_g1_i1(P) c89281_g1_i3(M) c89281_g1_i1(K) c90060_g2_i1(K) Ac7046(P) Ac3313(Y) c83078_g1_i4(M) c82418_g1_i5(Y) Ac3098(K) c89792_g2_i4(Y) c89792_g2_i3(Y_N) Ac2902(Y) c81779_g1_i5(Y_N) Ac6827(S) Ac6826(K) c86963_g1_i9(Y) c86963_g1_i6(N) c86963_g1_i5(N) Ac2119(pero) c78678_g2_i2(S) c83968_g2_i2(M) c83968_g2_i1(N) Ac5021(N) c86733_g1_i2(Y_N) c84476_g1_i3(M) Ac3905(N) c79892_g1_i2(Y_N) c79892_g1_i1(M) c78693_g1_i3(P) c78693_g1_i2(S) c87500_g1_i10(Y_N) c87500_g1_i4(N) c87500_g1_i10(Y_N) c73158_g1_i5(Y) c73158_g1_i3(K) Ac6255(Y_N) c88813_g2_i3(M) c88813_g2_i6(N) c82561_g1_i3(Y_M) Ac3152(M) Ac4144(P) c84998_g1_i2(Y) Ac4144(P) c84358_g1_i2(S) c84358_g1_i1(Y) c80256_g2_i2(Y_M) c80256_g2_i6(S) c88183_g4_i2(Y) c88183_g4_i3(Y_N) c88183_g4_i3(Y_N) c79913_g1_i2(Y) c79913_g1_i3(M) c84461_g1_i7(K) Ac3901(Y) Ac3900(Y) Ac1602(Y) DT336924(P) c82704_g3_i3(S) c82704_g3_i6(M) Ac5459(Y) Ac5458(K) Ac2739(M) c81323_g1_i2(Y) c81323_g1_i5(Y) c89105_g2_i6(M) Ac6434(Y) Ac2666(Y_M) c81098_g1_i1(M) Ac6475(M) c89171_g2_i4(P) c89171_g2_i3(P) Ac5327(P) c87268_g1_i4(S) Ac5328(S) c87683_g1_i2(Y) c87683_g1_i4(M) c78388_g1_i1(M) c78388_g1_i2(N) c84441_g2_i5(Y_N) c84441_g2_i1(S) Ac5125(S) c86927_g5_i3(P) c86927_g5_i2(S) c87391_g1_i3(Y_N) Ac837(K) c85768_g1_i1(Y_M) c85768_g1_i3(M) Ac4622(Y_N) c85965_g3_i4(N) Ac3252(Y) c82868_g2_i2(N) c80704_g2_i6(Y) Ac2569(P) Ac2569(P) c81397_g2_i6(P) c81397_g2_i1(M) c81397_g2_i2(M) c84619_g1_i2(N) c84619_g1_i1(Y_N) c89089_g3_i3(S) c89089_g3_i2(Y_N) Ac4081(Y) c84877_g3_i1(N) Ac5738(N) c87968_g1_i5(S) Ac3109(Y) Ac3108(M) c88776_g2_i1(N) Ac6230(Y_N) c73126_g1_i2(S) c73126_g1_i3(Y) Ac3761(M) c84136_g1_i2(Y_M) c76879_g2_i3(Y) Ac1825(M) c89090_g2_i3(Y) Ac6425(M) c84876_g1_i1(M) c84876_g1_i2(K) Ac4080(Y) c89031_g2_i5(M) c89031_g2_i4(Y_N) c79613_g1_i3(N) c79613_g1_i2(Y) Ac6083(Y_N) c88540_g2_i1(N) c85730_g1_i6(Y) c85730_g1_i4(N) c83430_g2_i3(Y) c83430_g2_i2(N) c88886_g1_i7(S) c88886_g1_i9(Y_N) c81135_g1_i6(N) c81135_g1_i3(Y) c75447_g3_i1(Y_M) c75447_g3_i3(M) Ac3401(Y) c83294_g1_i7(Y_N) c89062_g1_i5(E.R.) c89062_g1_i3(M) Ac1540(K) c74606_g1_i3(M) c84078_g1_i1(N) c84078_g1_i5(K) Ac3255(M) c82874_g1_i7(P) c90626_g1_i1(N) DT338422(Y) c83760_g1_i1(N) c83760_g1_i4(M) c88557_g1_i8(Y) Ac6094(K) c88557_g1_i4(K) c83495_g1_i3(N) c83495_g1_i1(Y_N) c83557_g1_i1(golg) Ac3510(S) c82070_g3_i1(N) c82070_g3_i3(Y) Ac2655(S) c81069_g1_i12(N) Ac660(N) Ac3803(Y_N) DT336506(Y) c78252_g1_i1(M) c78252_g1_i2(K) c85525_g1_i3(Y) c85525_g1_i2(M) c81794_g2_i8(Y) c81794_g2_i3(N) c82924_g2_i3(N) c82924_g2_i4(M) Ac3679(Y) Ac3678(P) c84348_g1_i5(P) Ac3856(S) Ac4049(K) c84808_g1_i2(Y) c75292_g1_i5(Y) Ac1623(M) Ac6607(Y) Ac420(Y_N) Ac6026(Y_N) c88437_g3_i1(K) Ac3876(N) Ac3877(M) c81627_g1_i9(P) Ac2851(K) Ac4547(Y) c85824_g1_i1(S) Ac3757(K) c84129_g1_i8(Y) c76786_g2_i2(Y_N) Ac1812(N) c86686_g4_i3(P) c86686_g4_i1(S) c86686_g4_i3(P) Ac2833(Y) c81590_g1_i1(M) c82059_g2_i4(K) Ac2983(N) c89221_g2_i2(Y_N) c89221_g2_i1(N) c80133_g1_i3(N) c80133_g1_i2(Y) CO731709(P) Ac5079(N) c88967_g1_i3(Y_N) c88967_g1_i1(Y) Ac3656(Y) Ac3655(P) c80275_g1_i3(N) c80275_g1_i4(E.R.) Ac1093(P) Ac1094(S) c89362_g5_i6(Y_N) c89362_g5_i2(M) c79990_g1_i5(M_N) c79990_g1_i8(S) c86557_g1_i2(Y_N) c86557_g1_i1(Y) c81757_g1_i4(Y) c81757_g1_i1(N) c82365_g1_i6(N) c82365_g1_i7(Y_N) c86419_g1_i1(Y) c86419_g1_i4(P) c86419_g1_i5(P) c85173_g1_i3(Y_N) c85173_g1_i2(Y) Ac4838(Y) c86387_g1_i7(M) c86387_g1_i6(M) c74124_g1_i1(Y_M) c74124_g1_i5(Y) c74124_g1_i5(Y) c77791_g1_i7(N) c77791_g1_i4(P) Ac3300(M) Ac3299(E.R.) c83485_g2_i1(E.R.) c83485_g2_i3(Y_N) c76151_g1_i4(N) c76151_g1_i2(Y) c76151_g1_i3(N) c86469_g1_i12(Y) c86469_g1_i8(N) Ac1194(N) c82140_g1_i3(Y_N) c82140_g1_i1(N) Ac5837(Y) c88121_g3_i4(M) c79860_g1_i2(M) c79860_g1_i3(S) DT338396(M) c77812_g1_i7(Y) c74072_g1_i2(Y) c74072_g1_i3(M) c82625_g1_i2(Y) c82625_g1_i4(M) c86424_g1_i6(S) c86424_g1_i1(Y) c86424_g1_i8(Y) Ac2186(S) c79033_g2_i4(P) c87045_g1_i1(Y) c87045_g1_i4(M) c87045_g1_i3(Y) c87045_g1_i9(Y) Ac2939(Y) c81911_g1_i1(Y_N) c80560_g1_i4(Y) c80560_g1_i6(M) c85859_g1_i1(Y) c85859_g1_i7(N) c88635_g3_i5(Y) c88635_g3_i6(M) Ac6953(N) c89889_g2_i3(M) c80436_g1_i1(Y_M) c80436_g1_i2(N) c88550_g1_i2(N) Ac6089(M) c88550_g1_i1(M) c89306_g2_i2(N) c89306_g2_i10(Y_N) c88076_g1_i9(Y_N) c88076_g1_i4(Y) Ac4067(N) c84840_g1_i1(Y) Ac4774(N) Ac4775(Y_N) c90006_g1_i2(S) c90006_g1_i1(K) c85672_g1_i1(N) c85672_g1_i4(Y) Ac3649(Y_N) c83887_g1_i2(Y) c79293_g1_i2(Y_N) c79293_g1_i5(N) c79293_g1_i1(N) c90006_g2_i4(P) c90006_g2_i2(M) c89147_g1_i1(M) c89147_g1_i3(K) c89147_g1_i4(Y) c89147_g1_i6(Y) c81992_g1_i2(N) c81992_g1_i1(M) Ac5641(M) c87798_g1_i1(N) c68416_g1_i1(P) c68416_g1_i3(K) c86442_g3_i8(Y) Ac4871(M) Ac372(Y) c84207_g1_i4(Y_M) c80257_g1_i1(M) Ac2459(Y_N) c80257_g1_i2(M) Ac5292(M) c87202_g1_i1(N) Ac5585(M) c87714_g4_i6(S) Ac3003(N) c82120_g1_i6(Y) c82120_g1_i6(Y) Ac7191(Y_N) c90269_g2_i3(N) c83308_g2_i5(N) Ac2400(Y_N) c83308_g2_i3(N) Ac2400(Y_N) c80575_g1_i4(Y) c80575_g1_i2(N) c83520_g1_i2(K) Ac3496(N) c83520_g1_i6(N) c88720_g1_i4(N) c88720_g1_i3(Y) c85641_g1_i7(M) c85641_g1_i6(Y) c88008_g1_i4(M) Ac5759(Y) Ac5760(Y) c79237_g1_i6(Y) Ac2229(Y_N) c81711_g2_i2(Y) c81711_g2_i3(N) c84880_g1_i3(N) c84880_g1_i5(M) c88488_g2_i6(P) c88488_g2_i7(Y) c84902_g1_i5(Y_N) c84902_g1_i8(N) c84902_g1_i3(N) Ac1987(Y_N) Ac1986(Y) c78016_g1_i3(Y_N) Ac1986(Y) c86182_g1_i1(N) c86182_g1_i2(Y) c86182_g1_i1(N) Ac4628(Y) c85985_g1_i8(S) Ac5645(N) c87804_g1_i6(Y_N) Ac3500(P) c83528_g1_i1(N) Ac4290(Y) c85326_g2_i3(N) c82775_g1_i4(Y_N) Ac3221(Y) Ac5720(M) c87944_g1_i1(Y) c82814_g2_i1(Y) c82814_g2_i4(M) c60186_g1_i1(M) c60186_g1_i2(S) c85469_g2_i1(M) Ac4370(Y) c85469_g2_i1(M) JI409111.1(Y) c87490_g1_i13(M) c87490_g1_i7(Y) Ac6650(S) c89422_g1_i6(P) c90514_g1_i3(K) c90514_g1_i2(P) c82989_g1_i3(N) c82989_g1_i1(Y) Ac3881(Y) Ac3880(N) c85665_g3_i3(M) c85665_g3_i5(Y) c87568_g4_i3(Y) c87568_g4_i1(Y_N) c81791_g1_i2(Y_N) c81791_g1_i1(golg) Ac3426(P) c83344_g1_i4(M) c78312_g1_i5(N) c78312_g1_i2(M) c79347_g1_i2(M) c79347_g1_i1(Y) c82695_g2_i2(Y) c82695_g2_i4(M) c88930_g3_i3(N) c88930_g3_i2(Y) c83161_g1_i4(M) c83161_g1_i6(N) c83161_g1_i6(N) c88493_g3_i7(S) c88493_g3_i1(N) c83449_g1_i3(S) c83449_g1_i1(M) Ac2086(M) c78573_g1_i2(K) c81439_g1_i2(P) c81439_g1_i5(M) c78332_g1_i1(M) c78332_g1_i2(K) c82503_g1_i6(Y_N) c82503_g1_i2(Y) c82503_g1_i2(Y) Ac2814(M) c81539_g2_i4(P) c83044_g1_i1(M) c83044_g1_i3(Y) c86867_g1_i3(M) Ac5096(P) Ac4770(Y) c86251_g1_i2(N) c84729_g1_i4(S) c84729_g1_i1(M) Ac1266(Y_N) c69250_g1_i3(M) c78144_g1_i2(M) Ac2007(N) Ac2009(M) Ac2007(N) c81796_g1_i1(K) c81796_g1_i2(M) Ac6793(M) Ac6792(Y) c83264_g1_i8(Y) Ac3386(M) c88523_g1_i5(Y) c88523_g1_i4(P) c85580_g1_i2(M) c85580_g1_i3(N) c84496_g1_i5(Y_N) c84496_g1_i4(K) Ac2342(Y) Ac2343(M) c77815_g1_i5(S) Ac1960(Y_N) Ac6886(M) CO731872(Y) c80022_g1_i1(M) c80022_g1_i3(N) c87093_g2_i4(M) c87093_g2_i3(Y) c88702_g1_i5(Y) c88702_g1_i9(N) c77650_g1_i2(N) c77650_g1_i4(S) Ac3116(M) c82470_g1_i2(Y) Ac2187(Y) c79033_g3_i2(M_N) c88698_g4_i8(N) c88698_g4_i4(S) c87346_g2_i2(Y) c87346_g2_i4(S) c89683_g1_i2(M) c89683_g1_i1(N) c79456_g1_i1(M) c79456_g1_i3(Y_N) c87742_g1_i2(P) c87742_g1_i3(S) c81440_g1_i1(Y) c81440_g1_i2(N) c88635_g3_i4(M) c88635_g3_i2(N) Ac3936(Y) Ac3935(N) DT336015(K) c71255_g1_i1(M) Ac2741(K) c81329_g1_i4(Y) c84562_g5_i1(P) Ac3944(M) Ac3115(Y_N) c82466_g1_i3(N) Ac2796(Y) c81481_g2_i4(M) c88083_g1_i1(Y) Ac5817(N) Ac3953(K) c84586_g2_i5(M) Ac2146(M) FJ645911.1(K) Ac2378(N) c79900_g1_i3(Y_M) DT337647(Y_N) c89730_g2_i6(N) c81949_g1_i4(N) c81949_g1_i3(P) c79927_g1_i9(Y) c79927_g1_i5(N) c79927_g1_i8(Y_N) Ac3042(Y) Ac3043(Y_N) Ac3043(Y_N) c85083_g1_i1(Y) Ac4186(Y_N) c83564_g1_i2(M) c83564_g1_i1(Y) Ac5049(M) Ac5048(N) Ac6290(Y) c88878_g1_i5(K) Ac2716(P) Ac2715(M) c89412_g2_i1(P) c89412_g2_i4(N) Ac5926(M) c88267_g1_i1(N) c82994_g2_i5(Y) c82994_g2_i4(M) c82747_g2_i5(Y) DT339015(S) c79828_g1_i3(K) c79828_g1_i2(S) c85546_g1_i5(M) c85546_g1_i4(N) c78343_g1_i9(P) Ac2045(S) Ac5866(Y) c88159_g1_i2(N) Ac1359(N) c71939_g1_i2(Y_N) Ac3636(S) c83859_g3_i1(Y) Ac2072(N) c78522_g1_i5(M) Ac2155(M) c78840_g1_i2(Y) c77248_g1_i4(S) c77248_g1_i3(N) Ac2768(M) Ac2767(P) Ac2767(P) c86654_g5_i3(N) Ac4987(Y_N) Ac4987(Y_N) Ac5856(S) c88147_g2_i3(M) c79435_g1_i2(N) Ac2264(M) c82489_g1_i2(Y) c82489_g1_i7(M) c84598_g1_i5(S) Ac3957(M) c85603_g7_i4(S) Ac4434(Y) Ac4286(M) c85320_g1_i1(Y) c85969_g1_i4(M) c85969_g1_i3(N) c89148_g5_i2(Y) c89148_g5_i4(S) c86654_g4_i3(N) Ac4988(Y) Ac3807(M) c84243_g2_i2(N) c89305_g1_i5(P) c89305_g1_i3(Y) c85040_g3_i2(N) Ac4165(Y_N) c84682_g1_i1(S) Ac3990(N) c84636_g1_i2(Y_N) c84636_g1_i3(N) c83291_g1_i2(K) c83291_g1_i4(M) c83291_g1_i10(K) c79345_g1_i1(S) c79345_g1_i4(N) Ac3403(N) c83298_g1_i8(M) Ac6712(M) Ac6713(Y_N) c87668_g2_i3(Y) c87668_g2_i6(P) c89746_g4_i4(Y_N) c89746_g4_i7(N)