Supplementary Table 1. Protein family (Pfam) distribution in cotton ID Total AS Gene % Pfam Pfam description pfam00078 3419 470 13.7 RVT_1 Reverse transcriptase (RNA-dependent DNA pfam00069 1538 590 38.4 Pkinase Protein kinase domain pfam07727 1201 142 11.8 RVT_2 Reverse transcriptase (RNA-dependent DNA pfam08284 1191 43 3.6 RVP_2 Retroviral aspartyl protease pfam03732 1049 220 21.0 Retrotrans_gag Retrotransposon gag protein pfam07714 1014 326 32.1 Pkinase_Tyr Protein tyrosine kinase pfam13041 667 191 28.6 PPR_2 PPR repeat family pfam00067 655 108 16.5 p450 Cytochrome P450 pfam00931 531 108 20.3 NB-ARC NB-ARC domain pfam13639 520 174 33.5 zf-RING_2 Ring finger domain pfam14223 485 42 8.7 UBN2 gag-polypeptide of LTR copia-type pfam13456 445 62 13.9 RVT_3 Reverse transcriptase-like pfam00249 428 127 29.7 Myb_DNA-binding Myb-like DNA-binding domain pfam00076 410 233 56.8 RRM_1 RNA recognition motif pfam13976 398 13 3.3 gag_pre-integrs GAG-pre-integrase domain pfam00847 354 40 11.3 AP2 AP2 domain pfam12776 292 143 49.0 Myb_DNA-bind_3 Myb/SANT-like DNA-binding domain pfam13359 254 33 13.0 DDE_Tnp_4 DDE superfamily endonuclease pfam03171 251 70 27.9 2OG-FeII_Oxy 2OG-Fe(II) oxygenase superfamily pfam00201 240 27 11.3 UDPGT UDP-glucoronosyl and UDP-glucosyl transferase pfam00481 226 108 47.8 PP2C Protein phosphatase 2C pfam02365 221 86 38.9 NAM No apical meristem (NAM) protein pfam00071 216 75 34.7 Ras Ras family pfam03106 200 74 37.0 WRKY WRKY DNA -binding domain pfam00010 193 77 39.9 HLH Helix-loop-helix DNA-binding domain pfam10536 190 17 8.9 PMD Plant mobile domain pfam00153 187 66 35.3 Mito_carr Mitochondrial carrier protein pfam13966 186 52 28.0 zf-RVT zinc-binding in reverse transcriptase pfam13499 186 48 25.8 EF-hand_7 EF-hand domain pair pfam02519 185 24 13.0 Auxin_inducible Auxin responsive protein pfam00141 178 47 26.4 peroxidase Peroxidase pfam12796 175 54 30.9 Ank_2 Ankyrin repeats (3 copies) pfam14432 175 32 18.3 DYW_deaminase DYW family of nucleic acid deaminases pfam00106 171 49 28.7 adh_short short chain dehydrogenase pfam00004 168 56 33.3 AAA ATPase family associated with various cellular pfam00083 164 66 40.2 Sugar_tr Sugar (and other) transporter pfam02458 162 15 9.3 Transferase Transferase family pfam00665 160 25 15.6 rve Integrase core domain pfam00225 159 75 47.2 Kinesin Kinesin motor domain pfam03004 158 80 50.6 Transposase_24 Plant transposase (Ptta/En/Spm family) pfam14244 155 72 46.5 UBN2_3 gag-polypeptide of LTR copia-type pfam01095 155 20 12.9 Pectinesterase Pectinesterase pfam00657 150 30 20.0 Lipase_GDSL GDSL-like Lipase/Acylhydrolase pfam00270 149 70 47.0 DEAD DEAD/DEAH box helicase pfam03514 147 46 31.3 GRAS GRAS domain family pfam00561 147 45 30.6 Abhydrolase_1 alpha/beta hydrolase fold pfam00226 146 58 39.7 DnaJ DnaJ domain pfam00179 143 85 59.4 UQ_con Ubiquitin-conjugating enzyme pfam00854 139 44 31.7 PTR2 POT family pfam13855 137 29 21.2 LRR_8 Leucine rich repeat pfam04564 136 35 25.7 U-box U-box domain pfam01582 135 44 32.6 TIR TIR domain pfam01554 129 39 30.2 MatE MatE pfam00168 127 42 33.1 C2 C2 domain pfam00295 127 30 23.6 Glyco_hydro_28 Glycosyl hydrolases family 28 pfam13839 124 29 23.4 PC-Esterase GDSL/SGNH-like Acyl-Esterase family found pfam00046 121 37 30.6 Homeobox Homeobox domain pfam01490 121 37 30.6 Aa_trans Transmembrane amino acid transporter protein pfam00005 120 37 30.8 ABC_tran ABC transporter pfam05699 119 53 44.5 Dimer_Tnp_hAT hAT family C-terminal dimerization pfam04043 119 7 5.9 PMEI Plant invertase/pectin methylesterase inhibitor pfam00501 117 31 26.5 AMP-binding AMP-binding enzyme pfam00332 117 27 23.1 Glyco_hydro_17 Glycosyl hydrolases family 17 pfam10250 112 49 43.8 O-FucT GDP-fucose protein O-fucosyltransferase pfam00400 111 45 40.5 WD40 WD domain pfam02362 110 47 42.7 B3 B3 DNA binding domain pfam03195 110 19 17.3 DUF260 Protein of unknown function DUF260 pfam00085 107 33 30.8 Thioredoxin Thioredoxin pfam00230 106 35 33.0 MIP Major intrinsic protein pfam01501 106 28 26.4 Glyco_transf_8 Glycosyl transferase family 8 pfam00319 105 28 26.7 SRF-TF SRF-type transcription factor (DNA-binding and pfam03018 105 9 8.6 Dirigent Dirigent-like protein pfam00248 104 44 42.3 Aldo_ket_red Aldo/keto reductase family pfam13414 104 32 30.8 TPR_11 TPR repeat pfam03151 103 28 27.2 TPT Triose-phosphate Transporter family pfam14226 103 25 24.3 DIOX_N non-haem dioxygenase in morphine synthesis pfam08263 103 20 19.4 LRRNT_2 Leucine rich repeat N-terminal domain pfam01370 102 28 27.5 Epimerase NAD dependent epimerase/dehydratase family pfam07732 102 23 22.5 Cu-oxidase_3 Multicopper oxidase pfam00170 101 32 31.7 bZIP_1 bZIP transcription factor pfam03552 100 39 39.0 Cellulose_synt Cellulose synthase pfam02701 99 41 41.4 zf-Dof Dof domain pfam00190 99 10 10.1 Cupin_1 Cupin pfam01061 98 22 22.4 ABC2_membrane ABC-2 type transporter pfam06203 94 42 44.7 CCT CCT motif pfam02992 94 15 16.0 Transposase_21 Transposase family tnp2 pfam13962 94 15 16.0 PGG Domain of unknown function pfam00462 94 13 13.8 Glutaredoxin Glutaredoxin pfam02298 94 8 8.5 Cu_bind_like Plastocyanin-like domain pfam00892 91 32 35.2 EamA EamA-like transporter family pfam03372 91 28 30.8 Exo_endo_phos Endonuclease/Exonuclease/phosphatase pfam00134 90 44 48.9 Cyclin_N Cyclin pfam00072 90 33 36.7 Response_reg Response regulator receiver domain pfam03016 90 22 24.4 Exostosin Exostosin family pfam13837 89 33 37.1 Myb_DNA-bind_4 Myb/SANT-like DNA-binding domain pfam04535 89 24 27.0 DUF588 Domain of unknown function (DUF588) pfam00999 89 23 25.8 Na_H_Exchanger Sodium/hydrogen exchanger family pfam01764 89 17 19.1 Lipase_3 Lipase (class 3) pfam00139 89 15 16.9 Lectin_legB Legume lectin domain pfam14009 89 10 11.2 DUF4228 Domain of unknown function (DUF4228) pfam00155 88 22 25.0 Aminotran_1_2 Aminotransferase class I and II pfam00403 87 25 28.7 HMA Heavy-metal-associated domain pfam02309 85 37 43.5 AUX_IAA AUX/IAA family pfam02485 85 33 38.8 Branch Core-2/I-Branching enzyme pfam03479 85 30 35.3 DUF296 Domain of unknown function (DUF296) pfam00450 85 25 29.4 Peptidase_S10 Serine carboxypeptidase pfam00240 84 32 38.1 ubiquitin Ubiquitin family pfam14111 84 4 4.8 DUF4283 Domain of unknown function (DUF4283) pfam00011 83 12 14.5 HSP20 Hsp20/alpha crystallin family pfam02536 82 29 35.4 mTERF mTERF pfam03000 80 37 46.3 NPH3 NPH3 family pfam00314 80 19 23.8 Thaumatin Thaumatin family pfam00176 79 47 59.5 SNF2_N SNF2 family N-terminal domain pfam00118 79 26 32.9 Cpn60_TCP1 TCP-1/cpn60 chaperonin family pfam00650 78 50 64.1 CRAL_TRIO CRAL/TRIO domain pfam01565 78 8 10.3 FAD_binding_4 FAD binding domain pfam00025 77 43 55.8 Arf ADP-ribosylation factor family pfam03141 77 33 42.9 Methyltransf_29 Putative pfam00160 76 28 36.8 Pro_isomerase Cyclophilin type peptidyl-prolyl pfam03140 76 8 10.5 DUF247 Plant protein of unknown function pfam13920 75 26 34.7 zf-C3HC4_3 Zinc finger pfam00082 75 22 29.3 Peptidase_S8 Subtilase family pfam00112 75 22 29.3 Peptidase_C1 Papain family cysteine protease pfam07859 74 18 24.3 Abhydrolase_3 alpha/beta hydrolase fold pfam00149 73 38 52.1 Metallophos Calcineurin-like phosphoesterase pfam01357 72 31 43.1 Pollen_allerg_1 Pollen allergen pfam00227 72 25 34.7 Proteasome Proteasome subunit pfam00125 72 19 26.4 Histone Core histone H2A/H2B/H3/H4 pfam03936 72 9 12.5 Terpene_synth_C Terpene synthase family pfam13417 71 21 29.6 GST_N_3 Glutathione S-transferase pfam04937 70 60 85.7 DUF659 Protein of unknown function (DUF 659) pfam00443 69 40 58.0 UCH Ubiquitin carboxyl-terminal hydrolase pfam00582 69 31 44.9 Usp Universal stress protein family pfam14541 68 15 22.1 TAXi_C Xylanase inhibitor C-terminal pfam00447 67 33 49.3 HSF_DNA-bind HSF-type DNA-binding pfam00320 67 29 43.3 GATA GATA zinc finger pfam03087 67 3 4.5 DUF241 Arabidopsis protein of unknown function pfam12937 66 27 40.9 F-box-like F-box-like pfam00407 65 8 12.3 Bet_v_1 Pathogenesis-related protein Bet v I family pfam00012 64 20 31.3 HSP70 Hsp70 protein pfam03321 64 18 28.1 GH3 GH3 auxin-responsive promoter pfam06507 63 35 55.6 Auxin_resp Auxin response factor pfam00566 63 34 54.0 RabGAP-TBC Rab-GTPase-TBC domain pfam00808 63 24 38.1 CBFD_NFYB_HMF Histone-like transcription factor pfam04398 63 18 28.6 DUF538 Protein of unknown function pfam00685 63 2 3.2 Sulfotransfer_1 Sulfotransferase domain pfam00091 61 32 52.5 Tubulin Tubulin/FtsZ family pfam01344 61 30 49.2 Kelch_1 Kelch motif pfam10551 61 16 26.2 MULE MULE transposase domain pfam00022 60 23 38.3 Actin Actin pfam01657 60 14 23.3 Stress-antifung Salt stress response/antifungal pfam00504 60 11 18.3 Chloroa_b-bind Chlorophyll A-B binding protein pfam02181 59 27 45.8 FH2 Formin Homology 2 Domain pfam14543 59 15 25.4 TAXi_N Xylanase inhibitor N-terminal pfam00122 58 30 51.7 E1-E2_ATPase E1-E2 ATPase pfam01529 58 28 48.3 zf-DHHC DHHC palmitoyltransferase pfam00171 58 24 41.4 Aldedh Aldehyde dehydrogenase family pfam00722 58 22 37.9 Glyco_hydro_16 Glycosyl hydrolases family 16 pfam03634 58 21 36.2 TCP TCP family transcription factor pfam07690 58 15 25.9 MFS_1 Major Facilitator Superfamily pfam05922 58 12 20.7 Inhibitor_I9 Peptidase inhibitor I9 pfam00234 58 8 13.8 Tryp_alpha_amyl Protease inhibitor/seed storage/LTP pfam01190 58 8 13.8 Pollen_Ole_e_I Pollen proteins Ole e I like pfam00544 58 4 6.9 Pec_lyase_C Pectate lyase pfam00223 58 0 0.0 PsaA_PsaB Photosystem I psaA/psaB protein pfam00293 57 32 56.1 NUDIX NUDIX domain pfam07983 57 14 24.6 X8 X8 domain pfam01486 56 31 55.4 K-box K-box region pfam13912 56 19 33.9 zf-C2H2_6 C2H2-type zinc finger pfam14215 55 30 54.5 bHLH-MYC_N bHLH-MYC and R2R3-MYB transcription factors pfam14372 55 18 32.7 DUF4413 Domain of unknown function (DUF4413) pfam05758 55 7 12.7 Ycf1 Ycf1 pfam04844 55 2 3.6 Ovate Transcriptional repressor pfam00009 54 31 57.4 GTP_EFTU Elongation factor Tu GTP binding domain pfam03083 54 18 33.3 MtN3_slv Sugar efflux transporter for intercellular pfam01852 53 44 83.0 START START domain pfam16363 53 31 58.5 GDP_Man_Dehyd GDP-mannose 4 pfam14547 53 6 11.3 Hydrophob_seed Hydrophobic seed protein pfam00013 52 28 53.8 KH_1 KH domain pfam08241 52 26 50.0 Methyltransf_11 Methyltransferase domain pfam04570 52 20 38.5 zf-FLZ zinc-finger of the FCS-type pfam03168 52 16 30.8 LEA_2 Late embryogenesis abundant protein pfam03110 51 28 54.9 SBP SBP domain pfam07992 51 20 39.2 Pyr_redox_2 Pyridine nucleotide-disulphide pfam00856 51 19 37.3 SET SET domain pfam01423 51 19 37.3 LSM LSM domain pfam08392 51 15 29.4 FAE1_CUT1_RppA FAE1/Type III polyketide synthase-like pfam02990 50 24 48.0 EMP70 Endomembrane protein 70 pfam12819 50 15 30.0 Malectin_like Carbohydrate-binding protein of the ER pfam00651 49 25 51.0 BTB BTB/POZ domain pfam00564 49 21 42.9 PB1 PB1 domain pfam14144 49 19 38.8 DOG1 Seed dormancy control pfam03154 49 10 20.4 Atrophin-1 Atrophin-1 family pfam14309 48 25 52.1 DUF4378 Domain of unknown function (DUF4378) pfam05641 48 24 50.0 Agenet Agenet domain pfam02463 48 22 45.8 SMC_N RecF/RecN/SMC N terminal domain pfam04749 48 15 31.3 PLAC8 PLAC8 family pfam03094 48 12 25.0 Mlo Mlo family pfam00891 48 10 20.8 Methyltransf_2 O-methyltransferase pfam00361 48 6 12.5 Proton_antipo_M Proton-conducting membrane transporter pfam01412 47 31 66.0 ArfGap Putative GTPase activating protein for Arf pfam07526 47 25 53.2 POX Associated with HOX pfam00642 47 18 38.3 zf-CCCH Zinc finger C-x8-C-x5-C-x3-H type (and pfam03081 47 10 21.3 Exo70 Exo70 exocyst complex subunit pfam00664 46 14 30.4 ABC_membrane ABC transporter transmembrane region pfam08240 46 10 21.7 ADH_N Alcohol dehydrogenase GroES-like domain pfam01694 45 29 64.4 Rhomboid Rhomboid family pfam00439 45 28 62.2 Bromodomain Bromodomain pfam01399 45 22 48.9 PCI PCI domain pfam01602 45 16 35.6 Adaptin_N Adaptin N terminal region pfam05553 45 5 11.1 DUF761 Cotton fibre expressed protein pfam01556 44 16 36.4 DnaJ_C DnaJ C terminal domain pfam10604 44 16 36.4 Polyketide_cyc2 Polyketide cyclase / dehydrase and pfam01734 44 14 31.8 Patatin Patatin-like phospholipase pfam00177 44 6 13.6 Ribosomal_S7 Ribosomal protein S7p/S5e pfam13947 44 4 9.1 GUB_WAK_bind Wall-associated receptor kinase pfam12906 43 31 72.1 RINGv RING-variant domain pfam07059 43 25 58.1 DUF1336 Protein of unknown function (DUF1336) pfam04147 43 22 51.2 Nop14 Nop14-like family pfam02705 43 21 48.8 K_trans K+ potassium transporter pfam00291 43 20 46.5 PALP Pyridoxal-phosphate dependent enzyme pfam01762 43 18 41.9 Galactosyl_T Galactosyltransferase pfam00583 43 14 32.6 Acetyltransf_1 Acetyltransferase (GNAT) family pfam01546 43 12 27.9 Peptidase_M20 Peptidase family M20/M25/M40 pfam00534 43 11 25.6 Glycos_transf_1 Glycosyl transferases group 1 pfam00759 43 10 23.3 Glyco_hydro_9 Glycosyl hydrolase family 9 pfam00173 42 15 35.7 Cyt-b5 Cytochrome b5-like Heme/Steroid binding pfam02535 42 14 33.3 Zip ZIP Zinc transporter pfam06814 42 14 33.3 Lung_7-TM_R Lung seven transmembrane receptor pfam04640 42 12 28.6 PLATZ PLATZ transcription factor pfam04525 42 11 26.2 LOR LURP-one-related pfam06813 42 9 21.4 Nodulin-like Nodulin-like pfam04770 42 8 19.0 ZF-HD_dimer ZF-HD protein dimerization region pfam14299 42 8 19.0 PP2 Phloem protein 2 pfam02466 41 18 43.9 Tim17 Tim17/Tim22/Tim23/Pmp24 family pfam06749 41 12 29.3 DUF1218 Protein of unknown function (DUF1218) pfam00294 41 9 22.0 PfkB pfkB family carbohydrate kinase pfam05678 41 6 14.6 VQ VQ motif pfam01453 41 3 7.3 B_lectin D-mannose binding lectin pfam00385 41 0 0.0 Chromo Chromo (CHRromatin Organization MOdifier) pfam00574 40 30 75.0 CLP_protease Clp protease pfam01553 40 29 72.5 Acyltransferase Acyltransferase pfam14259 40 28 70.0 RRM_6 RNA recognition motif (a pfam03101 40 23 57.5 FAR1 FAR1 DNA-binding domain pfam00957 40 19 47.5 Synaptobrevin Synaptobrevin pfam00464 40 17 42.5 SHMT Serine hydroxymethyltransferase pfam01603 40 16 40.0 B56 Protein phosphatase 2A regulatory B subunit (B56 pfam00254 40 15 37.5 FKBP_C FKBP-type peptidyl-prolyl cis-trans isomerase pfam01248 40 11 27.5 Ribosomal_L7Ae Ribosomal protein L7Ae/L30e/S12e/Gadd45 pfam07651 40 11 27.5 ANTH ANTH domain pfam01699 40 9 22.5 Na_Ca_ex Sodium/calcium exchanger protein pfam14368 40 9 22.5 LTP_2 Probable lipid transfer pfam00232 40 7 17.5 Glyco_hydro_1 Glycosyl hydrolase family 1 pfam03547 40 6 15.0 Mem_trans Membrane transport protein pfam00454 39 16 41.0 PI3_PI4_kinase Phosphatidylinositol 3- and 4-kinase pfam02704 39 16 41.0 GASA Gibberellin regulated protein pfam02201 39 13 33.3 SWIB SWIB/MDM2 domain pfam11721 39 13 33.3 Malectin Di-glucose binding within endoplasmic pfam01301 39 9 23.1 Glyco_hydro_35 Glycosyl hydrolases family 35 pfam00704 39 6 15.4 Glyco_hydro_18 Glycosyl hydrolases family 18 pfam02453 38 26 68.4 Reticulon Reticulon pfam10358 38 16 42.1 NT-C2 N-terminal C2 in EEIG1 and EHBP1 proteins pfam13178 38 14 36.8 DUF4005 Protein of unknown function (DUF4005) pfam00903 38 13 34.2 Glyoxalase Glyoxalase/Bleomycin resistance pfam03662 38 12 31.6 Glyco_hydro_79n Glycosyl hydrolase family 79 pfam02798 38 11 28.9 GST_N Glutathione S-transferase pfam03031 38 11 28.9 NIF NLI interacting factor-like phosphatase pfam13921 38 10 26.3 Myb_DNA-bind_6 Myb-like DNA-binding domain pfam00182 38 9 23.7 Glyco_hydro_19 Chitinase class I pfam00743 38 6 15.8 FMO-like Flavin-binding monooxygenase-like pfam00888 37 27 73.0 Cullin Cullin family pfam14379 37 24 64.9 Myb_CC_LHEQLE MYB-CC type transfactor pfam00520 37 23 62.2 Ion_trans Ion transport protein pfam16135 37 22 59.5 Jas TPL-binding domain in jasmonate signalling pfam01823 37 21 56.8 MACPF MAC/Perforin domain pfam03357 37 21 56.8 Snf7 Snf7 pfam06886 37 16 43.2 TPX2 Targeting protein for Xklp2 (TPX2) pfam08879 37 16 43.2 WRC WRC pfam01031 37 12 32.4 Dynamin_M Dynamin central region pfam07765 37 12 32.4 KIP1 KIP1-like protein pfam04852 37 11 29.7 DUF640 Protein of unknown function (DUF640) pfam13520 37 9 24.3 AA_permease_2 Amino acid permease pfam03759 36 20 55.6 PRONE PRONE (Plant-specific Rop nucleotide exchanger) pfam04782 36 20 55.6 DUF632 Protein of unknown function (DUF632) pfam02469 36 19 52.8 Fasciclin Fasciclin domain pfam05903 36 18 50.0 Peptidase_C97 PPPDE putative peptidase domain pfam00271 36 9 25.0 Helicase_C Helicase conserved C-terminal domain pfam01459 36 8 22.2 Porin_3 Eukaryotic porin pfam05910 36 6 16.7 DUF868 Plant protein of unknown function (DUF868) pfam00300 35 20 57.1 His_Phos_1 Histidine phosphatase superfamily (branch pfam05701 35 16 45.7 WEMBL Weak chloroplast movement under blue light pfam00335 35 14 40.0 Tetraspannin Tetraspanin family pfam01593 35 13 37.1 Amino_oxidase Flavin containing amine oxidoreductase pfam00244 35 12 34.3 14-3-3 14-3-3 protein pfam00860 35 12 34.3 Xan_ur_permease Permease family pfam01221 35 7 20.0 Dynein_light Dynein light chain type 1 pfam03330 35 5 14.3 DPBB_1 Rare lipoprotein A (RlpA)-like double-psi pfam02714 34 19 55.9 RSN1_7TM Calcium-dependent channel pfam03108 34 13 38.2 DBD_Tnp_Mut MuDR family transposase pfam04116 34 12 35.3 FA_hydroxylase Fatty acid hydroxylase superfamily pfam04720 34 6 17.6 PDDEXK_6 PDDEXK-like family of unknown function pfam05056 34 3 8.8 DUF674 Protein of unknown function (DUF674) pfam14389 33 23 69.7 Lzipper-MIP1 Leucine-zipper of ternary complex factor pfam04520 33 13 39.4 Senescence_reg Senescence regulator pfam03181 33 11 33.3 BURP BURP domain pfam03641 33 11 33.3 Lysine_decarbox Possible lysine decarboxylase pfam03947 33 9 27.3 Ribosomal_L2_C Ribosomal Proteins L2 pfam03208 33 4 12.1 PRA1 PRA1 family protein pfam11820 33 2 6.1 DUF3339 Protein of unknown function (DUF3339) pfam06200 32 18 56.3 tify tify domain pfam04576 32 16 50.0 Zein-binding Zein-binding pfam01398 32 15 46.9 JAB JAB1/Mov34/MPN/PAD-1 ubiquitin protease pfam03763 32 14 43.8 Remorin_C Remorin pfam04674 32 13 40.6 Phi_1 Phosphate-induced protein 1 conserved region pfam12695 32 11 34.4 Abhydrolase_5 Alpha/beta hydrolase family pfam14363 32 9 28.1 AAA_assoc Domain associated at C-terminal with AAA pfam04759 32 4 12.5 DUF617 Protein of unknown function pfam13960 32 3 9.4 DUF4218 Domain of unknown function (DUF4218) pfam16561 31 21 67.7 AMPK1_CBM Glycogen recognition site of AMP-activated pfam00676 31 19 61.3 E1_dh Dehydrogenase E1 component pfam02042 31 17 54.8 RWP-RK RWP-RK domain pfam00415 31 15 48.4 RCC1 Regulator of chromosome condensation (RCC1) pfam02373 31 13 41.9 JmjC JmjC domain pfam00635 31 12 38.7 Motile_Sperm MSP (Major sperm protein) domain pfam00350 31 11 35.5 Dynamin_N Dynamin family pfam03953 31 11 35.5 Tubulin_C Tubulin C-terminal domain pfam12146 31 10 32.3 Hydrolase_4 Serine aminopeptidase pfam03105 31 8 25.8 SPX SPX domain pfam00241 31 7 22.6 Cofilin_ADF Cofilin/tropomyosin-type actin-binding pfam05498 31 5 16.1 RALF Rapid ALkalinization Factor (RALF) pfam16913 31 5 16.1 PUNUT Purine nucleobase transmembrane transport pfam00152 30 14 46.7 tRNA-synt_2 tRNA synthetases class II (D pfam01504 30 14 46.7 PIP5K Phosphatidylinositol-4-phosphate 5-Kinase pfam05212 30 14 46.7 DUF707 Protein of unknown function (DUF707) pfam00063 30 12 40.0 Myosin_head Myosin head (motor domain) pfam01263 30 12 40.0 Aldose_epim Aldose 1-epimerase pfam05003 30 12 40.0 DUF668 Protein of unknown function (DUF668) pfam01918 30 11 36.7 Alba Alba pfam12899 30 11 36.7 Glyco_hydro_100 Alkaline and neutral invertase pfam03492 30 1 3.3 Methyltransf_7 SAM dependent carboxyl pfam05695 30 0 0.0 DUF825 Plant protein of unknown function (DUF825) pfam01704 29 31 106.9 UDPGP UTP--glucose-1-phosphate uridylyltransferase pfam02045 29 20 69.0 CBFB_NFYA CCAAT-binding transcription factor pfam16212 29 18 62.1 PhoLip_ATPase_C Phospholipid-translocating P-type ATPase pfam03109 29 16 55.2 ABC1 ABC1 family pfam01926 29 15 51.7 MMR_HSR1 50S ribosome-binding GTPase pfam03398 29 15 51.7 Ist1 Regulator of Vps4 activity in the MVB pathway pfam13923 29 15 51.7 zf-C3HC4_2 Zinc finger pfam00620 29 14 48.3 RhoGAP RhoGAP domain pfam04765 29 14 48.3 DUF616 Protein of unknown function (DUF616) pfam00224 29 13 44.8 PK Pyruvate kinase pfam05383 29 10 34.5 La La domain pfam07717 29 9 31.0 OB_NTP_bind Oligonucleotide/oligosaccharide-binding pfam00365 29 7 24.1 PFK Phosphofructokinase pfam00191 29 6 20.7 Annexin Annexin pfam16211 29 5 17.2 Histone_H2A_C C-terminus of histone H2A pfam00656 29 3 10.3 Peptidase_C14 Caspase domain pfam01070 28 28 100.0 FMN_dh FMN-dependent dehydrogenase pfam07002 28 20 71.4 Copine Copine pfam00628 28 16 57.1 PHD PHD-finger pfam00702 28 16 57.1 Hydrolase haloacid dehalogenase-like hydrolase pfam02182 28 16 57.1 SAD_SRA SAD/SRA domain pfam01425 28 15 53.6 Amidase Amidase pfam02383 28 15 53.6 Syja_N SacI homology domain pfam08372 28 14 50.0 PRT_C Plant phosphoribosyltransferase C-terminal pfam02136 28 13 46.4 NTF2 Nuclear transport factor 2 (NTF2) domain pfam02893 28 13 46.4 GRAM GRAM domain pfam03145 28 13 46.4 Sina Seven in absentia protein family pfam01167 28 11 39.3 Tub Tub family pfam00782 28 10 35.7 DSPc Dual specificity phosphatase pfam04833 28 9 32.1 COBRA COBRA-like protein pfam03124 28 8 28.6 EXS EXS family pfam00202 28 7 25.0 Aminotran_3 Aminotransferase class-III pfam00483 28 6 21.4 NTP_transferase Nucleotidyl transferase pfam00183 28 5 17.9 HSP90 Hsp90 protein pfam07816 28 4 14.3 DUF1645 Protein of unknown function (DUF1645) pfam11744 28 4 14.3 ALMT Aluminium activated malate transporter pfam00188 28 0 0.0 CAP Cysteine-rich secretory protein family pfam00855 27 18 66.7 PWWP PWWP domain pfam01373 27 18 66.7 Glyco_hydro_14 Glycosyl hydrolase family 14 pfam01145 27 16 59.3 Band_7 SPFH domain / Band 7 family pfam00107 27 15 55.6 ADH_zinc_N Zinc-binding dehydrogenase pfam00428 27 11 40.7 Ribosomal_60s 60s Acidic ribosomal protein pfam00924 27 11 40.7 MS_channel Mechanosensitive ion channel pfam09335 27 11 40.7 SNARE_assoc SNARE associated Golgi protein pfam03134 27 9 33.3 TB2_DP1_HVA22 TB2/DP1 pfam01929 27 5 18.5 Ribosomal_L14e Ribosomal protein L14 pfam03169 27 5 18.5 OPT OPT oligopeptide transporter protein pfam03088 27 3 11.1 Str_synth Strictosidine synthase pfam04669 27 3 11.1 Polysacc_synt_4 Polysaccharide biosynthesis pfam05938 27 1 3.7 Self-incomp_S1 Plant self-incompatibility protein S1 pfam04427 26 17 65.4 Brix Brix domain pfam00421 26 16 61.5 PSII Photosystem II protein pfam00406 26 13 50.0 ADK Adenylate kinase pfam16499 26 10 38.5 Melibiase_2 Alpha galactosidase A pfam00459 26 9 34.6 Inositol_P Inositol monophosphatase family pfam00689 26 9 34.6 Cation_ATPase_C Cation transporting ATPase pfam13602 26 9 34.6 ADH_zinc_N_2 Zinc-binding dehydrogenase pfam07899 26 8 30.8 Frigida Frigida-like protein pfam01105 26 7 26.9 EMP24_GP25L emp24/gp25L/p24 family/GOLD pfam04788 26 6 23.1 DUF620 Protein of unknown function (DUF620) pfam04857 26 6 23.1 CAF1 CAF1 family ribonuclease pfam07731 26 5 19.2 Cu-oxidase_2 Multicopper oxidase pfam03055 26 2 7.7 RPE65 Retinal pigment epithelial membrane protein pfam04819 26 2 7.7 DUF716 Family of unknown function (DUF716) pfam07887 25 19 76.0 Calmodulin_bind Calmodulin binding protein-like pfam08381 25 14 56.0 BRX Transcription factor regulating root and shoot growth pfam00982 25 13 52.0 Glyco_transf_20 Glycosyltransferase family 20 pfam01193 25 13 52.0 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerization pfam05739 25 13 52.0 SNARE SNARE domain pfam08323 25 13 52.0 Glyco_transf_5 Starch synthase catalytic domain pfam00916 25 12 48.0 Sulfate_transp Sulfate permease family pfam00917 25 12 48.0 MATH MATH domain pfam03619 25 12 48.0 Solute_trans_a Organic solute transporter Ostalpha pfam12357 25 12 48.0 PLD_C Phospholipase D C terminal pfam00348 25 11 44.0 polyprenyl_synt Polyprenyl synthetase pfam05623 25 11 44.0 DUF789 Protein of unknown function (DUF789) pfam05142 25 10 40.0 DUF702 Domain of unknown function (DUF702) pfam00150 25 9 36.0 Cellulase Cellulase (glycosyl hydrolase family 5) pfam00330 25 9 36.0 Aconitase Aconitase family (aconitate hydratase) pfam00804 25 9 36.0 Syntaxin Syntaxin pfam00026 25 8 32.0 Asp Eukaryotic aspartyl protease pfam00538 25 8 32.0 Linker_histone linker histone H1 and H5 family pfam00412 25 7 28.0 LIM LIM domain pfam03810 25 7 28.0 IBN_N Importin-beta N-terminal domain pfam11145 25 5 20.0 DUF2921 Protein of unknown function (DUF2921) pfam00909 25 4 16.0 Ammonium_transp Ammonium Transporter Family pfam04654 25 4 16.0 DUF599 Protein of unknown function pfam00016 25 1 4.0 RuBisCO_large Ribulose bisphosphate carboxylase large pfam01885 24 18 75.0 PTS_2-RNA RNA 2'-phosphotransferase pfam04755 24 13 54.2 PAP_fibrillin PAP_fibrillin pfam02171 24 12 50.0 Piwi Piwi domain pfam04059 24 12 50.0 RRM_2 RNA recognition motif 2 pfam01985 24 9 37.5 CRS1_YhbY CRS1 / YhbY (CRM) domain pfam10294 24 9 37.5 Methyltransf_16 Lysine methyltransferase pfam00646 24 8 33.3 F-box F-box domain pfam01063 24 8 33.3 Aminotran_4 Amino-transferase class IV pfam08491 24 8 33.3 SE Squalene epoxidase pfam13419 24 8 33.3 HAD_2 Haloacid dehalogenase-like hydrolase pfam00311 24 7 29.2 PEPcase Phosphoenolpyruvate carboxylase pfam02358 24 7 29.2 Trehalose_PPase Trehalose-phosphatase pfam02364 24 7 29.2 Glucan_synthase 1 pfam11955 24 7 29.2 PORR Plant organelle RNA recognition domain pfam00251 24 6 25.0 Glyco_hydro_32N Glycosyl hydrolases family 32 pfam00305 24 6 25.0 Lipoxygenase Lipoxygenase pfam03798 24 6 25.0 TRAM_LAG1_CLN8 TLC domain pfam04526 24 5 20.8 DUF568 Protein of unknown function (DUF568) pfam06404 24 5 20.8 PSK Phytosulfokine precursor protein (PSK) pfam07250 24 5 20.8 Glyoxal_oxid_N Glyoxal oxidase N-terminus pfam01789 24 4 16.7 PsbP PsbP pfam07939 24 4 16.7 DUF1685 Protein of unknown function (DUF1685) pfam00394 24 3 12.5 Cu-oxidase Multicopper oxidase pfam01733 24 3 12.5 Nucleoside_tran Nucleoside transporter pfam01277 24 1 4.2 Oleosin Oleosin pfam01397 24 1 4.2 Terpene_synth Terpene synthase pfam00146 24 0 0.0 NADHdh NADH dehydrogenase pfam13975 24 0 0.0 gag-asp_proteas gag-polyprotein putative aspartyl pfam04146 23 23 100.0 YTH YT521-B-like domain pfam09713 23 16 69.6 A_thal_3526 Plant protein 1589 of unknown function pfam00632 23 14 60.9 HECT HECT-domain (ubiquitin-transferase) pfam00035 23 13 56.5 dsrm Double-stranded RNA binding motif pfam10539 23 13 56.5 Dev_Cell_Death Development and cell death domain pfam07223 23 12 52.2 DUF1421 Protein of unknown function (DUF1421) pfam08613 23 12 52.2 Cyclin Cyclin pfam10607 23 12 52.2 CLTH CTLH/CRA C-terminal to LisH motif domain pfam00929 23 11 47.8 RNase_T Exonuclease pfam12165 23 11 47.8 DUF3594 Domain of unknown function (DUF3594) pfam12428 23 11 47.8 DUF3675 Protein of unknown function (DUF3675) pfam00887 23 10 43.5 ACBP Acyl CoA binding protein pfam02225 23 10 43.5 PA PA domain pfam13424 23 10 43.5 TPR_12 Tetratricopeptide repeat pfam01494 23 9 39.1 FAD_binding_3 FAD binding domain pfam04577 23 7 30.4 DUF563 Protein of unknown function (DUF563) pfam04811 23 7 30.4 Sec23_trunk Sec23/Sec24 trunk domain pfam01434 23 6 26.1 Peptidase_M41 Peptidase family M41 pfam00378 23 5 21.7 ECH_1 Enoyl-CoA hydratase/isomerase pfam04998 23 4 17.4 RNA_pol_Rpb1_5 RNA polymerase Rpb1 pfam05705 23 4 17.4 DUF829 Eukaryotic protein of unknown function (DUF829) pfam00282 23 3 13.0 Pyridoxal_deC Pyridoxal-dependent decarboxylase pfam13833 23 3 13.0 EF-hand_8 EF-hand domain pair pfam04646 23 2 8.7 DUF604 Protein of unknown function pfam03949 22 25 113.6 Malic_M Malic enzyme pfam00410 22 16 72.7 Ribosomal_S8 Ribosomal protein S8 pfam01388 22 16 72.7 ARID ARID/BRIGHT DNA binding domain pfam01094 22 15 68.2 ANF_receptor Receptor family ligand binding region pfam01150 22 15 68.2 GDA1_CD39 GDA1/CD39 (nucleoside phosphatase) family pfam06454 22 15 68.2 DUF1084 Protein of unknown function (DUF1084) pfam06364 22 14 63.6 DUF1068 Protein of unknown function (DUF1068) pfam00109 22 13 59.1 ketoacyl-synt Beta-ketoacyl synthase pfam02179 22 13 59.1 BAG BAG domain pfam01545 22 12 54.5 Cation_efflux Cation efflux family pfam04873 22 12 54.5 EIN3 Ethylene insensitive 3 pfam02800 22 11 50.0 Gp_dh_C Glyceraldehyde 3-phosphate dehydrogenase pfam13087 22 11 50.0 AAA_12 AAA domain pfam13641 22 11 50.0 Glyco_tranf_2_3 Glycosyltransferase like family 2 pfam07885 22 10 45.5 Ion_trans_2 Ion channel pfam01627 22 9 40.9 Hpt Hpt domain pfam02338 22 9 40.9 OTU OTU-like cysteine protease pfam07724 22 9 40.9 AAA_2 AAA domain (Cdc48 subfamily) pfam16656 22 9 40.9 Pur_ac_phosph_N Purple acid Phosphatase pfam14381 22 8 36.4 EDR1 Ethylene-responsive protein kinase Le-CTR1 pfam00111 22 7 31.8 Fer2 2Fe-2S iron-sulfur cluster binding domain pfam03469 22 7 31.8 XH XH domain pfam00180 22 6 27.3 Iso_dh Isocitrate/isopropylmalate dehydrogenase pfam04969 22 5 22.7 CS CS domain pfam00368 22 4 18.2 HMG-CoA_red Hydroxymethylglutaryl-coenzyme A reductase pfam00810 22 4 18.2 ER_lumen_recept ER lumen protein retaining receptor pfam02823 22 1 4.5 ATP-synt_DE_N ATP synthase pfam01426 21 15 71.4 BAH BAH domain pfam05653 21 14 66.7 Mg_trans_NIPA Magnesium transporter NIPA pfam00137 21 13 61.9 ATP-synt_C ATP synthase subunit C pfam00097 21 12 57.1 zf-C3HC4 Zinc finger pfam00928 21 12 57.1 Adap_comp_sub Adaptor complexes medium subunit family pfam03999 21 11 52.4 MAP65_ASE1 Microtubule associated protein (MAP65/ASE1 pfam11926 21 11 52.4 DUF3444 Domain of unknown function (DUF3444) pfam04690 21 9 42.9 YABBY YABBY protein pfam05691 21 9 42.9 Raffinose_syn Raffinose synthase or seed imbibition pfam11891 21 9 42.9 DUF3411 Domain of unknown function (DUF3411) pfam01237 21 8 38.1 Oxysterol_BP Oxysterol-binding protein pfam03405 21 8 38.1 FA_desaturase_2 Fatty acid desaturase pfam03407 21 8 38.1 Nucleotid_trans Nucleotide-diphospho-sugar transferase pfam01217 21 7 33.3 Clat_adaptor_s Clathrin adaptor complex small chain pfam03226 21 7 33.3 Yippee-Mis18 Yippee zinc-binding/DNA-binding /Mis18 pfam04484 21 7 33.3 DUF566 Family of unknown function (DUF566) pfam06972 21 7 33.3 DUF1296 Protein of unknown function (DUF1296) pfam00637 21 6 28.6 Clathrin Region in Clathrin and VPS pfam00899 21 6 28.6 ThiF ThiF family pfam02450 21 6 28.6 LCAT Lecithin:cholesterol acyltransferase pfam03214 21 6 28.6 RGP Reversibly glycosylated polypeptide pfam03478 21 6 28.6 DUF295 Protein of unknown function (DUF295) pfam00493 21 5 23.8 MCM MCM2/3/5 family pfam03080 21 5 23.8 DUF239 Domain of unknown function (DUF239) pfam05920 21 5 23.8 Homeobox_KN Homeobox KN domain pfam01161 21 4 19.0 PBP Phosphatidylethanolamine-binding protein pfam00445 21 3 14.3 Ribonuclease_T2 Ribonuclease T2 family pfam09265 21 3 14.3 Cytokin-bind Cytokinin dehydrogenase 1 pfam11250 21 3 14.3 FAF Fantastic Four meristem regulator pfam00933 21 2 9.5 Glyco_hydro_3 Glycosyl hydrolase family 3 N terminal pfam00389 21 1 4.8 2-Hacid_dh D-isomer specific 2-hydroxyacid pfam02212 21 1 4.8 GED Dynamin GTPase effector domain pfam04885 21 1 4.8 Stig1 Stigma-specific protein pfam13881 20 13 65.0 Rad60-SLD_2 Ubiquitin-2 like Rad60 SUMO-like pfam00006 20 12 60.0 ATP-synt_ab ATP synthase alpha/beta family pfam04258 20 12 60.0 Peptidase_A22B Signal peptide peptidase pfam07797 20 12 60.0 DUF1639 Protein of unknown function (DUF1639) pfam01544 20 11 55.0 CorA CorA-like Mg2+ transporter protein pfam00505 20 10 50.0 HMG_box HMG (high mobility group) box pfam05368 20 9 45.0 NmrA NmrA-like family pfam00262 20 8 40.0 Calreticulin Calreticulin family pfam00696 20 8 40.0 AA_kinase Amino acid kinase family pfam01138 20 8 40.0 RNase_PH 3' exoribonuclease family pfam01266 20 8 40.0 DAO FAD dependent oxidoreductase pfam01566 20 7 35.0 Nramp Natural resistance-associated macrophage protein pfam03909 20 7 35.0 BSD BSD domain pfam13365 20 7 35.0 Trypsin_2 Trypsin-like peptidase domain pfam05664 20 6 30.0 DUF810 Plant family of unknown function (DUF810) pfam13968 20 4 20.0 DUF4220 Domain of unknown function (DUF4220) pfam04859 20 3 15.0 DUF641 Plant protein of unknown function (DUF641) pfam05542 20 3 15.0 DUF760 Protein of unknown function (DUF760) pfam00124 20 0 0.0 Photo_RC Photosynthetic reaction centre protein pfam01915 20 0 0.0 Glyco_hydro_3_C Glycosyl hydrolase family 3 C-terminal pfam07468 20 0 0.0 Agglutinin Agglutinin domain pfam01754 19 17 89.5 zf-A20 A20-like zinc finger pfam08711 19 15 78.9 Med26 TFIIS helical bundle-like domain pfam00658 19 14 73.7 PABP Poly-adenylate binding protein pfam16719 19 14 73.7 SAWADEE SAWADEE domain pfam00790 19 12 63.2 VHS VHS domain pfam01253 19 12 63.2 SUI1 Translation initiation factor SUI1 pfam07800 19 12 63.2 DUF1644 Protein of unknown function (DUF1644) pfam09606 19 12 63.2 Med15 ARC105 or Med15 subunit of Mediator complex pfam02902 19 11 57.9 Peptidase_C48 Ulp1 protease family pfam01595 19 9 47.4 DUF21 Domain of unknown function DUF21 pfam10446 19 8 42.1 DUF2457 Protein of unknown function (DUF2457) pfam00120 19 7 36.8 Gln-synt_C Glutamine synthetase pfam01564 19 7 36.8 Spermine_synth Spermine/spermidine synthase pfam01925 19 6 31.6 TauE Sulfite exporter TauE/SafE pfam02598 19 6 31.6 Methyltrn_RNA_3 Putative RNA methyltransferase pfam03009 19 6 31.6 GDPD Glycerophosphoryl diester phosphodiesterase pfam00198 19 5 26.3 2-oxoacid_dh 2-oxoacid dehydrogenases acyltransferase pfam01369 19 5 26.3 Sec7 Sec7 domain pfam01479 19 5 26.3 S4 S4 domain pfam11976 19 4 21.1 Rad60-SLD Ubiquitin-2 like Rad60 SUMO-like pfam14008 19 4 21.1 Metallophos_C Iron/zinc purple acid phosphatase-like pfam04145 19 3 15.8 Ctr Ctr copper transporter family pfam00312 19 0 0.0 Ribosomal_S15 Ribosomal protein S15 pfam13650 19 0 0.0 Asp_protease_2 Aspartyl protease pfam05911 18 19 105.6 FPP Filament-like plant protein pfam05057 18 14 77.8 DUF676 Putative serine esterase (DUF676) pfam00571 18 13 72.2 CBS CBS domain pfam04818 18 12 66.7 CTD_bind RNA polymerase II-binding domain pfam00485 18 11 61.1 PRK Phosphoribulokinase / Uridine kinase family pfam07011 18 11 61.1 DUF1313 Protein of unknown function (DUF1313) pfam00536 18 9 50.0 SAM_1 SAM domain (Sterile alpha motif) pfam00850 18 9 50.0 Hist_deacetyl Histone deacetylase domain pfam00886 18 9 50.0 Ribosomal_S16 Ribosomal protein S16 pfam05770 18 9 50.0 Ins134_P3_kin Inositol 1 pfam08648 18 9 50.0 DUF1777 Protein of unknown function (DUF1777) pfam12481 18 9 50.0 DUF3700 Aluminium induced protein pfam08449 18 8 44.4 UAA UAA transporter family pfam11886 18 8 44.4 TOC159_MAD Translocase of chloroplast 159/132 pfam12128 18 8 44.4 DUF3584 Protein of unknown function (DUF3584) pfam00266 18 7 38.9 Aminotran_5 Aminotransferase class-V pfam00719 18 7 38.9 Pyrophosphatase Inorganic pyrophosphatase pfam01027 18 6 33.3 Bax1-I Inhibitor of apoptosis-promoting Bax1 pfam02991 18 6 33.3 Atg8 Autophagy protein Atg8 ubiquitin like pfam05879 18 6 33.3 RHD3 Root hair defective 3 GTP-binding protein (RHD3) pfam08387 18 6 33.3 FBD FBD pfam00636 18 5 27.8 Ribonuclease_3 Ribonuclease III domain pfam00955 18 5 27.8 HCO3_cotransp HCO3- transporter family pfam14291 18 5 27.8 DUF4371 Domain of unknown function (DUF4371) pfam00411 18 4 22.2 Ribosomal_S11 Ribosomal protein S11 pfam01756 18 4 22.2 ACOX Acyl-CoA oxidase pfam12710 18 4 22.2 HAD haloacid dehalogenase-like hydrolase pfam00307 18 3 16.7 CH Calponin homology (CH) domain pfam01103 18 3 16.7 Bac_surface_Ag Surface antigen pfam01466 18 3 16.7 Skp1 Skp1 family pfam06219 18 3 16.7 DUF1005 Protein of unknown function (DUF1005) pfam01151 18 2 11.1 ELO GNS1/SUR4 family pfam00390 18 1 5.6 malic Malic enzyme pfam03859 17 14 82.4 CG-1 CG-1 domain pfam05873 17 13 76.5 Mt_ATP-synt_D ATP synthase D chain pfam00557 17 10 58.8 Peptidase_M24 Metallopeptidase family M24 pfam01073 17 10 58.8 3Beta_HSD 3-beta hydroxysteroid dehydrogenase/isomerase pfam03062 17 9 52.9 MBOAT MBOAT pfam05042 17 9 52.9 Caleosin Caleosin related protein pfam14571 17 9 52.9 Di19_C Stress-induced protein Di19 pfam03283 17 8 47.1 PAE Pectinacetylesterase pfam01612 17 7 41.2 DNA_pol_A_exo1 3'-5' exonuclease pfam03030 17 7 41.2 H_PPase Inorganic H+ pyrophosphatase pfam00654 17 6 35.3 Voltage_CLC Voltage gated chloride channel pfam02234 17 6 35.3 CDI Cyclin-dependent kinase inhibitor pfam03188 17 5 29.4 Cytochrom_B561 Eukaryotic cytochrome b561 pfam03595 17 5 29.4 SLAC1 Voltage-dependent anion channel pfam04099 17 5 29.4 Sybindin Sybindin-like family pfam05055 17 5 29.4 DUF677 Protein of unknown function (DUF677) pfam00117 17 4 23.5 GATase Glutamine amidotransferase class-I pfam00675 17 4 23.5 Peptidase_M16 Insulinase (Peptidase family M16) pfam04862 17 4 23.5 DUF642 Protein of unknown function (DUF642) pfam11904 17 4 23.5 GPCR_chapero_1 GPCR-chaperone pfam12678 17 4 23.5 zf-rbx1 RING-H2 zinc finger pfam12850 17 4 23.5 Metallophos_2 Calcineurin-like phosphoesterase pfam00195 17 3 17.6 Chal_sti_synt_N Chalcone and stilbene synthases pfam00175 17 2 11.8 NAD_binding_1 Oxidoreductase NAD-binding domain pfam00795 17 2 11.8 CN_hydrolase Carbon-nitrogen hydrolase pfam04970 17 2 11.8 LRAT Lecithin retinol acyltransferase pfam12023 17 2 11.8 DUF3511 Domain of unknown function (DUF3511) pfam00550 17 1 5.9 PP-binding Phosphopantetheine attachment site pfam12609 17 1 5.9 DUF3774 Wound-induced protein pfam05078 17 0 0.0 DUF679 Protein of unknown function (DUF679) pfam07911 17 0 0.0 DUF1677 Protein of unknown function (DUF1677) pfam13532 17 0 0.0 2OG-FeII_Oxy_2 2OG-Fe(II) oxygenase superfamily pfam14576 17 0 0.0 SEO_N Sieve element occlusion N-terminus pfam12847 16 14 87.5 Methyltransf_18 Methyltransferase domain pfam09180 16 13 81.3 ProRS-C_1 Prolyl-tRNA synthetase pfam01596 16 10 62.5 Methyltransf_3 O-methyltransferase pfam05577 16 9 56.3 Peptidase_S28 Serine carboxypeptidase S28 pfam05631 16 9 56.3 MFS_5 Sugar-tranasporters pfam14681 16 9 56.3 UPRTase Uracil phosphoribosyltransferase pfam01156 16 8 50.0 IU_nuc_hydro Inosine-uridine preferring nucleoside pfam17035 16 8 50.0 BET Bromodomain extra-terminal - transcription pfam00297 16 7 43.8 Ribosomal_L3 Ribosomal protein L3 pfam01058 16 7 43.8 Oxidored_q6 NADH ubiquinone oxidoreductase pfam01467 16 7 43.8 CTP_transf_like Cytidylyltransferase-like pfam03358 16 7 43.8 FMN_red NADPH-dependent FMN reductase pfam03638 16 7 43.8 TCR Tesmin/TSO1-like CXC domain pfam00313 16 6 37.5 CSD 'Cold-shock' DNA-binding domain pfam00388 16 6 37.5 PI-PLC-X Phosphatidylinositol-specific phospholipase C pfam01112 16 6 37.5 Asparaginase_2 Asparaginase pfam05687 16 6 37.5 BES1_N BES1/BZR1 plant transcription factor pfam07174 16 6 37.5 FAP Fibronectin-attachment protein (FAP) pfam07534 16 6 37.5 TLD TLD pfam08670 16 6 37.5 MEKHLA MEKHLA domain pfam15449 16 6 37.5 Retinal Retinal protein pfam00235 16 5 31.3 Profilin Profilin pfam00487 16 5 31.3 FA_desaturase Fatty acid desaturase pfam00488 16 5 31.3 MutS_V MutS domain V pfam01585 16 5 31.3 G-patch G-patch domain pfam00638 16 4 25.0 Ran_BP1 RanBP1 domain pfam00579 16 3 18.8 tRNA-synt_1b tRNA synthetases class I (W and Y) pfam03468 16 3 18.8 XS XS domain pfam04144 16 3 18.8 SCAMP SCAMP family pfam05703 16 2 12.5 Auxin_canalis Auxin canalization pfam00828 16 1 6.3 Ribosomal_L18e Ribosomal protein L18e/L15 pfam01988 16 1 6.3 VIT1 VIT family pfam13961 16 0 0.0 DUF4219 Domain of unknown function (DUF4219) pfam13259 15 17 113.3 DUF4050 Protein of unknown function (DUF4050) pfam00164 15 12 80.0 Ribosom_S12_S23 Ribosomal protein S12/S23 pfam01179 15 12 80.0 Cu_amine_oxid Copper amine oxidase pfam11931 15 12 80.0 DUF3449 Domain of unknown function (DUF3449) pfam12579 15 12 80.0 DUF3755 Protein of unknown function (DUF3755) pfam03162 15 10 66.7 Y_phosphatase2 Tyrosine phosphatase family pfam04130 15 9 60.0 Spc97_Spc98 Spc97 / Spc98 family pfam01214 15 8 53.3 CK_II_beta Casein kinase II regulatory subunit pfam13415 15 8 53.3 Kelch_3 Galactose oxidase pfam02517 15 7 46.7 Abi CAAX protease self-immunity pfam04084 15 7 46.7 ORC2 Origin recognition complex subunit 2 pfam04142 15 7 46.7 Nuc_sug_transp Nucleotide-sugar transporter pfam04178 15 7 46.7 Got1 Got1/Sft2-like family pfam00484 15 6 40.0 Pro_CA Carbonic anhydrase pfam00581 15 6 40.0 Rhodanese Rhodanese-like domain pfam01753 15 6 40.0 zf-MYND MYND finger pfam03061 15 6 40.0 4HBT Thioesterase superfamily pfam03092 15 6 40.0 BT1 BT1 family pfam16994 15 6 40.0 Glyco_trans_4_5 Glycosyl-transferase family 4 pfam01849 15 5 33.3 NAC NAC domain pfam02776 15 5 33.3 TPP_enzyme_N Thiamine pyrophosphate enzyme pfam03767 15 5 33.3 Acid_phosphat_B HAD superfamily pfam05627 15 5 33.3 AvrRpt-cleavage Cleavage site for pathogenic type III pfam05637 15 5 33.3 Glyco_transf_34 galactosyl transferase GMA12/MNN10 pfam04083 15 4 26.7 Abhydro_lipase Partial alpha/beta-hydrolase lipase pfam00060 15 3 20.0 Lig_chan Ligand-gated ion channel pfam00572 15 3 20.0 Ribosomal_L13 Ribosomal protein L13 pfam01569 15 3 20.0 PAP2 PAP2 superfamily pfam02544 15 3 20.0 Steroid_dh 3-oxo-5-alpha-steroid 4-dehydrogenase pfam06974 15 3 20.0 DUF1298 Protein of unknown function (DUF1298) pfam00194 15 2 13.3 Carb_anhydrase Eukaryotic-type carbonic anhydrase pfam01055 15 2 13.3 Glyco_hydro_31 Glycosyl hydrolases family 31 pfam02518 15 2 13.3 HATPase_c Histidine kinase- pfam08030 15 2 13.3 NAD_binding_6 Ferric reductase NAD binding domain pfam00565 15 1 6.7 SNase Staphylococcal nuclease homologue pfam04678 15 1 6.7 MCU Mitochondrial calcium uniporter pfam06697 15 1 6.7 DUF1191 Protein of unknown function (DUF1191) pfam00181 15 0 0.0 Ribosomal_L2 Ribosomal Proteins L2 pfam00413 15 0 0.0 Peptidase_M10 Matrixin pfam01824 15 0 0.0 MatK_N MatK/TrnK amino terminal region pfam04499 14 16 114.3 SAPS SIT4 phosphatase-associated protein pfam01195 14 12 85.7 Pept_tRNA_hydro Peptidyl-tRNA hydrolase pfam04727 14 12 85.7 ELMO_CED12 ELMO/CED-12 family pfam09741 14 11 78.6 DUF2045 Uncharacterized conserved protein (DUF2045) pfam16016 14 10 71.4 DUF4782 Domain of unknown function (DUF4782) pfam00255 14 9 64.3 GSHPx Glutathione peroxidase pfam00789 14 9 64.3 UBX UBX domain pfam03352 14 9 64.3 Adenine_glyco Methyladenine glycosylase pfam00609 14 8 57.1 DAGK_acc Diacylglycerol kinase accessory domain pfam02779 14 8 57.1 Transket_pyr Transketolase pfam16544 14 8 57.1 STAR_dimer Homodimerization region of STAR domain pfam02138 14 7 50.0 Beach Beige/BEACH domain pfam02190 14 7 50.0 LON_substr_bdg ATP-dependent protease La (LON) pfam07821 14 7 50.0 Alpha-amyl_C2 Alpha-amylase C-terminal beta-sheet pfam00331 14 6 42.9 Glyco_hydro_10 Glycosyl hydrolase family 10 pfam01749 14 6 42.9 IBB Importin beta binding domain pfam01907 14 6 42.9 Ribosomal_L37e Ribosomal protein L37e pfam03126 14 6 42.9 Plus-3 Plus-3 domain pfam05199 14 6 42.9 GMC_oxred_C GMC oxidoreductase pfam08700 14 6 42.9 Vps51 Vps51/Vps67 pfam09177 14 6 42.9 Syntaxin-6_N Syntaxin 6 pfam00667 14 5 35.7 FAD_binding_1 FAD binding domain pfam01255 14 5 35.7 Prenyltransf Putative undecaprenyl diphosphate pfam04117 14 5 35.7 Mpv17_PMP22 Mpv17 / PMP22 family pfam07990 14 5 35.7 NABP Nucleic acid binding protein NABP pfam04515 14 4 28.6 Choline_transpo Plasma-membrane choline transporter pfam04548 14 4 28.6 AIG1 AIG1 family pfam01092 14 3 21.4 Ribosomal_S6e Ribosomal protein S6e pfam01536 14 3 21.4 SAM_decarbox Adenosylmethionine decarboxylase pfam02115 14 3 21.4 Rho_GDI RHO protein GDP dissociation inhibitor pfam02847 14 3 21.4 MA3 MA3 domain pfam03982 14 3 21.4 DAGAT Diacylglycerol acyltransferase pfam06955 14 3 21.4 XET_C Xyloglucan endo-transglycosylase (XET) pfam08718 14 3 21.4 GLTP Glycolipid transfer protein (GLTP) pfam14159 14 3 21.4 CAAD CAAD domains of cyanobacterial aminoacyl-tRNA pfam00687 14 2 14.3 Ribosomal_L1 Ribosomal protein L1p/L10e family pfam00862 14 2 14.3 Sucrose_synth Sucrose synthase pfam05686 14 2 14.3 Glyco_transf_90 Glycosyl transferase family 90 pfam13347 14 2 14.3 MFS_2 MFS/sugar transport protein pfam01201 14 1 7.1 Ribosomal_S8e Ribosomal protein S8e pfam01679 14 1 7.1 Pmp3 Proteolipid membrane potential modulator pfam01775 14 1 7.1 Ribosomal_L18ae Ribosomal L18ae/LX protein domain pfam03727 14 1 7.1 Hexokinase_2 Hexokinase pfam07279 14 1 7.1 DUF1442 Protein of unknown function (DUF1442) pfam13813 14 1 7.1 MBOAT_2 Membrane bound O-acyl transferase family pfam00027 14 0 0.0 cNMP_binding Cyclic nucleotide-binding domain pfam03754 14 0 0.0 DUF313 Domain of unknown function (DUF313) pfam16845 14 0 0.0 SQAPI Aspartic acid proteinase inhibitor pfam02773 13 19 146.2 S-AdoMet_synt_C S-adenosylmethionine synthetase pfam03901 13 12 92.3 Glyco_transf_22 Alg9-like mannosyltransferase family pfam06136 13 12 92.3 DUF966 Domain of unknown function (DUF966) pfam00274 13 11 84.6 Glycolytic Fructose-bisphosphate aldolase class-I pfam04051 13 11 84.6 TRAPP Transport protein particle (TRAPP) component pfam13450 13 10 76.9 NAD_binding_8 NAD(P)-binding Rossmann-like domain pfam00257 13 9 69.2 Dehydrin Dehydrin pfam02866 13 9 69.2 Ldh_1_C lactate/malate dehydrogenase pfam07496 13 9 69.2 zf-CW CW-type Zinc Finger pfam12043 13 9 69.2 DUF3527 Domain of unknown function (DUF3527) pfam01803 13 8 61.5 LIM_bind LIM-domain binding protein pfam04504 13 8 61.5 DUF573 Protein of unknown function pfam06325 13 8 61.5 PrmA Ribosomal protein L11 methyltransferase (PrmA) pfam00849 13 7 53.8 PseudoU_synth_2 RNA pseudouridylate synthase pfam01532 13 7 53.8 Glyco_hydro_47 Glycosyl hydrolase family 47 pfam04842 13 7 53.8 DUF639 Plant protein of unknown function (DUF639) pfam00762 13 6 46.2 Ferrochelatase Ferrochelatase pfam01074 13 6 46.2 Glyco_hydro_38 Glycosyl hydrolases family 38 N-terminal pfam03360 13 6 46.2 Glyco_transf_43 Glycosyltransferase family 43 pfam05755 13 6 46.2 REF Rubber elongation factor protein (REF) pfam06241 13 6 46.2 Castor_Poll_mid Castor and Pollux pfam08590 13 6 46.2 DUF1771 Domain of unknown function (DUF1771) pfam08704 13 6 46.2 GCD14 tRNA methyltransferase complex GCD14 subunit pfam13243 13 6 46.2 SQHop_cyclase_C Squalene-hopene cyclase C-terminal pfam00237 13 5 38.5 Ribosomal_L22 Ribosomal protein L22p/L17e pfam00733 13 5 38.5 Asn_synthase Asparagine synthase pfam01417 13 5 38.5 ENTH ENTH domain pfam01650 13 5 38.5 Peptidase_C13 Peptidase C13 family pfam03791 13 5 38.5 KNOX2 KNOX2 domain pfam06026 13 5 38.5 Rib_5-P_isom_A Ribose 5-phosphate isomerase A pfam06045 13 5 38.5 Rhamnogal_lyase Rhamnogalacturonate lyase family pfam07891 13 5 38.5 DUF1666 Protein of unknown function (DUF1666) pfam00221 13 4 30.8 Lyase_aromatic Aromatic amino acid lyase pfam00781 13 4 30.8 DAGK_cat Diacylglycerol kinase catalytic domain pfam01633 13 4 30.8 Choline_kinase Choline/ethanolamine kinase pfam05694 13 4 30.8 SBP56 56kDa selenium binding protein (SBP56) pfam13360 13 4 30.8 PQQ_2 PQQ-like domain pfam13646 13 4 30.8 HEAT_2 HEAT repeats pfam14416 13 4 30.8 PMR5N PMR5 N terminal Domain pfam04055 13 3 23.1 Radical_SAM Radical SAM superfamily pfam06273 13 3 23.1 eIF-4B Plant specific eukaryotic initiation factor 4B pfam11523 13 3 23.1 DUF3223 Protein of unknown function (DUF3223) pfam00253 13 2 15.4 Ribosomal_S14 Ribosomal protein S14p/S29e pfam00288 13 2 15.4 GHMP_kinases_N GHMP kinases N terminal domain pfam00338 13 2 15.4 Ribosomal_S10 Ribosomal protein S10p/S20e pfam00494 13 2 15.4 SQS_PSY Squalene/phytoene synthase pfam00724 13 2 15.4 Oxidored_FMN NADH:flavin oxidoreductase / NADH oxidase pfam03311 13 2 15.4 Cornichon Cornichon protein pfam04618 13 2 15.4 HD-ZIP_N HD-ZIP protein N terminus pfam06101 13 2 15.4 DUF946 Plant protein of unknown function (DUF946) pfam06376 13 2 15.4 DUF1070 Protein of unknown function (DUF1070) pfam13656 13 1 7.7 RNA_pol_L_2 RNA polymerase Rpb3/Rpb11 dimerization pfam14392 13 1 7.7 zf-CCHC_4 Zinc knuckle pfam00032 13 0 0.0 Cytochrom_B_C Cytochrome b(C-terminal)/b6/petD pfam00197 13 0 0.0 Kunitz_legume Trypsin and protease inhibitor pfam01578 13 0 0.0 Cytochrom_C_asm Cytochrome C assembly protein pfam01737 13 0 0.0 Ycf9 YCF9 pfam02532 13 0 0.0 PsbI Photosystem II reaction centre I protein (PSII pfam07795 13 0 0.0 DUF1635 Protein of unknown function (DUF1635) pfam13599 13 0 0.0 Pentapeptide_4 Pentapeptide repeats (9 copies) pfam14476 13 0 0.0 Chloroplast_duf Petal formation-expressed pfam02854 12 15 125.0 MIF4G MIF4G domain pfam05904 12 13 108.3 DUF863 Plant protein of unknown function (DUF863) pfam06217 12 11 91.7 GAGA_bind GAGA binding protein-like family pfam01257 12 10 83.3 2Fe-2S_thioredx Thioredoxin-like [2Fe-2S] ferredoxin pfam00252 12 9 75.0 Ribosomal_L16 Ribosomal protein L16p/L10e pfam00588 12 9 75.0 SpoU_methylase SpoU rRNA Methylase family pfam01485 12 9 75.0 IBR IBR domain pfam02791 12 9 75.0 DDT DDT domain pfam01429 12 8 66.7 MBD Methyl-CpG binding domain pfam05030 12 8 66.7 SSXT SSXT protein (N-terminal region) pfam07227 12 8 66.7 PHD_Oberon PHD - plant homeodomain finger protein pfam08235 12 8 66.7 LNS2 LNS2 (Lipin/Ned1/Smp2) pfam12076 12 8 66.7 Wax2_C WAX2 C-terminal domain pfam16639 12 8 66.7 Apocytochr_F_N Apocytochrome F pfam00080 12 7 58.3 Sod_Cu Copper/zinc superoxide dismutase (SODC) pfam00145 12 7 58.3 DNA_methylase C-5 cytosine-specific DNA methylase pfam03006 12 7 58.3 HlyIII Haemolysin-III related pfam03153 12 7 58.3 TFIIA Transcription factor IIA pfam08541 12 7 58.3 ACP_syn_III_C 3-Oxoacyl-[acyl-carrier-protein (ACP)] pfam13589 12 7 58.3 HATPase_c_3 Histidine kinase- pfam13832 12 7 58.3 zf-HC5HC2H_2 PHD-zinc-finger like domain pfam13893 12 7 58.3 RRM_5 RNA recognition motif pfam00364 12 6 50.0 Biotin_lipoyl Biotin-requiring enzyme pfam01643 12 6 50.0 Acyl-ACP_TE Acyl-ACP thioesterase pfam08423 12 6 50.0 Rad51 Rad51 pfam10428 12 6 50.0 SOG2 RAM signalling pathway protein pfam00316 12 5 41.7 FBPase Fructose-1-6-bisphosphatase pfam01008 12 5 41.7 IF-2B Initiation factor 2 subunit family pfam01433 12 5 41.7 Peptidase_M1 Peptidase family M1 pfam03556 12 5 41.7 Cullin_binding Cullin binding pfam04832 12 5 41.7 SOUL SOUL heme-binding protein pfam06068 12 5 41.7 TIP49 TIP49 C-terminus pfam11331 12 5 41.7 zinc_ribbon_12 Probable zinc-ribbon domain pfam12767 12 5 41.7 SAGA-Tad1 Transcriptional regulator of RNA polII pfam13868 12 5 41.7 TPH Trichohyalin-plectin-homology domain pfam14570 12 5 41.7 zf-RING_4 RING/Ubox like zinc-binding domain pfam00156 12 4 33.3 Pribosyltran Phosphoribosyl transferase domain pfam00318 12 4 33.3 Ribosomal_S2 Ribosomal protein S2 pfam00995 12 4 33.3 Sec1 Sec1 family pfam01287 12 4 33.3 eIF-5a Eukaryotic elongation factor 5A hypusine pfam03248 12 4 33.3 Rer1 Rer1 family pfam04884 12 4 33.3 DUF647 Vitamin B6 photo-protection and homoeostasis pfam06075 12 4 33.3 DUF936 Plant protein of unknown function (DUF936) pfam13844 12 4 33.3 Glyco_transf_41 Glycosyl transferase family 41 pfam16884 12 4 33.3 ADH_N_2 N-terminal domain of oxidoreductase pfam00121 12 3 25.0 TIM Triosephosphate isomerase pfam00575 12 3 25.0 S1 S1 RNA binding domain pfam02784 12 3 25.0 Orn_Arg_deC_N Pyridoxal-dependent decarboxylase pfam03364 12 3 25.0 Polyketide_cyc Polyketide cyclase / dehydrase and lipid pfam12056 12 3 25.0 DUF3537 Protein of unknown function (DUF3537) pfam14360 12 3 25.0 PAP2_C PAP2 superfamily C-terminal pfam00056 12 2 16.7 Ldh_1_N lactate/malate dehydrogenase pfam00238 12 2 16.7 Ribosomal_L14 Ribosomal protein L14p/L23e pfam01363 12 2 16.7 FYVE FYVE zinc finger pfam01965 12 2 16.7 DJ-1_PfpI DJ-1/PfpI family pfam02214 12 2 16.7 BTB_2 BTB/POZ domain pfam03650 12 2 16.7 MPC uncharacterized protein family (UPF0041) pfam04864 12 2 16.7 Alliinase_C Allinase pfam07058 12 2 16.7 MAP70 Microtubule-associated protein 70 pfam13621 12 2 16.7 Cupin_8 Cupin-like domain pfam01040 12 1 8.3 UbiA UbiA prenyltransferase family pfam01781 12 1 8.3 Ribosomal_L38e Ribosomal L38e protein family pfam04927 12 1 8.3 SMP Seed maturation protein pfam00306 12 0 0.0 ATP-synt_ab_C ATP synthase alpha/beta chain pfam00329 12 0 0.0 Complex1_30kDa Respiratory-chain NADH dehydrogenase pfam02533 12 0 0.0 PsbK Photosystem II 4 kDa reaction centre component pfam02788 12 0 0.0 RuBisCO_large_N Ribulose bisphosphate carboxylase pfam04724 12 0 0.0 Glyco_transf_17 Glycosyltransferase family 17 pfam05340 12 0 0.0 DUF740 Protein of unknown function (DUF740) pfam05617 12 0 0.0 Prolamin_like Prolamin-like pfam08031 12 0 0.0 BBE Berberine and berberine like pfam00503 11 12 109.1 G-alpha G-protein alpha subunit pfam00800 11 11 100.0 PDT Prephenate dehydratase pfam00162 11 9 81.8 PGK Phosphoglycerate kinase pfam00861 11 9 81.8 Ribosomal_L18p Ribosomal L18p/L5e family pfam03097 11 9 81.8 BRO1 BRO1-like domain pfam03643 11 9 81.8 Vps26 Vacuolar protein sorting-associated protein 26 pfam00956 11 8 72.7 NAP Nucleosome assembly protein (NAP) pfam02163 11 8 72.7 Peptidase_M50 Peptidase family M50 pfam04802 11 8 72.7 SMK-1 Component of IIS longevity pathway SMK-1 pfam07716 11 8 72.7 bZIP_2 Basic region leucine zipper pfam00133 11 7 63.6 tRNA-synt_1 tRNA synthetases class I (I pfam00498 11 7 63.6 FHA FHA domain pfam05011 11 7 63.6 DBR1 Lariat debranching enzyme pfam07970 11 7 63.6 COPIIcoated_ERV Endoplasmic reticulum vesicle pfam16113 11 7 63.6 ECH_2 Enoyl-CoA hydratase/isomerase pfam00231 11 6 54.5 ATP-synt ATP synthase pfam00542 11 6 54.5 Ribosomal_L12 Ribosomal protein L7/L12 C-terminal pfam01778 11 6 54.5 Ribosomal_L28e Ribosomal L28e protein family pfam01842 11 6 54.5 ACT ACT domain pfam03159 11 6 54.5 XRN_N XRN 5'-3' exonuclease N-terminus pfam03924 11 6 54.5 CHASE CHASE domain pfam04367 11 6 54.5 DUF502 Protein of unknown function (DUF502) pfam07847 11 6 54.5 DUF1637 Protein of unknown function (DUF1637) pfam07876 11 6 54.5 Dabb Stress responsive A/B Barrel Domain pfam13344 11 6 54.5 Hydrolase_6 Haloacid dehalogenase-like hydrolase pfam14523 11 6 54.5 Syntaxin_2 Syntaxin-like protein pfam00573 11 5 45.5 Ribosomal_L4 Ribosomal protein L4/L1 family pfam01189 11 5 45.5 Nol1_Nop2_Fmu 16S rRNA methyltransferase RsmF pfam01697 11 5 45.5 Glyco_transf_92 Glycosyltransferase family 92 pfam03647 11 5 45.5 Tmemb_14 Transmembrane proteins 14C pfam05047 11 5 45.5 L51_S25_CI-B8 Mitochondrial ribosomal protein L51 / pfam08553 11 5 45.5 VID27 VID27 cytoplasmic protein pfam13292 11 5 45.5 DXP_synthase_N 1-deoxy-D-xylulose-5-phosphate synthase pfam00939 11 4 36.4 Na_sulph_symp Sodium:sulfate symporter transmembrane pfam01281 11 4 36.4 Ribosomal_L9_N Ribosomal protein L9 pfam01348 11 4 36.4 Intron_maturas2 Type II intron maturase pfam01979 11 4 36.4 Amidohydro_1 Amidohydrolase family pfam03721 11 4 36.4 UDPG_MGDP_dh_N UDP-glucose/GDP-mannose dehydrogenase pfam05221 11 4 36.4 AdoHcyase S-adenosyl-L-homocysteine hydrolase pfam07986 11 4 36.4 TBCC Tubulin binding cofactor C pfam12265 11 4 36.4 CAF1C_H4-bd Histone-binding protein RBBP4 or subunit pfam00673 11 3 27.3 Ribosomal_L5_C ribosomal L5P family C-terminus pfam00730 11 3 27.3 HhH-GPD HhH-GPD superfamily base excision DNA repair pfam01025 11 3 27.3 GrpE GrpE pfam01416 11 3 27.3 PseudoU_synth_1 tRNA pseudouridine synthase pfam01758 11 3 27.3 SBF Sodium Bile acid symporter family pfam02330 11 3 27.3 MAM33 Mitochondrial glycoprotein pfam06957 11 3 27.3 COPI_C Coatomer (COPI) alpha subunit C-terminus pfam00203 11 2 18.2 Ribosomal_S19 Ribosomal protein S19 pfam00304 11 2 18.2 Gamma-thionin Gamma-thionin family pfam00347 11 2 18.2 Ribosomal_L6 Ribosomal protein L6 pfam02230 11 2 18.2 Abhydrolase_2 Phospholipase/Carboxylesterase pfam06552 11 2 18.2 TOM20_plant Plant specific mitochondrial import pfam13398 11 2 18.2 Peptidase_M50B Peptidase M50B-like pfam00935 11 1 9.1 Ribosomal_L44 Ribosomal protein L44 pfam02374 11 1 9.1 ArsA_ATPase Anion-transporting ATPase pfam04078 11 1 9.1 Rcd1 Cell differentiation family pfam04997 11 1 9.1 RNA_pol_Rpb1_1 RNA polymerase Rpb1 pfam12143 11 1 9.1 PPO1_KFDV Protein of unknown function (DUF_B2219) pfam16203 11 1 9.1 ERCC3_RAD25_C ERCC3/RAD25/XPB C-terminal helicase pfam04431 11 0 0.0 Pec_lyase_N Pectate lyase pfam05512 11 0 0.0 AWPM-19 AWPM-19-like family pfam01805 10 13 130.0 Surp Surp module pfam04928 10 12 120.0 PAP_central Poly(A) polymerase central domain pfam05564 10 12 120.0 Auxin_repressed Dormancy/auxin associated protein pfam01066 10 10 100.0 CDP-OH_P_transf CDP-alcohol phosphatidyltransferase pfam10373 10 10 100.0 EST1_DNA_bind Est1 DNA/RNA binding domain pfam00883 10 9 90.0 Peptidase_M17 Cytosol aminopeptidase family pfam09440 10 9 90.0 eIF3_N eIF3 subunit 6 N terminal domain pfam00344 10 8 80.0 SecY SecY translocase pfam02096 10 7 70.0 60KD_IMP 60Kd inner membrane protein pfam02781 10 7 70.0 G6PD_C Glucose-6-phosphate dehydrogenase pfam04825 10 7 70.0 Rad21_Rec8_N N terminus of Rad21 / Rec8 like protein pfam14308 10 7 70.0 DnaJ-X X-domain of DnaJ-containing pfam02209 10 6 60.0 VHP Villin headpiece domain pfam05634 10 6 60.0 APO_RNA-bind APO RNA-binding pfam07777 10 6 60.0 MFMR G-box binding protein MFMR pfam08389 10 6 60.0 Xpo1 Exportin 1-like protein pfam09405 10 6 60.0 Btz CASC3/Barentsz eIF4AIII binding pfam10497 10 6 60.0 zf-4CXXC_R1 Zinc-finger domain of monoamine-oxidase A pfam12490 10 6 60.0 BCAS3 Breast carcinoma amplified sequence 3 pfam13925 10 6 60.0 Katanin_con80 con80 domain of Katanin pfam00383 10 5 50.0 dCMP_cyt_deam_1 Cytidine and deoxycytidylate deaminase pfam01667 10 5 50.0 Ribosomal_S27e Ribosomal protein S27 pfam01680 10 5 50.0 SOR_SNZ SOR/SNZ family pfam02672 10 5 50.0 CP12 CP12 domain pfam03386 10 5 50.0 ENOD93 Early nodulin 93 ENOD93 protein pfam04667 10 5 50.0 Endosulfine cAMP-regulated phosphoprotein/endosulfine pfam05761 10 5 50.0 5_nucleotid 5' nucleotidase family pfam07744 10 5 50.0 SPOC SPOC domain pfam00416 10 4 40.0 Ribosomal_S13 Ribosomal protein S13/S18 pfam00732 10 4 40.0 GMC_oxred_N GMC oxidoreductase pfam00867 10 4 40.0 XPG_I XPG I-region pfam01182 10 4 40.0 Glucosamine_iso Glucosamine-6-phosphate pfam01738 10 4 40.0 DLH Dienelactone hydrolase family pfam01798 10 4 40.0 Nop snoRNA binding domain pfam01975 10 4 40.0 SurE Survival protein SurE pfam02777 10 4 40.0 Sod_Fe_C Iron/manganese superoxide dismutases pfam04054 10 4 40.0 Not1 CCR4-Not complex component pfam04739 10 4 40.0 AMPKBI 5'-AMP-activated protein kinase beta subunit pfam09273 10 4 40.0 Rubis-subs-bind Rubisco LSMT substrate-binding pfam00189 10 3 30.0 Ribosomal_S3_C Ribosomal protein S3 pfam00360 10 3 30.0 PHY Phytochrome region pfam01476 10 3 30.0 LysM LysM domain pfam03291 10 3 30.0 Pox_MCEL mRNA capping enzyme pfam03297 10 3 30.0 Ribosomal_S25 S25 ribosomal protein pfam04511 10 3 30.0 DER1 Der1-like family pfam08569 10 3 30.0 Mo25 Mo25-like pfam13091 10 3 30.0 PLDc_2 PLD-like domain pfam00113 10 2 20.0 Enolase_C Enolase pfam00587 10 2 20.0 tRNA-synt_2b tRNA synthetase class II core domain (G pfam01053 10 2 20.0 Cys_Met_Meta_PP Cys/Met metabolizm PLP-dependent pfam01176 10 2 20.0 eIF-1a Translation initiation factor 1A / IF-1 pfam01199 10 2 20.0 Ribosomal_L34e Ribosomal protein L34e pfam01715 10 2 20.0 IPPT IPP transferase pfam02826 10 2 20.0 2-Hacid_dh_C D-isomer specific 2-hydroxyacid pfam02953 10 2 20.0 zf-Tim10_DDP Tim10/DDP family zinc finger pfam05308 10 2 20.0 Mito_fiss_reg Mitochondrial fission regulator pfam06127 10 2 20.0 DUF962 Protein of unknown function (DUF962) pfam13266 10 2 20.0 DUF4057 Protein of unknown function (DUF4057) pfam00169 10 1 10.0 PH PH domain pfam00831 10 1 10.0 Ribosomal_L29 Ribosomal L29 protein pfam01655 10 1 10.0 Ribosomal_L32e Ribosomal protein L32 pfam02874 10 1 10.0 ATP-synt_ab_N ATP synthase alpha/beta family pfam03446 10 1 10.0 NAD_binding_2 NAD binding domain of 6-phosphogluconate pfam04061 10 1 10.0 ORMDL ORMDL family pfam06596 10 1 10.0 PsbX Photosystem II reaction centre X protein (PsbX) pfam15365 10 1 10.0 PNRC Proline-rich nuclear receptor coactivator pfam00327 10 0 0.0 Ribosomal_L30 Ribosomal protein L30p/L7e pfam00380 10 0 0.0 Ribosomal_S9 Ribosomal protein S9/S16 pfam01280 10 0 0.0 Ribosomal_L19e Ribosomal protein L19e pfam02297 10 0 0.0 COX6B Cytochrome oxidase c subunit VIb pfam03040 10 0 0.0 CemA CemA family pfam03143 10 0 0.0 GTP_EFTU_D3 Elongation factor Tu C-terminal domain pfam04561 10 0 0.0 RNA_pol_Rpb2_2 RNA polymerase Rpb2 pfam04572 10 0 0.0 Gb3_synth Alpha 1 pfam05151 10 0 0.0 PsbM Photosystem II reaction centre M protein (PsbM) pfam06911 10 0 0.0 Senescence Senescence-associated protein pfam11833 10 0 0.0 DUF3353 Protein of unknown function (DUF3353) pfam12907 10 0 0.0 zf-met2 Zinc-binding pfam13537 10 0 0.0 GATase_7 Glutamine amidotransferase domain pfam14577 10 0 0.0 SEO_C Sieve element occlusion C-terminus pfam16983 10 0 0.0 MFS_MOT1 Molybdate transporter of MFS superfamily pfam10160 9 10 111.1 Tmemb_40 Predicted membrane protein pfam02577 9 9 100.0 DNase-RNase Bifunctional nuclease pfam14599 9 8 88.9 zinc_ribbon_6 Zinc-ribbon pfam00787 9 7 77.8 PX PX domain pfam01202 9 7 77.8 SKI Shikimate kinase pfam03096 9 7 77.8 Ndr Ndr family pfam03242 9 7 77.8 LEA_3 Late embryogenesis abundant protein pfam03635 9 7 77.8 Vps35 Vacuolar protein sorting-associated protein 35 pfam05495 9 7 77.8 zf-CHY CHY zinc finger pfam12214 9 7 77.8 TPX2_importin Cell cycle regulated microtubule pfam00108 9 6 66.7 Thiolase_N Thiolase pfam02681 9 6 66.7 DUF212 Divergent PAP2 family pfam03029 9 6 66.7 ATP_bind_1 Conserved hypothetical ATP binding protein pfam06943 9 6 66.7 zf-LSD1 LSD1 zinc finger pfam09280 9 6 66.7 XPC-binding XPC-binding domain pfam12576 9 6 66.7 DUF3754 Protein of unknown function (DUF3754) pfam12706 9 6 66.7 Lactamase_B_2 Beta-lactamase superfamily domain pfam13793 9 6 66.7 Pribosyltran_N N-terminal domain of ribose phosphate pfam16495 9 6 66.7 SWIRM-assoc_1 SWIRM-associated region 1 pfam00343 9 5 55.6 Phosphorylase Carbohydrate phosphorylase pfam00962 9 5 55.6 A_deaminase Adenosine/AMP deaminase pfam01428 9 5 55.6 zf-AN1 AN1-like Zinc finger pfam02135 9 5 55.6 zf-TAZ TAZ zinc finger pfam03348 9 5 55.6 Serinc Serine incorporator (Serinc) pfam04791 9 5 55.6 LMBR1 LMBR1-like membrane protein pfam05648 9 5 55.6 PEX11 Peroxisomal biogenesis factor 11 (PEX11) pfam05753 9 5 55.6 TRAP_beta Translocon-associated protein beta (TRAPB) pfam06521 9 5 55.6 PAR1 PAR1 protein pfam06888 9 5 55.6 Put_Phosphatase Putative Phosphatase pfam13905 9 5 55.6 Thioredoxin_8 Thioredoxin-like pfam16879 9 5 55.6 Sin3a_C C-terminal domain of Sin3a protein pfam00382 9 4 44.4 TFIIB Transcription factor TFIIB repeat pfam00625 9 4 44.4 Guanylate_kin Guanylate kinase pfam02127 9 4 44.4 Peptidase_M18 Aminopeptidase I zinc metalloprotease pfam04756 9 4 44.4 OST3_OST6 OST3 / OST6 family pfam04774 9 4 44.4 HABP4_PAI-RBP1 Hyaluronan / mRNA binding family pfam05514 9 4 44.4 HR_lesion HR-like lesion-inducing pfam05834 9 4 44.4 Lycopene_cycl Lycopene cyclase protein pfam06830 9 4 44.4 Root_cap Root cap pfam09409 9 4 44.4 PUB PUB domain pfam14938 9 4 44.4 SNAP Soluble NSF attachment protein pfam15699 9 4 44.4 NPR1_interact NPR1 interacting pfam00208 9 3 33.3 ELFV_dehydrog Glutamate/Leucine/Phenylalanine/Valine pfam00833 9 3 33.3 Ribosomal_S17e Ribosomal S17 pfam01020 9 3 33.3 Ribosomal_L40e Ribosomal L40e family pfam01411 9 3 33.3 tRNA-synt_2c tRNA synthetases class II (A) pfam01583 9 3 33.3 APS_kinase Adenylylsulphate kinase pfam02259 9 3 33.3 FAT FAT domain pfam02737 9 3 33.3 3HCDH_N 3-hydroxyacyl-CoA dehydrogenase pfam04053 9 3 33.3 Coatomer_WDAD Coatomer WD associated region pfam06547 9 3 33.3 DUF1117 Protein of unknown function (DUF1117) pfam07479 9 3 33.3 NAD_Gly3P_dh_C NAD-dependent glycerol-3-phosphate pfam07500 9 3 33.3 TFIIS_M Transcription factor S-II (TFIIS) pfam07571 9 3 33.3 TAF6_C TAF6 C-terminal HEAT repeat domain pfam07946 9 3 33.3 DUF1682 Protein of unknown function (DUF1682) pfam09770 9 3 33.3 PAT1 Topoisomerase II-associated protein PAT1 pfam10502 9 3 33.3 Peptidase_S26 Signal peptidase pfam11960 9 3 33.3 DUF3474 Domain of unknown function (DUF3474) pfam12498 9 3 33.3 bZIP_C Basic leucine-zipper C terminal pfam00166 9 2 22.2 Cpn10 Chaperonin 10 Kd subunit pfam01019 9 2 22.2 G_glu_transpept Gamma-glutamyltranspeptidase pfam01106 9 2 22.2 NifU NifU-like domain pfam01625 9 2 22.2 PMSR Peptide methionine sulfoxide reductase pfam02353 9 2 22.2 CMAS Mycolic acid cyclopropane synthetase pfam02516 9 2 22.2 STT3 Oligosaccharyl transferase STT3 subunit pfam04185 9 2 22.2 Phosphoesterase Phosphoesterase family pfam04601 9 2 22.2 DUF569 Domain of unknown function (DUF569) pfam05153 9 2 22.2 MIOX Myo-inositol oxygenase pfam07839 9 2 22.2 CaM_binding Plant calmodulin-binding domain pfam07993 9 2 22.2 NAD_binding_4 Male sterility protein pfam08534 9 2 22.2 Redoxin Redoxin pfam12352 9 2 22.2 V-SNARE_C Snare region anchored in the vesicle pfam12708 9 2 22.2 Pectate_lyase_3 Pectate lyase superfamily protein pfam13249 9 2 22.2 SQHop_cyclase_N Squalene-hopene cyclase N-terminal pfam13519 9 2 22.2 VWA_2 von Willebrand factor type A domain pfam14204 9 2 22.2 Ribosomal_L18_c Ribosomal L18 C-terminal region pfam00043 9 1 11.1 GST_C Glutathione S-transferase pfam00334 9 1 11.1 NDK Nucleoside diphosphate kinase pfam00366 9 1 11.1 Ribosomal_S17 Ribosomal protein S17 pfam01521 9 1 11.1 Fe-S_biosyn Iron-sulphur cluster biosynthesis pfam01717 9 1 11.1 Meth_synt_2 Cobalamin-independent synthase pfam01777 9 1 11.1 Ribosomal_L27e Ribosomal L27e protein family pfam01920 9 1 11.1 Prefoldin_2 Prefoldin subunit pfam05757 9 1 11.1 PsbQ Oxygen evolving enhancer protein 3 (PsbQ) pfam08245 9 1 11.1 Mur_ligase_M Mur ligase middle domain pfam13513 9 1 11.1 HEAT_EZ HEAT-like repeat pfam16421 9 1 11.1 E2F_CC-MB E2F transcription factor CC-MB domain pfam00119 9 0 0.0 ATP-synt_A ATP synthase A chain pfam00471 9 0 0.0 Ribosomal_L33 Ribosomal protein L33 pfam00827 9 0 0.0 Ribosomal_L15e Ribosomal L15 pfam00996 9 0 0.0 GDI GDP dissociation inhibitor pfam01439 9 0 0.0 Metallothio_2 Metallothionein pfam01701 9 0 0.0 PSI_PsaJ Photosystem I reaction centre subunit IX / pfam01786 9 0 0.0 AOX Alternative oxidase pfam02392 9 0 0.0 Ycf4 Ycf4 pfam03790 9 0 0.0 KNOX1 KNOX1 domain pfam05633 9 0 0.0 DUF793 Protein of unknown function (DUF793) pfam06094 9 0 0.0 GGACT Gamma-glutamyl cyclotransferase pfam06472 9 0 0.0 ABC_membrane_2 ABC transporter transmembrane region 2 pfam08022 9 0 0.0 FAD_binding_8 FAD-binding domain pfam08100 9 0 0.0 Dimerization Dimerization domain pfam13561 9 0 0.0 adh_short_C2 Enoyl-(Acyl carrier protein) reductase pfam14227 9 0 0.0 UBN2_2 gag-polypeptide of LTR copia-type pfam03331 8 10 125.0 LpxC UDP-3-O-acyl N-acetylglycosamine deacetylase pfam03441 8 8 100.0 FAD_binding_7 FAD binding domain of DNA photolyase pfam01293 8 7 87.5 PEPCK_ATP Phosphoenolpyruvate carboxykinase pfam01513 8 7 87.5 NAD_kinase ATP-NAD kinase pfam03637 8 7 87.5 Mob1_phocein Mob1/phocein family pfam05208 8 7 87.5 ALG3 ALG3 protein pfam06418 8 7 87.5 CTP_synth_N CTP synthase N-terminus pfam07851 8 7 87.5 TMPIT TMPIT-like protein pfam01326 8 6 75.0 PPDK_N Pyruvate phosphate dikinase pfam02889 8 6 75.0 Sec63 Sec63 Brl domain pfam00034 8 5 62.5 Cytochrom_C Cytochrome c pfam00852 8 5 62.5 Glyco_transf_10 Glycosyltransferase family 10 pfam01148 8 5 62.5 CTP_transf_1 Cytidylyltransferase family pfam01331 8 5 62.5 mRNA_cap_enzyme mRNA capping enzyme pfam02492 8 5 62.5 cobW CobW/HypB/UreG pfam05875 8 5 62.5 Ceramidase Ceramidase pfam06058 8 5 62.5 DCP1 Dcp1-like decapping family pfam10950 8 5 62.5 DUF2775 Protein of unknown function (DUF2775) pfam11816 8 5 62.5 DUF3337 Domain of unknown function (DUF3337) pfam01406 8 4 50.0 tRNA-synt_1e tRNA synthetases class I (C) catalytic pfam01776 8 4 50.0 Ribosomal_L22e Ribosomal L22e protein family pfam03098 8 4 50.0 An_peroxidase Animal haem peroxidase pfam04542 8 4 50.0 Sigma70_r2 Sigma-70 region 2 pfam07889 8 4 50.0 DUF1664 Protein of unknown function (DUF1664) pfam08583 8 4 50.0 Cmc1 Cytochrome c oxidase biogenesis protein Cmc1 pfam10351 8 4 50.0 Apt1 Golgi-body localization protein domain pfam10513 8 4 50.0 EPL1 Enhancer of polycomb-like pfam11834 8 4 50.0 KHA KHA pfam13232 8 4 50.0 Complex1_LYR_1 Complex1_LYR-like pfam13890 8 4 50.0 Rab3-GTPase_cat Rab3 GTPase-activating protein pfam13943 8 4 50.0 WPP WPP domain pfam16166 8 4 50.0 TIC20 Chloroplast import apparatus Tic20-like pfam00092 8 3 37.5 VWA von Willebrand factor type A domain pfam00101 8 3 37.5 RuBisCO_small Ribulose bisphosphate carboxylase pfam00174 8 3 37.5 Oxidored_molyb Oxidoreductase molybdopterin binding pfam00298 8 3 37.5 Ribosomal_L11 Ribosomal protein L11 pfam00326 8 3 37.5 Peptidase_S9 Prolyl oligopeptidase family pfam00832 8 3 37.5 Ribosomal_L39 Ribosomal L39 protein pfam00834 8 3 37.5 Ribul_P_3_epim Ribulose-phosphate 3 epimerase family pfam01380 8 3 37.5 SIS SIS domain pfam01779 8 3 37.5 Ribosomal_L29e Ribosomal L29e protein family pfam01853 8 3 37.5 MOZ_SAS MOZ/SAS family pfam02213 8 3 37.5 GYF GYF domain pfam03600 8 3 37.5 CitMHS Citrate transporter pfam03896 8 3 37.5 TRAP_alpha Translocon-associated protein (TRAP) pfam04607 8 3 37.5 RelA_SpoT Region found in RelA / SpoT proteins pfam05097 8 3 37.5 DUF688 Protein of unknown function (DUF688) pfam05362 8 3 37.5 Lon_C Lon protease (S16) C-terminal proteolytic domain pfam13426 8 3 37.5 PAS_9 PAS domain pfam13771 8 3 37.5 zf-HC5HC2H PHD-like zinc-binding domain pfam15782 8 3 37.5 GREB1 Gene regulated by oestrogen in breast cancer pfam00717 8 2 25.0 Peptidase_S24 Peptidase S24-like pfam00857 8 2 25.0 Isochorismatase Isochorismatase family pfam01015 8 2 25.0 Ribosomal_S3Ae Ribosomal S3Ae family pfam01090 8 2 25.0 Ribosomal_S19e Ribosomal protein S19e pfam01283 8 2 25.0 Ribosomal_S26e Ribosomal protein S26e pfam01641 8 2 25.0 SelR SelR domain pfam01663 8 2 25.0 Phosphodiest Type I phosphodiesterase / nucleotide pfam01676 8 2 25.0 Metalloenzyme Metalloenzyme superfamily pfam01873 8 2 25.0 eIF-5_eIF-2B Domain found in IF2B/IF5 pfam02574 8 2 25.0 S-methyl_trans Homocysteine S-methyltransferase pfam02861 8 2 25.0 Clp_N Clp amino terminal domain pfam02966 8 2 25.0 DIM1 Mitosis protein DIM1 pfam03959 8 2 25.0 FSH1 Serine hydrolase (FSH1) pfam04366 8 2 25.0 Ysc84 Las17-binding protein actin regulator pfam04588 8 2 25.0 HIG_1_N Hypoxia induced protein conserved region pfam04950 8 2 25.0 RIBIOP_C 40S ribosome biogenesis protein Tsr1 and BMS1 pfam05091 8 2 25.0 eIF-3_zeta Eukaryotic translation initiation factor 3 pfam05183 8 2 25.0 RdRP RNA dependent RNA polymerase pfam05529 8 2 25.0 Bap31 B-cell receptor-associated protein 31-like pfam06027 8 2 25.0 SLC35F Solute carrier family 35 pfam06966 8 2 25.0 DUF1295 Protein of unknown function (DUF1295) pfam09801 8 2 25.0 SYS1 Integral membrane protein S linking to the trans pfam12569 8 2 25.0 NARP1 NMDA receptor-regulated protein 1 pfam00549 8 1 12.5 Ligase_CoA CoA-ligase pfam00551 8 1 12.5 Formyl_trans_N Formyl transferase pfam00578 8 1 12.5 AhpC-TSA AhpC/TSA family pfam00584 8 1 12.5 SecE SecE/Sec61-gamma subunits of protein pfam00694 8 1 12.5 Aconitase_C Aconitase C-terminal domain pfam01198 8 1 12.5 Ribosomal_L31e Ribosomal protein L31e pfam01247 8 1 12.5 Ribosomal_L35Ae Ribosomal protein L35Ae pfam02996 8 1 12.5 Prefoldin Prefoldin subunit pfam03152 8 1 12.5 UFD1 Ubiquitin fusion degradation protein UFD1 pfam03381 8 1 12.5 CDC50 LEM3 (ligand-effect modulator 3) family / CDC50 pfam03822 8 1 12.5 NAF NAF domain pfam04783 8 1 12.5 DUF630 Protein of unknown function (DUF630) pfam05794 8 1 12.5 Tcp11 T-complex protein 11 pfam07107 8 1 12.5 WI12 Wound-induced protein WI12 pfam09366 8 1 12.5 DUF1997 Protein of unknown function (DUF1997) pfam10252 8 1 12.5 PP28 Casein kinase substrate phosphoprotein PP28 pfam10557 8 1 12.5 Cullin_Nedd8 Cullin protein neddylation domain pfam10914 8 1 12.5 DUF2781 Protein of unknown function (DUF2781) pfam12070 8 1 12.5 DUF3550 Protein of unknown function (DUF3550/UPF0682) pfam12638 8 1 12.5 Staygreen Staygreen protein pfam13302 8 1 12.5 Acetyltransf_3 Acetyltransferase (GNAT) domain pfam13460 8 1 12.5 NAD_binding_10 NAD(P)H-binding pfam13869 8 1 12.5 NUDIX_2 Nucleotide hydrolase pfam00967 8 0 0.0 Barwin Barwin family pfam01282 8 0 0.0 Ribosomal_S24e Ribosomal protein S24e pfam02419 8 0 0.0 PsbL PsbL protein pfam05562 8 0 0.0 WCOR413 Cold acclimation protein WCOR413 pfam08137 8 0 0.0 DVL DVL family pfam08523 8 0 0.0 MBF1 Multiprotein bridging factor 1 pfam09229 8 0 0.0 Aha1_N Activator of Hsp90 ATPase pfam12222 8 0 0.0 PNGaseA Peptide N-acetyl-beta-D-glucosaminyl pfam13193 8 0 0.0 AMP-binding_C AMP-binding enzyme C-terminal domain pfam01026 7 8 114.3 TatD_DNase TatD related DNase pfam01169 7 7 100.0 UPF0016 Uncharacterized protein family UPF0016 pfam01191 7 7 100.0 RNA_pol_Rpb5_C RNA polymerase Rpb5 pfam00328 7 6 85.7 His_Phos_2 Histidine phosphatase superfamily (branch pfam01086 7 6 85.7 Clathrin_lg_ch Clathrin light chain pfam02141 7 6 85.7 DENN DENN (AEX-3) domain pfam02265 7 6 85.7 S1-P1_nuclease S1/P1 Nuclease pfam03033 7 6 85.7 Glyco_transf_28 Glycosyltransferase family 28 pfam03194 7 6 85.7 LUC7 LUC7 N_terminus pfam04199 7 6 85.7 Cyclase Putative cyclase pfam04777 7 6 85.7 Evr1_Alr Erv1 / Alr family pfam08432 7 6 85.7 Vfa1 AAA-ATPase Vps4-associated protein 1 pfam11498 7 6 85.7 Activator_LAG-3 Transcriptional activator LAG-3 pfam12174 7 6 85.7 RST RCD1-SRO-TAF4 (RST) plant domain pfam00352 7 5 71.4 TBP Transcription factor TFIID (or TATA-binding pfam01249 7 5 71.4 Ribosomal_S21e Ribosomal protein S21e pfam02207 7 5 71.4 zf-UBR Putative zinc finger in N-recognin (UBR box) pfam03399 7 5 71.4 SAC3_GANP SAC3/GANP/Nin1/mts3/eIF-3 p25 family pfam03439 7 5 71.4 Spt5-NGN Early transcription elongation factor of RNA pfam04278 7 5 71.4 Tic22 Tic22-like family pfam05193 7 5 71.4 Peptidase_M16_C Peptidase M16 inactive domain pfam05667 7 5 71.4 DUF812 Protein of unknown function (DUF812) pfam07707 7 5 71.4 BACK BTB And C-terminal Kelch pfam10585 7 5 71.4 UBA_e1_thiolCys Ubiquitin-activating enzyme active pfam12348 7 5 71.4 CLASP_N CLASP N terminal pfam00128 7 4 57.1 Alpha-amylase Alpha amylase pfam01477 7 4 57.1 PLAT PLAT/LH2 domain pfam03255 7 4 57.1 ACCA Acetyl co-enzyme A carboxylase carboxyltransferase pfam04004 7 4 57.1 Leo1 Leo1-like protein pfam04752 7 4 57.1 ChaC ChaC-like protein pfam04815 7 4 57.1 Sec23_helical Sec23/Sec24 helical domain pfam05608 7 4 57.1 DUF778 Protein of unknown function (DUF778) pfam06963 7 4 57.1 FPN1 Ferroportin1 (FPN1) pfam08214 7 4 57.1 HAT_KAT11 Histone acetylation protein pfam12166 7 4 57.1 Piezo_RRas_bdg Piezo non-specific cation channel pfam12738 7 4 57.1 PTCB-BRCT twin BRCT domain pfam13418 7 4 57.1 Kelch_4 Galactose oxidase pfam13774 7 4 57.1 Longin Regulated-SNARE-like domain pfam13867 7 4 57.1 SAP30_Sin3_bdg Sin3 binding region of histone pfam13883 7 4 57.1 Pyrid_oxidase_2 Pyridoxamine 5'-phosphate oxidase pfam16906 7 4 57.1 Ribosomal_L26 Ribosomal proteins L26 eukaryotic pfam00079 7 3 42.9 Serpin Serpin (serine protease inhibitor) pfam00154 7 3 42.9 RecA recA bacterial DNA recombination protein pfam00448 7 3 42.9 SRP54 SRP54-type protein pfam00535 7 3 42.9 Glycos_transf_2 Glycosyl transferase family 2 pfam00817 7 3 42.9 IMS impB/mucB/samB family pfam01000 7 3 42.9 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain pfam01177 7 3 42.9 Asp_Glu_race Asp/Glu/Hydantoin racemase pfam01207 7 3 42.9 Dus Dihydrouridine synthase (Dus) pfam01251 7 3 42.9 Ribosomal_S7e Ribosomal protein S7e pfam01496 7 3 42.9 V_ATPase_I V-type ATPase 116kDa subunit family pfam01507 7 3 42.9 PAPS_reduct Phosphoadenosine phosphosulfate reductase pfam01780 7 3 42.9 Ribosomal_L37ae Ribosomal L37ae protein family pfam02922 7 3 42.9 CBM_48 Carbohydrate-binding module 48 (Isoamylase pfam04096 7 3 42.9 Nucleoporin2 Nucleoporin autopeptidase pfam04734 7 3 42.9 Ceramidase_alk Neutral/alkaline non-lysosomal pfam06825 7 3 42.9 HSBP1 Heat shock factor binding protein 1 pfam08729 7 3 42.9 HUN HPC2 and ubinuclein domain pfam10237 7 3 42.9 N6-adenineMlase Probable N6-adenine methyltransferase pfam12014 7 3 42.9 DUF3506 Domain of unknown function (DUF3506) pfam13177 7 3 42.9 DNA_pol3_delta2 DNA polymerase III pfam13474 7 3 42.9 SnoaL_3 SnoaL-like domain pfam16123 7 3 42.9 HAGH_C Hydroxyacylglutathione hydrolase C-terminus pfam00342 7 2 28.6 PGI Phosphoglucose isomerase pfam00393 7 2 28.6 6PGD 6-phosphogluconate dehydrogenase pfam00425 7 2 28.6 Chorismate_bind chorismate binding enzyme pfam00456 7 2 28.6 Transketolase_N Transketolase pfam00630 7 2 28.6 Filamin Filamin/ABP280 repeat pfam00940 7 2 28.6 RNA_pol DNA-dependent RNA polymerase pfam01230 7 2 28.6 HIT HIT domain pfam01294 7 2 28.6 Ribosomal_L13e Ribosomal protein L13e pfam01333 7 2 28.6 Apocytochr_F_C Apocytochrome F pfam01435 7 2 28.6 Peptidase_M48 Peptidase family M48 pfam01936 7 2 28.6 NYN NYN domain pfam02099 7 2 28.6 Josephin Josephin pfam02319 7 2 28.6 E2F_TDP E2F/DP family winged-helix DNA-binding domain pfam03070 7 2 28.6 TENA_THI-4 TENA/THI-4/PQQC family pfam03501 7 2 28.6 S10_plectin Plectin/S10 domain pfam03874 7 2 28.6 RNA_pol_Rpb4 RNA polymerase Rpb4 pfam03946 7 2 28.6 Ribosomal_L11_N Ribosomal protein L11 pfam04091 7 2 28.6 Sec15 Exocyst complex subunit Sec15-like pfam04193 7 2 28.6 PQ-loop PQ loop repeat pfam04718 7 2 28.6 ATP-synt_G Mitochondrial ATP synthase g subunit pfam04757 7 2 28.6 Pex2_Pex12 Pex2 / Pex12 amino terminal region pfam04979 7 2 28.6 IPP-2 Protein phosphatase inhibitor 2 (IPP-2) pfam05899 7 2 28.6 Cupin_3 Protein of unknown function (DUF861) pfam06414 7 2 28.6 Zeta_toxin Zeta toxin pfam07123 7 2 28.6 PsbW Photosystem II reaction centre W protein (PsbW) pfam07173 7 2 28.6 DUF1399 Protein of unknown function (DUF1399) pfam07466 7 2 28.6 DUF1517 Protein of unknown function (DUF1517) pfam07888 7 2 28.6 CALCOCO1 Calcium binding and coiled-coil domain pfam08542 7 2 28.6 Rep_fac_C Replication factor C C-terminal domain pfam08743 7 2 28.6 Nse4_C Nse4 C-terminal pfam08766 7 2 28.6 DEK_C DEK C terminal domain pfam12313 7 2 28.6 NPR1_like_C NPR1/NIM1 like defence protein C terminal pfam13410 7 2 28.6 GST_C_2 Glutathione S-transferase pfam16709 7 2 28.6 SCAB-IgPH Fused Ig-PH domain of plant-specific pfam16987 7 2 28.6 KIX_2 KIX domain pfam00206 7 1 14.3 Lyase_1 Lyase pfam00355 7 1 14.3 Rieske Rieske [2Fe-2S] domain pfam00622 7 1 14.3 SPRY SPRY domain pfam00682 7 1 14.3 HMGL-like HMGL-like pfam00773 7 1 14.3 RNB RNB domain pfam01048 7 1 14.3 PNP_UDP_1 Phosphorylase superfamily pfam03127 7 1 14.3 GAT GAT domain pfam04652 7 1 14.3 Vta1 Vta1 like pfam06426 7 1 14.3 SATase_N Serine acetyltransferase pfam12807 7 1 14.3 eIF3_p135 Translation initiation factor eIF3 subunit pfam13847 7 1 14.3 Methyltransf_31 Methyltransferase domain pfam14661 7 1 14.3 HAUS6_N HAUS augmin-like complex subunit 6 N-terminus pfam00436 7 0 0.0 SSB Single-strand binding protein family pfam00499 7 0 0.0 Oxidored_q3 NADH-ubiquinone/plastoquinone pfam00507 7 0 0.0 Oxidored_q4 NADH-ubiquinone/plastoquinone pfam01126 7 0 0.0 Heme_oxygenase Heme oxygenase pfam01652 7 0 0.0 IF4E Eukaryotic initiation factor 4E pfam02221 7 0 0.0 E1_DerP2_DerF2 ML domain pfam02775 7 0 0.0 TPP_enzyme_C Thiamine pyrophosphate enzyme pfam03059 7 0 0.0 NAS Nicotianamine synthase protein pfam04450 7 0 0.0 BSP Peptidase of plants and bacteria pfam07734 7 0 0.0 FBA_1 F-box associated pfam07995 7 0 0.0 GSDH Glucose / Sorbosone dehydrogenase pfam09790 7 0 0.0 Hyccin Hyccin pfam13085 7 0 0.0 Fer2_3 2Fe-2S iron-sulfur cluster binding domain pfam14604 7 0 0.0 SH3_9 Variant SH3 domain pfam15697 7 0 0.0 DUF4666 Domain of unknown function (DUF4666) pfam15628 6 8 133.3 RRM_DME RRM in Demeter pfam00753 6 7 116.7 Lactamase_B Metallo-beta-lactamase superfamily pfam02194 6 7 116.7 PXA PXA domain pfam04959 6 7 116.7 ARS2 Arsenite-resistance protein 2 pfam02375 6 6 100.0 JmjN jmjN domain pfam03467 6 6 100.0 Smg4_UPF3 Smg-4/UPF3 family pfam16136 6 6 100.0 NINJA_B Putative nuclear localization signal pfam00210 6 5 83.3 Ferritin Ferritin-like domain pfam00246 6 5 83.3 Peptidase_M14 Zinc carboxypeptidase pfam00472 6 5 83.3 RF-1 RF-1 domain pfam01157 6 5 83.3 Ribosomal_L21e Ribosomal protein L21e pfam02732 6 5 83.3 ERCC4 ERCC4 domain pfam03462 6 5 83.3 PCRF PCRF domain pfam04157 6 5 83.3 EAP30 EAP30/Vps36 family pfam04424 6 5 83.3 DUF544 Protein of unknown function (DUF544) pfam04483 6 5 83.3 DUF565 Protein of unknown function (DUF565) pfam05176 6 5 83.3 ATP-synt_10 ATP10 protein pfam05278 6 5 83.3 PEARLI-4 Arabidopsis phospholipase-like protein (PEARLI pfam07933 6 5 83.3 DUF1681 Protein of unknown function (DUF1681) pfam09258 6 5 83.3 Glyco_transf_64 Glycosyl transferase family 64 domain pfam09726 6 5 83.3 Macoilin Transmembrane protein pfam10243 6 5 83.3 MIP-T3 Microtubule-binding protein MIP-T3 pfam10602 6 5 83.3 RPN7 26S proteasome subunit RPN7 pfam00639 6 4 66.7 Rotamase PPIC-type PPIASE domain pfam00953 6 4 66.7 Glycos_transf_4 Glycosyl transferase family 4 pfam01728 6 4 66.7 FtsJ FtsJ-like methyltransferase pfam01846 6 4 66.7 FF FF domain pfam02020 6 4 66.7 W2 eIF4-gamma/eIF5/eIF2-epsilon pfam04080 6 4 66.7 Per1 Per1-like pfam04949 6 4 66.7 Transcrip_act Transcriptional activator pfam05004 6 4 66.7 IFRD Interferon-related developmental regulator (IFRD) pfam05255 6 4 66.7 UPF0220 uncharacterized protein family (UPF0220) pfam07766 6 4 66.7 LETM1 LETM1-like protein pfam08059 6 4 66.7 SEP SEP domain pfam08211 6 4 66.7 dCMP_cyt_deam_2 Cytidine and deoxycytidylate deaminase pfam08644 6 4 66.7 SPT16 FACT complex subunit (SPT16/CDC68) pfam08784 6 4 66.7 RPA_C Replication protein A C terminal pfam12315 6 4 66.7 DUF3633 Protein of unknown function (DUF3633) pfam12436 6 4 66.7 USP7_ICP0_bdg ICP0-binding domain of Ubiquitin-specific pfam12812 6 4 66.7 PDZ_1 PDZ-like domain pfam13716 6 4 66.7 CRAL_TRIO_2 Divergent CRAL/TRIO domain pfam15519 6 4 66.7 RBM39linker linker between RRM2 and RRM3 domains in pfam16455 6 4 66.7 UBD Ubiquitin-binding domain pfam16529 6 4 66.7 Ge1_WD40 WD40 region of Ge1 pfam16953 6 4 66.7 PRORP Protein-only RNase P pfam00533 6 3 50.0 BRCT BRCA1 C Terminus (BRCT) domain pfam00596 6 3 50.0 Aldolase_II Class II Aldolase and Adducin N-terminal pfam01187 6 3 50.0 MIF Macrophage migration inhibitory factor (MIF) pfam01432 6 3 50.0 Peptidase_M3 Peptidase family M3 pfam01474 6 3 50.0 DAHP_synth_2 Class-II DAHP synthetase family pfam01743 6 3 50.0 PolyA_pol Poly A polymerase head domain pfam02089 6 3 50.0 Palm_thioest Palmitoyl protein thioesterase pfam02582 6 3 50.0 DUF155 uncharacterized ACR pfam02657 6 3 50.0 SufE Fe-S metabolizm associated domain pfam02786 6 3 50.0 CPSase_L_D2 Carbamoyl-phosphate synthase L chain pfam02897 6 3 50.0 Peptidase_S9_N Prolyl oligopeptidase pfam03164 6 3 50.0 Mon1 Trafficking protein Mon1 pfam03179 6 3 50.0 V-ATPase_G Vacuolar (H+)-ATPase G subunit pfam03227 6 3 50.0 GILT Gamma interferon inducible lysosomal thiol pfam03911 6 3 50.0 Sec61_beta Sec61beta family pfam04628 6 3 50.0 Sedlin_N Sedlin pfam04685 6 3 50.0 DUF608 Protein of unknown function pfam04689 6 3 50.0 S1FA DNA binding protein S1FA pfam05129 6 3 50.0 Elf1 Transcription elongation factor Elf1 like pfam06548 6 3 50.0 Kinesin-related Kinesin-related pfam07522 6 3 50.0 DRMBL DNA repair metallo-beta-lactamase pfam07798 6 3 50.0 DUF1640 Protein of unknown function (DUF1640) pfam08442 6 3 50.0 ATP-grasp_2 ATP-grasp domain pfam08627 6 3 50.0 CRT-like CRT-like pfam08646 6 3 50.0 Rep_fac-A_C Replication factor-A C terminal domain pfam09733 6 3 50.0 VEFS-Box VEFS-Box of polycomb protein pfam10163 6 3 50.0 EnY2 Transcription factor e(y)2 pfam10433 6 3 50.0 MMS1_N Mono-functional DNA-alkylating methyl pfam10609 6 3 50.0 ParA NUBPL iron-transfer P-loop NTPase pfam14538 6 3 50.0 Raptor_N Raptor N-terminal CASPase like domain pfam16870 6 3 50.0 OxoGdeHyase_C 2-oxoglutarate dehydrogenase C-terminal pfam00268 6 2 33.3 Ribonuc_red_sm Ribonucleotide reductase pfam00337 6 2 33.3 Gal-bind_lectin Galactoside-binding lectin pfam00432 6 2 33.3 Prenyltrans Prenyltransferase and squalene oxidase pfam00777 6 2 33.3 Glyco_transf_29 Glycosyltransferase family 29 pfam00829 6 2 33.3 Ribosomal_L21p Ribosomal prokaryotic L21 protein pfam01096 6 2 33.3 TFIIS_C Transcription factor S-II (TFIIS) pfam01200 6 2 33.3 Ribosomal_S28e Ribosomal protein S28e pfam01557 6 2 33.3 FAA_hydrolase Fumarylacetoacetate (FAA) hydrolase pfam01571 6 2 33.3 GCV_T Aminomethyltransferase folate-binding domain pfam01747 6 2 33.3 ATP-sulfurylase ATP-sulfurylase pfam01990 6 2 33.3 ATP-synt_F ATP synthase (F/14-kDa) subunit pfam02738 6 2 33.3 Ald_Xan_dh_C2 Molybdopterin-binding domain of aldehyde pfam02782 6 2 33.3 FGGY_C FGGY family of carbohydrate kinases pfam02878 6 2 33.3 PGM_PMM_I Phosphoglucomutase/phosphomannomutase pfam02984 6 2 33.3 Cyclin_C Cyclin pfam03219 6 2 33.3 TLC TLC ATP/ADP transporter pfam03351 6 2 33.3 DOMON DOMON domain pfam03735 6 2 33.3 ENT ENT domain pfam03770 6 2 33.3 IPK Inositol polyphosphate kinase pfam04006 6 2 33.3 Mpp10 Mpp10 protein pfam04389 6 2 33.3 Peptidase_M28 Peptidase family M28 pfam04699 6 2 33.3 P16-Arc ARP2/3 complex 16 kDa subunit (p16-Arc) pfam04733 6 2 33.3 Coatomer_E Coatomer epsilon subunit pfam04795 6 2 33.3 PAPA-1 PAPA-1-like conserved region pfam05063 6 2 33.3 MT-A70 MT-A70 pfam05132 6 2 33.3 RNA_pol_Rpc4 RNA polymerase III RPC4 pfam05147 6 2 33.3 LANC_like Lanthionine synthetase C-like protein pfam05182 6 2 33.3 Fip1 Fip1 motif pfam05493 6 2 33.3 ATP_synt_H ATP synthase subunit H pfam06760 6 2 33.3 DUF1221 Protein of unknown function (DUF1221) pfam06764 6 2 33.3 DUF1223 Protein of unknown function (DUF1223) pfam07722 6 2 33.3 Peptidase_C26 Peptidase C26 pfam07741 6 2 33.3 BRF1 Brf1-like TBP-binding domain pfam08325 6 2 33.3 WLM WLM domain pfam08540 6 2 33.3 HMG_CoA_synt_C Hydroxymethylglutaryl-coenzyme A pfam08781 6 2 33.3 DP Transcription factor DP pfam09174 6 2 33.3 Maf1 Maf1 regulator pfam10075 6 2 33.3 CSN8_PSD8_EIF3K CSN8/PSMD8/EIF3K family pfam13225 6 2 33.3 DUF4033 Domain of unknown function (DUF4033) pfam13378 6 2 33.3 MR_MLE_C Enolase C-terminal domain-like pfam13692 6 2 33.3 Glyco_trans_1_4 Glycosyl transferases group 1 pfam14566 6 2 33.3 PTPlike_phytase Inositol hexakisphosphate pfam16294 6 2 33.3 RSB_motif RNSP1-SAP18 binding (RSB) motif pfam00213 6 1 16.7 OSCP ATP synthase delta (OSCP) subunit pfam00398 6 1 16.7 RrnaAD Ribosomal RNA adenine dimethylase pfam00463 6 1 16.7 ICL Isocitrate lyase family pfam00466 6 1 16.7 Ribosomal_L10 Ribosomal protein L10 pfam00567 6 1 16.7 TUDOR Tudor domain pfam00679 6 1 16.7 EFG_C Elongation factor G C-terminus pfam00830 6 1 16.7 Ribosomal_L28 Ribosomal L28 family pfam01159 6 1 16.7 Ribosomal_L6e Ribosomal protein L6e pfam01408 6 1 16.7 GFO_IDH_MocA Oxidoreductase family pfam02620 6 1 16.7 DUF177 Uncharacterized ACR pfam02806 6 1 16.7 Alpha-amylase_C Alpha amylase pfam03737 6 1 16.7 Methyltransf_6 Demethylmenaquinone methyltransferase pfam03760 6 1 16.7 LEA_1 Late embryogenesis abundant (LEA) group 1 pfam04003 6 1 16.7 Utp12 Dip2/Utp12 Family pfam04442 6 1 16.7 CtaG_Cox11 Cytochrome c oxidase assembly protein pfam04597 6 1 16.7 Ribophorin_I Ribophorin I pfam04900 6 1 16.7 Fcf1 Fcf1 pfam06479 6 1 16.7 Ribonuc_2-5A Ribonuclease 2-5A pfam06999 6 1 16.7 Suc_Fer-like Sucrase/ferredoxin-like pfam07524 6 1 16.7 Bromo_TP Bromodomain associated pfam07738 6 1 16.7 Sad1_UNC Sad1 / UNC-like C-terminal pfam07779 6 1 16.7 Cas1_AcylT 10 TM Acyl Transferase domain found in pfam08069 6 1 16.7 Ribosomal_S13_N Ribosomal S13/S15 N-terminal domain pfam08417 6 1 16.7 PaO Pheophorbide a oxygenase pfam08551 6 1 16.7 DUF1751 Eukaryotic integral membrane protein (DUF1751) pfam09353 6 1 16.7 DUF1995 Domain of unknown function (DUF1995) pfam13664 6 1 16.7 DUF4149 Domain of unknown function (DUF4149) pfam14237 6 1 16.7 DUF4339 Domain of unknown function (DUF4339) pfam17067 6 1 16.7 RPS31 Ribosomal protein S31e pfam00285 6 0 0.0 Citrate_synt Citrate synthase pfam00477 6 0 0.0 LEA_5 Small hydrophilic plant seed protein pfam00514 6 0 0.0 Arm Armadillo/beta-catenin-like repeat pfam00737 6 0 0.0 PsbH Photosystem II 10 kDa phosphoprotein pfam00920 6 0 0.0 ILVD_EDD Dehydratase family pfam01912 6 0 0.0 eIF-6 eIF-6 family pfam01946 6 0 0.0 Thi4 Thi4 family pfam02140 6 0 0.0 Gal_Lectin Galactose binding lectin domain pfam02219 6 0 0.0 MTHFR Methylenetetrahydrofolate reductase pfam02229 6 0 0.0 PC4 Transcriptional Coactivator p15 (PC4) pfam02325 6 0 0.0 YGGT YGGT family pfam02347 6 0 0.0 GDC-P Glycine cleavage system P-protein pfam02622 6 0 0.0 DUF179 Uncharacterized ACR pfam02801 6 0 0.0 Ketoacyl-synt_C Beta-ketoacyl synthase pfam03719 6 0 0.0 Ribosomal_S5_C Ribosomal protein S5 pfam03939 6 0 0.0 Ribosomal_L23eN Ribosomal protein L23 pfam04042 6 0 0.0 DNA_pol_E_B DNA polymerase alpha/epsilon subunit B pfam04073 6 0 0.0 tRNA_edit Aminoacyl-tRNA editing domain pfam04539 6 0 0.0 Sigma70_r3 Sigma-70 region 3 pfam05817 6 0 0.0 Ribophorin_II Oligosaccharyltransferase subunit pfam06232 6 0 0.0 ATS3 Embryo-specific protein 3 pfam06884 6 0 0.0 DUF1264 Protein of unknown function (DUF1264) pfam06916 6 0 0.0 DUF1279 Protein of unknown function (DUF1279) pfam07491 6 0 0.0 PPI_Ypi1 Protein phosphatase inhibitor pfam07774 6 0 0.0 DUF1620 Protein of unknown function (DUF1620) pfam08783 6 0 0.0 DWNN DWNN domain pfam10215 6 0 0.0 Ost4 Oligosaccaryltransferase pfam13508 6 0 0.0 Acetyltransf_7 Acetyltransferase (GNAT) domain pfam14380 6 0 0.0 WAK_assoc Wall-associated receptor kinase C-terminal pfam17123 6 0 0.0 zf-RING_11 RING-like zinc finger pfam05008 5 7 140.0 V-SNARE Vesicle transport v-SNARE protein N-terminus pfam09588 5 7 140.0 YqaJ YqaJ-like viral recombinase domain pfam10143 5 7 140.0 PhosphMutase 2 pfam04109 5 6 120.0 APG9 Autophagy protein Apg9 pfam15346 5 6 120.0 ARGLU Arginine and glutamate-rich 1 pfam00890 5 5 100.0 FAD_binding_2 FAD binding domain pfam01158 5 5 100.0 Ribosomal_L36e Ribosomal protein L36e pfam01541 5 5 100.0 GIY-YIG GIY-YIG catalytic domain pfam01648 5 5 100.0 ACPS 4'-phosphopantetheinyl transferase superfamily pfam03222 5 5 100.0 Trp_Tyr_perm Tryptophan/tyrosine permease family pfam03368 5 5 100.0 Dicer_dimer Dicer dimerization domain pfam04153 5 5 100.0 NOT2_3_5 NOT2 / NOT3 / NOT5 family pfam05346 5 5 100.0 DUF747 Eukaryotic membrane protein family pfam10248 5 5 100.0 Mlf1IP Myelodysplasia-myeloid leukemia factor pfam10419 5 5 100.0 TFIIIC_sub6 TFIIIC subunit pfam13563 5 5 100.0 2_5_RNA_ligase2 2'-5' RNA ligase superfamily pfam01981 5 4 80.0 PTH2 Peptidyl-tRNA hydrolase PTH2 pfam02223 5 4 80.0 Thymidylate_kin Thymidylate kinase pfam02891 5 4 80.0 zf-MIZ MIZ/SP-RING zinc finger pfam03847 5 4 80.0 TFIID_20kDa Transcription initiation factor TFIID pfam04045 5 4 80.0 P34-Arc Arp2/3 complex pfam04810 5 4 80.0 zf-Sec23_Sec24 Sec23/Sec24 zinc finger pfam04855 5 4 80.0 SNF5 SNF5 / SMARCB1 / INI1 pfam05915 5 4 80.0 DUF872 Eukaryotic protein of unknown function (DUF872) pfam06351 5 4 80.0 Allene_ox_cyc Allene oxide cyclase pfam06602 5 4 80.0 Myotub-related Myotubularin-like phosphatase domain pfam07967 5 4 80.0 zf-C3HC C3HC zinc finger-like pfam07994 5 4 80.0 NAD_binding_5 Myo-inositol-1-phosphate synthase pfam08356 5 4 80.0 EF_assoc_2 EF hand associated pfam10172 5 4 80.0 DDA1 Det1 complexing ubiquitin ligase pfam10225 5 4 80.0 DUF2215 Uncharacterized conserved protein (DUF2215) pfam12584 5 4 80.0 TRAPPC10 Trafficking protein particle complex subunit 10 pfam12931 5 4 80.0 Sec16_C Sec23-binding domain of Sec16 pfam12999 5 4 80.0 PRKCSH-like Glucosidase II beta subunit-like pfam13889 5 4 80.0 Chromosome_seg Chromosome segregation during meiosis pfam16041 5 4 80.0 DUF4793 Domain of unknown function (DUF4793) pfam16121 5 4 80.0 40S_S4_C 40S ribosomal protein S4 C-terminus pfam00623 5 3 60.0 RNA_pol_Rpb1_2 RNA polymerase Rpb1 pfam00736 5 3 60.0 EF1_GNE EF-1 guanine nucleotide exchange domain pfam01068 5 3 60.0 DNA_ligase_A_M ATP dependent DNA ligase domain pfam01135 5 3 60.0 PCMT Protein-L-isoaspartate(D-aspartate) pfam01212 5 3 60.0 Beta_elim_lyase Beta-eliminating lyase pfam01269 5 3 60.0 Fibrillarin Fibrillarin pfam01661 5 3 60.0 Macro Macro domain pfam01812 5 3 60.0 5-FTHF_cyc-lig 5-formyltetrahydrofolate cyclo-ligase pfam01858 5 3 60.0 RB_A Retinoblastoma-associated protein A domain pfam01956 5 3 60.0 DUF106 Integral membrane protein DUF106 pfam02037 5 3 60.0 SAP SAP domain pfam02238 5 3 60.0 COX7a Cytochrome c oxidase subunit VIIa pfam02427 5 3 60.0 PSI_PsaE Photosystem I reaction centre subunit IV / pfam02545 5 3 60.0 Maf Maf-like protein pfam02567 5 3 60.0 PhzC-PhzF Phenazine biosynthesis-like protein pfam02713 5 3 60.0 DUF220 Domain of unknown function DUF220 pfam02799 5 3 60.0 NMT_C Myristoyl-CoA:protein N-myristoyltransferase pfam02862 5 3 60.0 DDHD DDHD domain pfam02887 5 3 60.0 PK_C Pyruvate kinase pfam03099 5 3 60.0 BPL_LplA_LipB Biotin/lipoate A/B protein ligase family pfam03332 5 3 60.0 PMM Eukaryotic phosphomannomutase pfam03644 5 3 60.0 Glyco_hydro_85 Glycosyl hydrolase family 85 pfam03942 5 3 60.0 DTW DTW domain pfam04194 5 3 60.0 PDCD2_C Programmed cell death protein 2 pfam04616 5 3 60.0 Glyco_hydro_43 Glycosyl hydrolases family 43 pfam05365 5 3 60.0 UCR_UQCRX_QCR9 Ubiquinol-cytochrome C reductase pfam05557 5 3 60.0 MAD Mitotic checkpoint protein pfam06682 5 3 60.0 SARAF SOCE-associated regulatory factor of calcium pfam06733 5 3 60.0 DEAD_2 DEAD_2 pfam07819 5 3 60.0 PGAP1 PGAP1-like protein pfam07842 5 3 60.0 GCFC GC-rich sequence DNA-binding factor-like protein pfam10033 5 3 60.0 ATG13 Autophagy-related protein 13 pfam10367 5 3 60.0 Vps39_2 Vacuolar sorting protein 39 domain 2 pfam13768 5 3 60.0 VWA_3 von Willebrand factor type A domain pfam13963 5 3 60.0 Transpos_assoc Transposase-associated domain pfam16897 5 3 60.0 MMR_HSR1_Xtn C-terminal region of MMR_HSR1 domain pfam16908 5 3 60.0 VPS13 Vacuolar sorting-associated protein 13 pfam00044 5 2 40.0 Gp_dh_N Glyceraldehyde 3-phosphate dehydrogenase pfam00310 5 2 40.0 GATase_2 Glutamine amidotransferases class-II pfam00441 5 2 40.0 Acyl-CoA_dh_1 Acyl-CoA dehydrogenase pfam00728 5 2 40.0 Glyco_hydro_20 Glycosyl hydrolase family 20 pfam00769 5 2 40.0 ERM Ezrin/radixin/moesin family pfam00875 5 2 40.0 DNA_photolyase DNA photolyase pfam00923 5 2 40.0 Transaldolase Transaldolase pfam01204 5 2 40.0 Trehalase Trehalase pfam01209 5 2 40.0 Ubie_methyltran ubiE/COQ5 methyltransferase family pfam01218 5 2 40.0 Coprogen_oxidas Coproporphyrinogen III oxidase pfam01246 5 2 40.0 Ribosomal_L24e Ribosomal protein L24e pfam01250 5 2 40.0 Ribosomal_S6 Ribosomal protein S6 pfam01698 5 2 40.0 FLO_LFY Floricaula / Leafy protein pfam01844 5 2 40.0 HNH HNH endonuclease pfam01963 5 2 40.0 TraB TraB family pfam02167 5 2 40.0 Cytochrom_C1 Cytochrome C1 family pfam02270 5 2 40.0 TFIIF_beta Transcription initiation factor IIF pfam02671 5 2 40.0 PAH Paired amphipathic helix repeat pfam03572 5 2 40.0 Peptidase_S41 Peptidase family S41 pfam03656 5 2 40.0 Pam16 Pam16 pfam03828 5 2 40.0 PAP_assoc Cid1 family poly A polymerase pfam03876 5 2 40.0 SHS2_Rpb7-N SHS2 domain found in N terminus of pfam04133 5 2 40.0 Vps55 Vacuolar protein sorting 55 pfam04137 5 2 40.0 ERO1 Endoplasmic Reticulum Oxidoreductin 1 (ERO1) pfam04410 5 2 40.0 Gar1 Gar1/Naf1 RNA binding region pfam04573 5 2 40.0 SPC22 Signal peptidase subunit pfam04784 5 2 40.0 DUF547 Protein of unknown function pfam04922 5 2 40.0 DIE2_ALG10 DIE2/ALG10 family pfam05109 5 2 40.0 Herpes_BLLF1 Herpes virus major outer envelope pfam05116 5 2 40.0 S6PP Sucrose-6F-phosphate phosphohydrolase pfam05173 5 2 40.0 DapB_C Dihydrodipicolinate reductase pfam06747 5 2 40.0 CHCH CHCH domain pfam06799 5 2 40.0 DUF1230 Protein of unknown function (DUF1230) pfam08242 5 2 40.0 Methyltransf_12 Methyltransferase domain pfam08317 5 2 40.0 Spc7 Spc7 kinetochore protein pfam08375 5 2 40.0 Rpn3_C Proteasome regulatory subunit C-terminal pfam08414 5 2 40.0 NADPH_Ox Respiratory burst NADPH oxidase pfam10153 5 2 40.0 DUF2361 uncharacterized conserved protein (DUF2361) pfam11916 5 2 40.0 Vac14_Fig4_bd Vacuolar protein 14 C-terminal Fig4p pfam11969 5 2 40.0 DcpS_C Scavenger mRNA decapping enzyme C-term binding pfam12295 5 2 40.0 Symplekin_C Symplekin tight junction protein C terminal pfam12483 5 2 40.0 GIDE E3 Ubiquitin ligase pfam12848 5 2 40.0 ABC_tran_Xtn ABC transporter pfam13911 5 2 40.0 AhpC-TSA_2 AhpC/TSA antioxidant enzyme pfam14497 5 2 40.0 GST_C_3 Glutathione S-transferase pfam15663 5 2 40.0 zf-CCCH_3 Zinc-finger containing family pfam16158 5 2 40.0 N_BRCA1_IG Ig-like domain from next to BRCA1 gene pfam00199 5 1 20.0 Catalase Catalase pfam00218 5 1 20.0 IGPS Indole-3-glycerol phosphate synthase pfam00275 5 1 20.0 EPSP_synthase EPSP synthase (3-phosphoshikimate pfam00644 5 1 20.0 PARP Poly(ADP-ribose) polymerase catalytic domain pfam01196 5 1 20.0 Ribosomal_L17 Ribosomal protein L17 pfam01208 5 1 20.0 URO-D Uroporphyrinogen decarboxylase (URO-D) pfam01457 5 1 20.0 Peptidase_M8 Leishmanolysin pfam01597 5 1 20.0 GCV_H Glycine cleavage H-protein pfam01992 5 1 20.0 vATP-synt_AC39 ATP synthase (C/AC39) subunit pfam02431 5 1 20.0 Chalcone Chalcone-flavanone isomerase pfam02441 5 1 20.0 Flavoprotein Flavoprotein pfam02771 5 1 20.0 Acyl-CoA_dh_N Acyl-CoA dehydrogenase pfam02867 5 1 20.0 Ribonuc_red_lgC Ribonucleotide reductase pfam03629 5 1 20.0 DUF303 Domain of unknown function (DUF303) pfam03660 5 1 20.0 PHF5 PHF5-like protein pfam03952 5 1 20.0 Enolase_N Enolase pfam04101 5 1 20.0 Glyco_tran_28_C Glycosyltransferase family 28 pfam04266 5 1 20.0 ASCH ASCH domain pfam04433 5 1 20.0 SWIRM SWIRM domain pfam04438 5 1 20.0 zf-HIT HIT zinc finger pfam05002 5 1 20.0 SGS SGS domain pfam05672 5 1 20.0 MAP7 MAP7 (E-MAP-115) family pfam05978 5 1 20.0 UNC-93 Ion channel regulatory protein UNC-93 pfam06708 5 1 20.0 DUF1195 Protein of unknown function (DUF1195) pfam07019 5 1 20.0 Rab5ip Rab5-interacting protein (Rab5ip) pfam07712 5 1 20.0 SURNod19 Stress up-regulated Nod 19 pfam08378 5 1 20.0 NERD Nuclease-related domain pfam08477 5 1 20.0 Roc Ras of Complex pfam08597 5 1 20.0 eIF3_subunit Translation initiation factor eIF3 pfam08606 5 1 20.0 Prp19 Prp19/Pso4-like pfam08662 5 1 20.0 eIF2A Eukaryotic translation initiation factor eIF2A pfam10369 5 1 20.0 ALS_ss_C Small subunit of acetolactate synthase pfam10601 5 1 20.0 zf-LITAF-like LITAF-like zinc ribbon domain pfam12580 5 1 20.0 TPPII Tripeptidyl peptidase II pfam13631 5 1 20.0 Cytochrom_B_N_2 Cytochrome b(N-terminal)/b6/petB pfam14829 5 1 20.0 GPAT_N Glycerol-3-phosphate acyltransferase pfam16114 5 1 20.0 Citrate_bind ATP citrate lyase citrate-binding pfam16312 5 1 20.0 Oberon_cc Coiled-coil region of Oberon pfam00276 5 0 0.0 Ribosomal_L23 Ribosomal protein L23 pfam00280 5 0 0.0 potato_inhibit Potato inhibitor I family pfam00333 5 0 0.0 Ribosomal_S5 Ribosomal protein S5 pfam00346 5 0 0.0 Complex1_49kDa Respiratory-chain NADH dehydrogenase pfam00954 5 0 0.0 S_locus_glycop S-locus glycoprotein domain pfam01131 5 0 0.0 Topoisom_bac DNA topoisomerase pfam01215 5 0 0.0 COX5B Cytochrome c oxidase subunit Vb pfam01241 5 0 0.0 PSI_PSAK Photosystem I psaG / psaK pfam01419 5 0 0.0 Jacalin Jacalin-like lectin domain pfam01634 5 0 0.0 HisG ATP phosphoribosyltransferase pfam02005 5 0 0.0 TRM N2 pfam02263 5 0 0.0 GBP Guanylate-binding protein pfam02401 5 0 0.0 LYTB LytB protein pfam02770 5 0 0.0 Acyl-CoA_dh_M Acyl-CoA dehydrogenase pfam04012 5 0 0.0 PspA_IM30 PspA/IM30 family pfam04502 5 0 0.0 DUF572 Family of unknown function (DUF572) pfam04560 5 0 0.0 RNA_pol_Rpb2_7 RNA polymerase Rpb2 pfam04758 5 0 0.0 Ribosomal_S30 Ribosomal protein S30 pfam04893 5 0 0.0 Yip1 Yip1 domain pfam05380 5 0 0.0 Peptidase_A17 Pao retrotransposon peptidase pfam05773 5 0 0.0 RWD RWD domain pfam06624 5 0 0.0 RAMP4 Ribosome associated membrane protein RAMP4 pfam07576 5 0 0.0 BRAP2 BRCA1-associated protein 2 pfam08246 5 0 0.0 Inhibitor_I29 Cathepsin propeptide inhibitor domain pfam08311 5 0 0.0 Mad3_BUB1_I Mad3/BUB1 homology region 1 pfam09118 5 0 0.0 DUF1929 Domain of unknown function (DUF1929) pfam10184 5 0 0.0 DUF2358 Uncharacterized conserved protein (DUF2358) pfam10354 5 0 0.0 DUF2431 Domain of unknown function (DUF2431) pfam10431 5 0 0.0 ClpB_D2-small C-terminal pfam12253 5 0 0.0 CAF1A Chromatin assembly factor 1 subunit A pfam13934 5 0 0.0 ELYS Nuclear pore complex assembly pfam14555 5 0 0.0 UBA_4 UBA-like domain pfam14569 5 0 0.0 zf-UDP Zinc-binding RING-finger pfam03997 4 8 200.0 VPS28 VPS28 protein pfam00591 4 7 175.0 Glycos_transf_3 Glycosyl transferase family pfam01464 4 5 125.0 SLT Transglycosylase SLT domain pfam02792 4 5 125.0 Mago_nashi Mago nashi protein pfam07837 4 5 125.0 FTCD_N Formiminotransferase domain pfam09731 4 5 125.0 Mitofilin Mitochondrial inner membrane protein pfam09749 4 5 125.0 HVSL uncharacterized conserved protein pfam10260 4 5 125.0 SAYSvFN Uncharacterized conserved domain (SAYSvFN) pfam16596 4 5 125.0 MFMR_assoc Disordered region downstream of MFMR pfam00303 4 4 100.0 Thymidylat_synt Thymidylate synthase pfam00590 4 4 100.0 TP_methylase Tetrapyrrole (Corrin/Porphyrin) pfam00703 4 4 100.0 Glyco_hydro_2 Glycosyl hydrolases family 2 pfam00806 4 4 100.0 PUF Pumilio-family RNA binding repeat pfam00900 4 4 100.0 Ribosomal_S4e Ribosomal family S4e pfam00988 4 4 100.0 CPSase_sm_chain Carbamoyl-phosphate synthase small pfam01480 4 4 100.0 PWI PWI domain pfam01487 4 4 100.0 DHquinase_I Type I 3-dehydroquinase pfam01937 4 4 100.0 DUF89 Protein of unknown function DUF89 pfam02152 4 4 100.0 FolB Dihydroneopterin aldolase pfam02470 4 4 100.0 MlaD MlaD protein pfam02882 4 4 100.0 THF_DHG_CYH_C Tetrahydrofolate pfam04111 4 4 100.0 APG6 Autophagy protein Apg6 pfam04140 4 4 100.0 ICMT Isoprenylcysteine carboxyl methyltransferase pfam05859 4 4 100.0 Mis12 Mis12 protein pfam07541 4 4 100.0 EIF_2_alpha Eukaryotic translation initiation factor 2 pfam09173 4 4 100.0 eIF2_C Initiation factor eIF2 gamma pfam09340 4 4 100.0 NuA4 Histone acetyltransferase subunit NuA4 pfam12624 4 4 100.0 Chorein_N N-terminal region of Chorein or VPS13 pfam13328 4 4 100.0 HD_4 HD domain pfam13369 4 4 100.0 Transglut_core2 Transglutaminase-like superfamily pfam16880 4 4 100.0 EHD_N N-terminal EH-domain containing protein pfam00136 4 3 75.0 DNA_pol_B DNA polymerase family B pfam00731 4 3 75.0 AIRC AIR carboxylase pfam00750 4 3 75.0 tRNA-synt_1d tRNA synthetases class I (R) pfam00889 4 3 75.0 EF_TS Elongation factor TS pfam01111 4 3 75.0 CKS Cyclin-dependent kinase regulatory subunit pfam01329 4 3 75.0 Pterin_4a Pterin 4 alpha carbinolamine dehydratase pfam01450 4 3 75.0 IlvC Acetohydroxy acid isomeroreductase pfam01491 4 3 75.0 Frataxin_Cyay Frataxin-like domain pfam01588 4 3 75.0 tRNA_bind Putative tRNA binding domain pfam01619 4 3 75.0 Pro_dh Proline dehydrogenase pfam01702 4 3 75.0 TGT Queuine tRNA-ribosyltransferase pfam01866 4 3 75.0 Diphthamide_syn Putative diphthamide synthesis protein pfam02176 4 3 75.0 zf-TRAF TRAF-type zinc finger pfam02320 4 3 75.0 UCR_hinge Ubiquinol-cytochrome C reductase hinge pfam02886 4 3 75.0 LBP_BPI_CETP_C LBP / BPI / CETP family pfam02913 4 3 75.0 FAD-oxidase_C FAD linked oxidases pfam03034 4 3 75.0 PSS Phosphatidyl serine synthase pfam03114 4 3 75.0 BAR BAR domain pfam03366 4 3 75.0 YEATS YEATS family pfam03540 4 3 75.0 TFIID_30kDa Transcription initiation factor TFIID pfam03652 4 3 75.0 RuvX Holliday junction resolvase pfam03661 4 3 75.0 UPF0121 uncharacterized protein family (UPF0121) pfam03694 4 3 75.0 Erg28 Erg28 like protein pfam04437 4 3 75.0 RINT1_TIP1 RINT-1 / TIP-1 family pfam04641 4 3 75.0 Rtf2 Rtf2 RING-finger pfam04695 4 3 75.0 Pex14_N Peroxisomal membrane anchor protein (Pex14p) pfam05096 4 3 75.0 Glu_cyclase_2 Glutamine cyclotransferase pfam06093 4 3 75.0 Spt4 Spt4/RpoE2 zinc finger pfam06172 4 3 75.0 Cupin_5 Cupin superfamily (DUF985) pfam06220 4 3 75.0 zf-U1 U1 zinc finger pfam06522 4 3 75.0 B12D NADH-ubiquinone reductase complex 1 MLRQ pfam06584 4 3 75.0 DIRP DIRP pfam06775 4 3 75.0 Seipin Putative adipose-regulatory protein (Seipin) pfam08498 4 3 75.0 Sterol_MT_C Sterol methyltransferase C-terminal pfam08628 4 3 75.0 Nexin_C Sorting nexin C terminal pfam09416 4 3 75.0 UPF1_Zn_bind RNA helicase (UPF2 interacting domain) pfam09763 4 3 75.0 Sec3_C Exocyst complex component Sec3 pfam09778 4 3 75.0 Guanylate_cyc_2 Guanylylate cyclase pfam11152 4 3 75.0 DUF2930 Protein of unknown function (DUF2930) pfam11711 4 3 75.0 Tim54 Inner membrane protein import complex subunit pfam13023 4 3 75.0 HD_3 HD domain pfam13207 4 3 75.0 AAA_17 AAA domain pfam13325 4 3 75.0 MCRS_N N-terminal region of micro-spherule protein pfam13917 4 3 75.0 zf-CCHC_3 Zinc knuckle pfam14327 4 3 75.0 CSTF2_hinge Hinge domain of cleavage stimulation pfam15071 4 3 75.0 TMEM220 Transmembrane family 220 pfam16189 4 3 75.0 Creatinase_N_2 Creatinase/Prolidase N-terminal domain pfam16575 4 3 75.0 CLP1_P mRNA cleavage and polyadenylation factor CLP1 pfam00042 4 2 50.0 Globin Globin pfam00215 4 2 50.0 OMPdecase Orotidine 5'-phosphate decarboxylase / HUMPS pfam00265 4 2 50.0 TK Thymidine kinase pfam00610 4 2 50.0 DEP Domain found in Dishevelled pfam00627 4 2 50.0 UBA UBA/TS-N domain pfam00631 4 2 50.0 G-gamma GGL domain pfam00838 4 2 50.0 TCTP Translationally controlled tumour protein pfam00926 4 2 50.0 DHBP_synthase 3 pfam01018 4 2 50.0 GTP1_OBG GTP1/OBG pfam01170 4 2 50.0 UPF0020 Putative RNA methylase family UPF0020 pfam01227 4 2 50.0 GTP_cyclohydroI GTP cyclohydrolase I pfam01245 4 2 50.0 Ribosomal_L19 Ribosomal protein L19 pfam01300 4 2 50.0 Sua5_yciO_yrdC Telomere recombination pfam01471 4 2 50.0 PG_binding_1 Putative peptidoglycan binding domain pfam01592 4 2 50.0 NifU_N NifU-like N terminal domain pfam01808 4 2 50.0 AICARFT_IMPCHas AICARFT/IMPCHase bienzyme pfam01916 4 2 50.0 DS Deoxyhypusine synthase pfam02153 4 2 50.0 PDH Prephenate dehydrogenase pfam02390 4 2 50.0 Methyltransf_4 Putative methyltransferase pfam02405 4 2 50.0 MlaE Permease MlaE pfam02628 4 2 50.0 COX15-CtaA Cytochrome oxidase assembly protein pfam02636 4 2 50.0 Methyltransf_28 Putative pfam02825 4 2 50.0 WWE WWE domain pfam03224 4 2 50.0 V-ATPase_H_N V-ATPase subunit H pfam03350 4 2 50.0 UPF0114 Uncharacterized protein family pfam03371 4 2 50.0 PRP38 PRP38 family pfam03690 4 2 50.0 UPF0160 uncharacterized protein family (UPF0160) pfam03914 4 2 50.0 CBF CBF/Mak21 family pfam04065 4 2 50.0 Not3 Not1 N-terminal domain pfam04081 4 2 50.0 DNA_pol_delta_4 DNA polymerase delta pfam04134 4 2 50.0 DUF393 Protein of unknown function pfam04190 4 2 50.0 DUF410 Protein of unknown function (DUF410) pfam04387 4 2 50.0 PTPLA Protein tyrosine phosphatase-like protein pfam04414 4 2 50.0 tRNA_deacylase D-aminoacyl-tRNA deacylase pfam04418 4 2 50.0 DUF543 Domain of unknown function (DUF543) pfam04845 4 2 50.0 PurA PurA ssDNA and RNA-binding protein pfam05023 4 2 50.0 Phytochelatin Phytochelatin synthase pfam05216 4 2 50.0 UNC-50 UNC-50 family pfam05479 4 2 50.0 PsaN Photosystem I reaction centre subunit N (PSAN or pfam05602 4 2 50.0 CLPTM1 Cleft lip and palate transmembrane protein 1 pfam05670 4 2 50.0 DUF814 Domain of unknown function (DUF814) pfam06071 4 2 50.0 YchF-GTPase_C Protein of unknown function (DUF933) pfam06090 4 2 50.0 Ins_P5_2-kin Inositol-pentakisphosphate 2-kinase pfam06201 4 2 50.0 PITH PITH domain pfam06650 4 2 50.0 SHR-BD SHR-binding domain of vacuolar-sorting pfam06858 4 2 50.0 NOG1 Nucleolar GTP-binding protein 1 (NOG1) pfam06941 4 2 50.0 NT5C 5' nucleotidase pfam07063 4 2 50.0 DUF1338 Domain of unknown function (DUF1338) pfam07082 4 2 50.0 DUF1350 Protein of unknown function (DUF1350) pfam07393 4 2 50.0 Sec10 Exocyst complex component Sec10 pfam08161 4 2 50.0 NUC173 NUC173 domain pfam08231 4 2 50.0 SYF2 SYF2 splicing factor pfam08264 4 2 50.0 Anticodon_1 Anticodon-binding domain of tRNA pfam08536 4 2 50.0 Whirly Whirly transcription factor pfam08571 4 2 50.0 Yos1 Yos1-like pfam09328 4 2 50.0 Phytochelatin_C Domain of unknown function (DUF1984) pfam09497 4 2 50.0 Med12 Transcription mediator complex subunit Med12 pfam09728 4 2 50.0 Taxilin Myosin-like coiled-coil protein pfam10183 4 2 50.0 ESSS ESSS subunit of NADH:ubiquinone oxidoreductase pfam10191 4 2 50.0 COG7 Golgi complex component 7 (COG7) pfam10199 4 2 50.0 Adaptin_binding Alpha and gamma adaptin binding protein pfam10213 4 2 50.0 MRP-S28 Mitochondrial ribosomal subunit protein pfam10269 4 2 50.0 Tmemb_185A Transmembrane Fragile-X-F protein pfam11779 4 2 50.0 DUF3317 Protein of unknown function (DUF3317) pfam11947 4 2 50.0 DUF3464 Protein of unknown function (DUF3464) pfam12047 4 2 50.0 DNMT1-RFD Cytosine specific DNA methyltransferase pfam12701 4 2 50.0 LSM14 Scd6-like Sm domain pfam12739 4 2 50.0 TRAPPC-Trs85 ER-Golgi trafficking TRAPP I complex 85 pfam12998 4 2 50.0 ING Inhibitor of growth proteins N-terminal pfam13506 4 2 50.0 Glyco_transf_21 Glycosyl transferase family 21 pfam13714 4 2 50.0 PEP_mutase Phosphoenolpyruvate phosphomutase pfam13779 4 2 50.0 DUF4175 Domain of unknown function (DUF4175) pfam13872 4 2 50.0 AAA_34 P-loop containing NTP hydrolase pore-1 pfam13891 4 2 50.0 zf-C3Hc3H Potential DNA-binding domain pfam14901 4 2 50.0 Jiv90 Cleavage inducing molecular chaperone pfam16045 4 2 50.0 LisH_2 LisH pfam16851 4 2 50.0 Stomagen Stomagen pfam00384 4 1 25.0 Molybdopterin Molybdopterin oxidoreductase pfam00468 4 1 25.0 Ribosomal_L34 Ribosomal protein L34 pfam01016 4 1 25.0 Ribosomal_L27 Ribosomal L27 protein pfam01077 4 1 25.0 NIR_SIR Nitrite and sulphite reductase 4Fe-4S domain pfam01118 4 1 25.0 Semialdhyde_dh Semialdehyde dehydrogenase pfam01124 4 1 25.0 MAPEG MAPEG family pfam01154 4 1 25.0 HMG_CoA_synt_N Hydroxymethylglutaryl-coenzyme A pfam01165 4 1 25.0 Ribosomal_S21 Ribosomal protein S21 pfam01168 4 1 25.0 Ala_racemase_N Alanine racemase pfam01210 4 1 25.0 NAD_Gly3P_dh_N NAD-dependent glycerol-3-phosphate pfam01233 4 1 25.0 NMT Myristoyl-CoA:protein N-myristoyltransferase pfam01268 4 1 25.0 FTHFS Formate--tetrahydrofolate ligase pfam01384 4 1 25.0 PHO4 Phosphate transporter family pfam01794 4 1 25.0 Ferric_reduct Ferric reductase like transmembrane pfam01813 4 1 25.0 ATP-synt_D ATP synthase subunit D pfam01940 4 1 25.0 DUF92 Integral membrane protein DUF92 pfam02195 4 1 25.0 ParBc ParB-like nuclease domain pfam02594 4 1 25.0 DUF167 uncharacterized ACR pfam02605 4 1 25.0 PsaL Photosystem I reaction centre subunit XI pfam02666 4 1 25.0 PS_Dcarbxylase Phosphatidylserine decarboxylase pfam02670 4 1 25.0 DXP_reductoisom 1-deoxy-D-xylulose 5-phosphate pfam02678 4 1 25.0 Pirin Pirin pfam02735 4 1 25.0 Ku Ku70/Ku80 beta-barrel domain pfam02780 4 1 25.0 Transketolase_C Transketolase pfam03060 4 1 25.0 NMO Nitronate monooxygenase pfam03155 4 1 25.0 Alg6_Alg8 ALG6 pfam03223 4 1 25.0 V-ATPase_C V-ATPase subunit C pfam03463 4 1 25.0 eRF1_1 eRF1 domain 1 pfam03531 4 1 25.0 SSrecog Structure-specific recognition protein (SSRP1) pfam03630 4 1 25.0 Fumble Fumble pfam03985 4 1 25.0 Paf1 Paf1 pfam04280 4 1 25.0 Tim44 Tim44-like domain pfam04379 4 1 25.0 DUF525 Protein of unknown function (DUF525) pfam04627 4 1 25.0 ATP-synt_Eps Mitochondrial ATP synthase epsilon pfam04677 4 1 25.0 CwfJ_C_1 Protein similar to CwfJ C-terminus 1 pfam04800 4 1 25.0 ETC_C1_NDUFA4 ETC complex I subunit conserved region pfam05180 4 1 25.0 zf-DNL DNL zinc finger pfam06248 4 1 25.0 Zw10 Centromere/kinetochore Zw10 pfam06421 4 1 25.0 LepA_C GTP-binding protein LepA C-terminus pfam07168 4 1 25.0 Ureide_permease Ureide permease pfam07386 4 1 25.0 DUF1499 Protein of unknown function (DUF1499) pfam07890 4 1 25.0 Rrp15p Rrp15p pfam08212 4 1 25.0 Lipocalin_2 Lipocalin-like domain pfam08312 4 1 25.0 cwf21 cwf21 domain pfam08543 4 1 25.0 Phos_pyr_kin Phosphomethylpyrimidine kinase pfam08545 4 1 25.0 ACP_syn_III 3-Oxoacyl-[acyl-carrier-protein (ACP)] pfam08561 4 1 25.0 Ribosomal_L37 Mitochondrial ribosomal protein L37 pfam08694 4 1 25.0 UFC1 Ubiquitin-fold modifier-conjugating enzyme 1 pfam09459 4 1 25.0 EB_dh Ethylbenzene dehydrogenase pfam09816 4 1 25.0 EAF RNA polymerase II transcription elongation factor pfam10273 4 1 25.0 WGG Pre-rRNA-processing protein TSR2 pfam10406 4 1 25.0 TAF8_C Transcription factor TFIID complex subunit 8 pfam12049 4 1 25.0 DUF3531 Protein of unknown function (DUF3531) pfam12325 4 1 25.0 TMF_TATA_bd TATA element modulatory factor 1 TATA pfam12681 4 1 25.0 Glyoxalase_2 Glyoxalase-like domain pfam13088 4 1 25.0 BNR_2 BNR repeat-like domain pfam13393 4 1 25.0 tRNA-synt_His Histidyl-tRNA synthetase pfam13880 4 1 25.0 Acetyltransf_13 ESCO1/2 acetyl-transferase pfam14580 4 1 25.0 LRR_9 Leucine-rich repeat pfam14853 4 1 25.0 Fis1_TPR_C Fis1 C-terminal tetratricopeptide repeat pfam15704 4 1 25.0 Mt_ATP_synt Mitochondrial ATP synthase subunit pfam16205 4 1 25.0 Ribosomal_S17_N Ribosomal_S17 N-terminal pfam16414 4 1 25.0 NPC1_N Niemann-Pick C1 N terminus pfam00161 4 0 0.0 RIP Ribosome inactivating protein pfam00615 4 0 0.0 RGS Regulator of G protein signaling domain pfam00690 4 0 0.0 Cation_ATPase_N Cation transporter/ATPase pfam00977 4 0 0.0 His_biosynth Histidine biosynthesis protein pfam01039 4 0 0.0 Carboxyl_trans Carboxyl transferase domain pfam01080 4 0 0.0 Presenilin Presenilin pfam01088 4 0 0.0 Peptidase_C12 Ubiquitin carboxyl-terminal hydrolase pfam01120 4 0 0.0 Alpha_L_fucos Alpha-L-fucosidase pfam01127 4 0 0.0 Sdh_cyt Succinate dehydrogenase/Fumarate reductase pfam01409 4 0 0.0 tRNA-synt_2d tRNA synthetases class II core domain (F) pfam01458 4 0 0.0 UPF0051 Uncharacterized protein family (UPF0051) pfam01470 4 0 0.0 Peptidase_C15 Pyroglutamyl peptidase pfam01472 4 0 0.0 PUA PUA domain pfam01488 4 0 0.0 Shikimate_DH Shikimate / quinate 5-dehydrogenase pfam01632 4 0 0.0 Ribosomal_L35p Ribosomal protein L35 pfam01722 4 0 0.0 BolA BolA-like protein pfam01740 4 0 0.0 STAS STAS domain pfam02036 4 0 0.0 SCP2 SCP-2 sterol transfer family pfam02046 4 0 0.0 COX6A Cytochrome c oxidase subunit VIa pfam02204 4 0 0.0 VPS9 Vacuolar sorting protein 9 (VPS9) domain pfam02341 4 0 0.0 RcbX RbcX protein pfam02386 4 0 0.0 TrkH Cation transport protein pfam02416 4 0 0.0 MttA_Hcf106 mttA/Hcf106 family pfam02507 4 0 0.0 PSI_PsaF Photosystem I reaction centre subunit III pfam02531 4 0 0.0 PsaD PsaD pfam02617 4 0 0.0 ClpS ATP-dependent Clp protease adaptor protein ClpS pfam02668 4 0 0.0 TauD Taurine catabolism dioxygenase TauD pfam02769 4 0 0.0 AIRS_C AIR synthase related protein pfam02852 4 0 0.0 Pyr_redox_dim Pyridine nucleotide-disulphide pfam03129 4 0 0.0 HGTP_anticodon Anticodon binding domain pfam03221 4 0 0.0 HTH_Tnp_Tc5 Tc5 transposase DNA-binding domain pfam03803 4 0 0.0 Scramblase Scramblase pfam03870 4 0 0.0 RNA_pol_Rpb8 RNA polymerase Rpb8 pfam03878 4 0 0.0 YIF1 YIF1 pfam03917 4 0 0.0 GSH_synth_ATP Eukaryotic glutathione synthase pfam04072 4 0 0.0 LCM Leucine carboxyl methyltransferase pfam04113 4 0 0.0 Gpi16 Gpi16 subunit pfam04127 4 0 0.0 DFP DNA / pantothenate metabolizm flavoprotein pfam04135 4 0 0.0 Nop10p Nucleolar RNA-binding protein pfam04359 4 0 0.0 DUF493 Protein of unknown function (DUF493) pfam04614 4 0 0.0 Pex19 Pex19 protein family pfam04882 4 0 0.0 Peroxin-3 Peroxin-3 pfam05060 4 0 0.0 MGAT2 N-acetylglucosaminyltransferase II (MGAT2) pfam05184 4 0 0.0 SapB_1 Saposin-like type B pfam05207 4 0 0.0 zf-CSL CSL zinc finger pfam05419 4 0 0.0 GUN4 GUN4-like pfam05659 4 0 0.0 RPW8 Arabidopsis broad-spectrum mildew resistance pfam05676 4 0 0.0 NDUF_B7 NADH-ubiquinone oxidoreductase B18 subunit pfam05684 4 0 0.0 DUF819 Protein of unknown function (DUF819) pfam05742 4 0 0.0 TANGO2 Transport and Golgi organization 2 pfam05793 4 0 0.0 TFIIF_alpha Transcription initiation factor IIF pfam05907 4 0 0.0 DUF866 Eukaryotic protein of unknown function (DUF866) pfam05997 4 0 0.0 Nop52 Nucleolar protein pfam06087 4 0 0.0 Tyr-DNA_phospho Tyrosyl-DNA phosphodiesterase pfam06212 4 0 0.0 GRIM-19 GRIM-19 protein pfam06592 4 0 0.0 DUF1138 Protein of unknown function (DUF1138) pfam06703 4 0 0.0 SPC25 Microsomal signal peptidase 25 kDa subunit pfam07231 4 0 0.0 Hs1pro-1_N Hs1pro-1 N-terminus pfam07298 4 0 0.0 NnrU NnrU protein pfam07748 4 0 0.0 Glyco_hydro_38C Glycosyl hydrolases family 38 pfam08148 4 0 0.0 DSHCT DSHCT (NUC185) domain pfam08244 4 0 0.0 Glyco_hydro_32C Glycosyl hydrolases family 32 C pfam08318 4 0 0.0 COG4 COG4 transport protein pfam08557 4 0 0.0 Lipid_DES Sphingolipid Delta4-desaturase (DES) pfam08572 4 0 0.0 PRP3 pre-mRNA processing factor 3 (PRP3) pfam08787 4 0 0.0 Alginate_lyase2 Alginate lyase pfam09285 4 0 0.0 Elong-fact-P_C Elongation factor P pfam09334 4 0 0.0 tRNA-synt_1g tRNA synthetases class I (M) pfam10255 4 0 0.0 Paf67 RNA polymerase I-associated factor PAF67 pfam10409 4 0 0.0 PTEN_C2 C2 domain of PTEN tumour-suppressor protein pfam10469 4 0 0.0 AKAP7_NLS AKAP7 2'5' RNA ligase-like domain pfam10998 4 0 0.0 DUF2838 Protein of unknown function (DUF2838) pfam11708 4 0 0.0 Slu7 Pre-mRNA splicing Prp18-interacting factor pfam12037 4 0 0.0 DUF3523 Domain of unknown function (DUF3523) pfam12353 4 0 0.0 eIF3g Eukaryotic translation initiation factor 3 pfam12838 4 0 0.0 Fer4_7 4Fe-4S dicluster domain pfam13167 4 0 0.0 GTP-bdg_N GTP-binding GTPase N-terminal pfam13297 4 0 0.0 Telomere_Sde2_2 Telomere stability C-terminal pfam13326 4 0 0.0 PSII_Pbs27 Photosystem II Pbs27 pfam13507 4 0 0.0 GATase_5 CobB/CobQ-like glutamine amidotransferase pfam13668 4 0 0.0 Ferritin_2 Ferritin-like domain pfam13676 4 0 0.0 TIR_2 TIR domain pfam13964 4 0 0.0 Kelch_6 Kelch motif pfam14310 4 0 0.0 Fn3-like Fibronectin type III-like domain pfam14378 4 0 0.0 PAP2_3 PAP2 superfamily pfam14633 4 0 0.0 SH2_2 SH2 domain pfam14693 4 0 0.0 Ribosomal_TL5_C Ribosomal protein TL5 pfam14709 4 0 0.0 DND1_DSRM double strand RNA binding domain from DEAD pfam15003 4 0 0.0 HAUS2 HAUS augmin-like complex subunit 2 pfam15879 4 0 0.0 MWFE NADH-ubiquinone oxidoreductase MWFE subunit pfam16186 4 0 0.0 Arm_3 Atypical Arm repeat pfam16187 4 0 0.0 Peptidase_M16_M Middle or third domain of pfam16213 4 0 0.0 DCB Dimerization and cyclophilin-binding domain of pfam16486 4 0 0.0 ArgoN N-terminal domain of argonaute pfam16679 4 0 0.0 CDT1_C DNA replication factor Cdt1 C-terminal domain pfam09750 3 5 166.7 DRY_EERY Alternative splicing regulator pfam02146 3 4 133.3 SIR2 Sir2 family pfam06991 3 4 133.3 MFAP1 Microfibril-associated/Pre-mRNA processing pfam10475 3 4 133.3 DUF2450 Protein of unknown function N-terminal domain pfam13672 3 4 133.3 PP2C_2 Protein phosphatase 2C pfam14700 3 4 133.3 RPOL_N DNA-directed RNA polymerase N-terminal pfam00476 3 3 100.0 DNA_pol_A DNA polymerase family A pfam02527 3 3 100.0 GidB rRNA small subunit methyltransferase G pfam02630 3 3 100.0 SCO1-SenC SCO1/SenC pfam02733 3 3 100.0 Dak1 Dak1 domain pfam03517 3 3 100.0 Voldacs Regulator of volume decrease after cellular pfam03715 3 3 100.0 Noc2 Noc2p family pfam04048 3 3 100.0 Sec8_exocyst Sec8 exocyst complex component specific pfam04062 3 3 100.0 P21-Arc ARP2/3 complex ARPC3 (21 kDa) subunit pfam04086 3 3 100.0 SRP-alpha_N Signal recognition particle pfam05089 3 3 100.0 NAGLU Alpha-N-acetylglucosaminidase (NAGLU) tim-barrel pfam05172 3 3 100.0 Nup35_RRM Nup53/35/40-type RNA recognition motif pfam08321 3 3 100.0 PPP5 PPP5 TPR repeat region pfam09746 3 3 100.0 Membralin Tumour-associated protein pfam09758 3 3 100.0 FPL uncharacterized conserved protein pfam10559 3 3 100.0 Plug_translocon Plug domain of Sec61p pfam11265 3 3 100.0 Med25_VWA Mediator complex subunit 25 von Willebrand pfam12220 3 3 100.0 U1snRNP70_N U1 small nuclear ribonucleoprotein of 70kDa pfam12717 3 3 100.0 Cnd1 non-SMC mitotic condensation complex subunit 1 pfam14560 3 3 100.0 Ubiquitin_2 Ubiquitin-like domain pfam00397 3 2 66.7 WW WW domain pfam00510 3 2 66.7 COX3 Cytochrome c oxidase subunit III pfam00749 3 2 66.7 tRNA-synt_1c tRNA synthetases class I (E and Q) pfam00793 3 2 66.7 DAHP_synth_1 DAHP synthetase I family pfam00970 3 2 66.7 FAD_binding_6 Oxidoreductase FAD-binding domain pfam01042 3 2 66.7 Ribonuc_L-PSP Endoribonuclease L-PSP pfam01121 3 2 66.7 CoaE Dephospho-CoA kinase pfam01171 3 2 66.7 ATP_bind_3 PP-loop family pfam01192 3 2 66.7 RNA_pol_Rpb6 RNA polymerase Rpb6 pfam01424 3 2 66.7 R3H R3H domain pfam01761 3 2 66.7 DHQ_synthase 3-dehydroquinate synthase pfam01765 3 2 66.7 RRF Ribosome recycling factor pfam01959 3 2 66.7 DHQS 3-dehydroquinate synthase (EC 4 pfam01997 3 2 66.7 Translin Translin family pfam02092 3 2 66.7 tRNA_synt_2f Glycyl-tRNA synthetase beta subunit pfam02475 3 2 66.7 Met_10 Met-10+ like-protein pfam02921 3 2 66.7 UCR_TM Ubiquinol cytochrome reductase transmembrane pfam02941 3 2 66.7 FeThRed_A Ferredoxin thioredoxin reductase variable pfam03178 3 2 66.7 CPSF_A CPSF A subunit region pfam03254 3 2 66.7 XG_FTase Xyloglucan fucosyltransferase pfam03385 3 2 66.7 DUF288 Protein of unknown function pfam03464 3 2 66.7 eRF1_2 eRF1 domain 2 pfam03604 3 2 66.7 DNA_RNApol_7kD DNA directed RNA polymerase pfam03849 3 2 66.7 Tfb2 Transcription factor Tfb2 pfam03918 3 2 66.7 CcmH Cytochrome C biogenesis protein pfam03937 3 2 66.7 Sdh5 Flavinator of succinate dehydrogenase pfam04112 3 2 66.7 Mak10 Mak10 subunit pfam04253 3 2 66.7 TFR_dimer Transferrin receptor-like dimerization pfam04801 3 2 66.7 Sin_N Sin-like protein conserved region pfam04839 3 2 66.7 PSRP-3_Ycf65 Plastid and cyanobacterial ribosomal pfam04871 3 2 66.7 Uso1_p115_C Uso1 / p115 like vesicle tethering protein pfam05251 3 2 66.7 UPF0197 uncharacterized protein family (UPF0197) pfam05277 3 2 66.7 DUF726 Protein of unknown function (DUF726) pfam05347 3 2 66.7 Complex1_LYR Complex 1 protein (LYR family) pfam05450 3 2 66.7 Nicastrin Nicastrin pfam05470 3 2 66.7 eIF-3c_N Eukaryotic translation initiation factor 3 pfam05832 3 2 66.7 DUF846 Eukaryotic protein of unknown function (DUF846) pfam06258 3 2 66.7 Mito_fiss_Elm1 Mitochondrial fission ELM1 pfam07014 3 2 66.7 Hs1pro-1_C Hs1pro-1 protein C-terminus pfam07065 3 2 66.7 D123 D123 pfam07287 3 2 66.7 DUF1446 Protein of unknown function (DUF1446) pfam07915 3 2 66.7 PRKCSH Glucosidase II beta subunit-like protein pfam07977 3 2 66.7 FabA FabA-like domain pfam08167 3 2 66.7 RIX1 rRNA processing/ribosome biogenesis pfam08217 3 2 66.7 DUF1712 Fungal domain of unknown function (DUF1712) pfam08234 3 2 66.7 Spindle_Spc25 Chromosome segregation protein Spc25 pfam08626 3 2 66.7 TRAPPC9-Trs120 Transport protein Trs120 or TRAPPC9 pfam08767 3 2 66.7 CRM1_C CRM1 C terminal pfam09133 3 2 66.7 SANTA SANTA (SANT Associated) pfam09187 3 2 66.7 DUF1950 Domain of unknown function(DUF1950) pfam09279 3 2 66.7 EF-hand_like Phosphoinositide-specific phospholipase pfam09507 3 2 66.7 CDC27 DNA polymerase subunit Cdc27 pfam09759 3 2 66.7 Atx10homo_assoc Spinocerebellar ataxia type 10 protein pfam10058 3 2 66.7 zinc_ribbon_10 Predicted integral membrane zinc-ribbon pfam10440 3 2 66.7 WIYLD Ubiquitin-binding WIYLD domain pfam10447 3 2 66.7 EXOSC1 Exosome component EXOSC1/CSL4 pfam10509 3 2 66.7 GalKase_gal_bdg Galactokinase galactose-binding pfam11016 3 2 66.7 DUF2854 Protein of unknown function (DUF2854) pfam11460 3 2 66.7 DUF3007 Protein of unknown function (DUF3007) pfam11705 3 2 66.7 RNA_pol_3_Rpc31 DNA-directed RNA polymerase III pfam11852 3 2 66.7 DUF3372 Domain of unknown function (DUF3372) pfam11998 3 2 66.7 DUF3493 Protein of unknown function (DUF3493) pfam12507 3 2 66.7 HCMV_UL139 Human Cytomegalovirus UL139 protein pfam12554 3 2 66.7 MOZART1 Mitotic-spindle organizing gamma-tubulin ring pfam12756 3 2 66.7 zf-C2H2_2 C2H2 type zinc-finger (2 copies) pfam12763 3 2 66.7 EF-hand_4 Cytoskeletal-regulatory complex EF hand pfam13343 3 2 66.7 SBP_bac_6 Bacterial extracellular solute-binding pfam13515 3 2 66.7 FUSC_2 Fusaric acid resistance protein-like pfam13862 3 2 66.7 BCIP p21-C-terminal region-binding protein pfam14228 3 2 66.7 MOR2-PAG1_mid Cell morphogenesis central region pfam14249 3 2 66.7 Tocopherol_cycl Tocopherol cyclase pfam14364 3 2 66.7 DUF4408 Domain of unknown function (DUF4408) pfam14438 3 2 66.7 SM-ATX Ataxin 2 SM domain pfam14572 3 2 66.7 Pribosyl_synth Phosphoribosyl synthetase-associated pfam14764 3 2 66.7 SPG48 AP-5 complex subunit pfam14932 3 2 66.7 HAUS-augmin3 HAUS augmin-like complex subunit 3 pfam16036 3 2 66.7 Chalcone_3 Chalcone isomerase-like pfam16076 3 2 66.7 Acyltransf_C Acyltransferase C-terminus pfam00301 3 1 33.3 Rubredoxin Rubredoxin pfam00370 3 1 33.3 FGGY_N FGGY family of carbohydrate kinases pfam00453 3 1 33.3 Ribosomal_L20 Ribosomal protein L20 pfam00708 3 1 33.3 Acylphosphatase Acylphosphatase pfam00752 3 1 33.3 XPG_N XPG N-terminal domain pfam00814 3 1 33.3 Peptidase_M22 Glycoprotease family pfam00885 3 1 33.3 DMRL_synthase 6 pfam01133 3 1 33.3 ER Enhancer of rudimentary pfam01222 3 1 33.3 ERG4_ERG24 Ergosterol biosynthesis ERG4/ERG24 family pfam01379 3 1 33.3 Porphobil_deam Porphobilinogen deaminase pfam01502 3 1 33.3 PRA-CH Phosphoribosyl-AMP cyclohydrolase pfam01512 3 1 33.3 Complex1_51K Respiratory-chain NADH dehydrogenase 51 Kd pfam01591 3 1 33.3 6PF2K 6-phosphofructo-2-kinase pfam01636 3 1 33.3 APH Phosphotransferase enzyme family pfam01974 3 1 33.3 tRNA_int_endo tRNA intron endonuclease pfam01991 3 1 33.3 vATP-synt_E ATP synthase (E/31 kDa) subunit pfam02109 3 1 33.3 DAD DAD family pfam02271 3 1 33.3 UCR_14kD Ubiquinol-cytochrome C reductase complex pfam02548 3 1 33.3 Pantoate_transf Ketopantoate hydroxymethyltransferase pfam02765 3 1 33.3 POT1 Telomeric single stranded DNA binding POT1/CDC13 pfam02815 3 1 33.3 MIR MIR domain pfam03095 3 1 33.3 PTPA Phosphotyrosyl phosphate activator (PTPA) protein pfam03137 3 1 33.3 OATP Organic Anion Transporter Polypeptide (OATP) pfam03190 3 1 33.3 Thioredox_DsbH Protein of unknown function pfam03800 3 1 33.3 Nuf2 Nuf2 family pfam03801 3 1 33.3 Ndc80_HEC HEC/Ndc80p family pfam03950 3 1 33.3 tRNA-synt_1c_C tRNA synthetases class I (E and Q) pfam03969 3 1 33.3 AFG1_ATPase AFG1-like ATPase pfam03986 3 1 33.3 Autophagy_N Autophagocytosis associated protein (Atg3) pfam03998 3 1 33.3 Utp11 Utp11 protein pfam04000 3 1 33.3 Sas10_Utp3 Sas10/Utp3/C1D family pfam04124 3 1 33.3 Dor1 Dor1-like family pfam04263 3 1 33.3 TPK_catalytic Thiamin pyrophosphokinase pfam04934 3 1 33.3 Med6 MED6 mediator sub complex component pfam04939 3 1 33.3 RRS1 Ribosome biogenesis regulatory protein (RRS1) pfam05022 3 1 33.3 SRP40_C SRP40 pfam05093 3 1 33.3 CIAPIN1 Cytokine-induced anti-apoptosis inhibitor 1 pfam05746 3 1 33.3 DALR_1 DALR anticodon binding domain pfam05843 3 1 33.3 Suf Suppressor of forked protein (Suf) pfam05971 3 1 33.3 Methyltransf_10 Protein of unknown function (DUF890) pfam06017 3 1 33.3 Myosin_TH1 Unconventional myosin tail pfam06246 3 1 33.3 Isy1 Isy1-like splicing family pfam06427 3 1 33.3 UDP-g_GGTase UDP-glucose:Glycoprotein pfam06880 3 1 33.3 DUF1262 Protein of unknown function (DUF1262) pfam07000 3 1 33.3 DUF1308 Protein of unknown function (DUF1308) pfam07047 3 1 33.3 OPA3 Optic atrophy 3 protein (OPA3) pfam07910 3 1 33.3 Peptidase_C78 Peptidase family C78 pfam07944 3 1 33.3 Glyco_hydro_127 Beta-L-arabinofuranosidase pfam08079 3 1 33.3 Ribosomal_L30_N Ribosomal L30 N-terminal domain pfam08186 3 1 33.3 Wound_ind Wound-inducible basic protein family pfam08326 3 1 33.3 ACC_central Acetyl-CoA carboxylase pfam08373 3 1 33.3 RAP RAP domain pfam08610 3 1 33.3 Pex16 Peroxisomal membrane protein (Pex16) pfam09282 3 1 33.3 Mago-bind Mago binding pfam09439 3 1 33.3 SRPRB Signal recognition particle receptor beta pfam09735 3 1 33.3 Nckap1 Membrane-associated apoptosis protein pfam09740 3 1 33.3 DUF2043 Uncharacterized conserved protein (DUF2043) pfam09767 3 1 33.3 DUF2053 Predicted membrane protein (DUF2053) pfam09787 3 1 33.3 Golgin_A5 Golgin subfamily A member 5 pfam10151 3 1 33.3 DUF2359 uncharacterized conserved protein (DUF2359) pfam10155 3 1 33.3 DUF2363 Uncharacterized conserved protein (DUF2363) pfam10173 3 1 33.3 Mit_KHE1 Mitochondrial K+-H+ exchange-related pfam10247 3 1 33.3 Romo1 Reactive mitochondrial oxygen species modulator pfam10276 3 1 33.3 zf-CHCC Zinc-finger domain pfam11221 3 1 33.3 Med21 Subunit 21 of Mediator complex pfam12263 3 1 33.3 DUF3611 Protein of unknown function (DUF3611) pfam12752 3 1 33.3 SUZ SUZ domain pfam13234 3 1 33.3 rRNA_proc-arch rRNA-processing arch domain pfam13906 3 1 33.3 AA_permease_C C-terminus of AA_permease pfam15159 3 1 33.3 PIG-Y Phosphatidylinositol pfam15985 3 1 33.3 KH_6 KH domain pfam16399 3 1 33.3 Aquarius_N Intron-binding protein aquarius N-terminus pfam17047 3 1 33.3 SMP_LBD Synaptotagmin-like mitochondrial-lipid-binding pfam17048 3 1 33.3 Ceramidse_alk_C Neutral/alkaline non-lysosomal pfam00015 3 0 0.0 MCPsignal Methyl-accepting chemotaxis protein (MCP) pfam00115 3 0 0.0 COX1 Cytochrome C and Quinol oxidase polypeptide I pfam00205 3 0 0.0 TPP_enzyme_M Thiamine pyrophosphate enzyme pfam00258 3 0 0.0 Flavodoxin_1 Flavodoxin pfam00264 3 0 0.0 Tyrosinase Common central domain of tyrosinase pfam00278 3 0 0.0 Orn_DAP_Arg_deC Pyridoxal-dependent decarboxylase pfam00283 3 0 0.0 Cytochrom_B559 Cytochrome b559 pfam00349 3 0 0.0 Hexokinase_1 Hexokinase pfam00479 3 0 0.0 G6PD_N Glucose-6-phosphate dehydrogenase pfam00626 3 0 0.0 Gelsolin Gelsolin repeat pfam00645 3 0 0.0 zf-PARP Poly(ADP-ribose) polymerase and DNA-Ligase pfam00652 3 0 0.0 Ricin_B_lectin Ricin-type beta-trefoil lectin domain pfam00701 3 0 0.0 DHDPS Dihydrodipicolinate synthetase family pfam00725 3 0 0.0 3HCDH 3-hydroxyacyl-CoA dehydrogenase pfam00925 3 0 0.0 GTP_cyclohydro2 GTP cyclohydrolase II pfam01152 3 0 0.0 Bac_globin Bacterial-like globin pfam01194 3 0 0.0 RNA_pol_N RNA polymerases N / 8 kDa subunit pfam01238 3 0 0.0 PMI_typeI Phosphomannose isomerase type I pfam01267 3 0 0.0 F-actin_cap_A F-actin capping protein alpha subunit pfam01869 3 0 0.0 BcrAD_BadFG BadF/BadG/BcrA/BcrD ATPase family pfam01875 3 0 0.0 Memo Memo-like protein pfam01900 3 0 0.0 RNase_P_Rpp14 Rpp14/Pop5 family pfam02114 3 0 0.0 Phosducin Phosducin pfam02121 3 0 0.0 IP_trans Phosphatidylinositol transfer protein pfam02133 3 0 0.0 Transp_cyt_pur Permease for cytosine/purines pfam02148 3 0 0.0 zf-UBP Zn-finger in ubiquitin-hydrolases and other pfam02260 3 0 0.0 FATC FATC domain pfam02269 3 0 0.0 TFIID-18kDa Transcription initiation factor IID pfam02410 3 0 0.0 RsfS Ribosomal silencing factor during starvation pfam02514 3 0 0.0 CobN-Mg_chel CobN/Magnesium Chelatase pfam02542 3 0 0.0 YgbB YgbB family pfam02551 3 0 0.0 Acyl_CoA_thio Acyl-CoA thioesterase pfam02575 3 0 0.0 YbaB_DNA_bd YbaB/EbfC DNA-binding family pfam02728 3 0 0.0 Cu_amine_oxidN3 Copper amine oxidase pfam02840 3 0 0.0 Prp18 Prp18 domain pfam02915 3 0 0.0 Rubrerythrin Rubrerythrin pfam02943 3 0 0.0 FeThRed_B Ferredoxin thioredoxin reductase catalytic pfam03079 3 0 0.0 ARD ARD/ARD' family pfam03104 3 0 0.0 DNA_pol_B_exo1 DNA polymerase family B pfam03345 3 0 0.0 DDOST_48kD Oligosaccharyltransferase 48 kDa subunit pfam03466 3 0 0.0 LysR_substrate LysR substrate binding domain pfam03587 3 0 0.0 EMG1 EMG1/NEP1 methyltransferase pfam03671 3 0 0.0 Ufm1 Ubiquitin fold modifier 1 protein pfam03692 3 0 0.0 CxxCxxCC Putative zinc- or iron-chelating domain pfam03731 3 0 0.0 Ku_N Ku70/Ku80 N-terminal alpha/beta domain pfam03764 3 0 0.0 EFG_IV Elongation factor G pfam03881 3 0 0.0 Fructosamin_kin Fructosamine kinase pfam04152 3 0 0.0 Mre11_DNA_bind Mre11 DNA-binding presumed domain pfam04188 3 0 0.0 Mannosyl_trans2 Mannosyltransferase (PIG-V) pfam04305 3 0 0.0 DUF455 Protein of unknown function (DUF455) pfam04406 3 0 0.0 TP6A_N Type IIB DNA topoisomerase pfam04615 3 0 0.0 Utp14 Utp14 protein pfam04702 3 0 0.0 Vicilin_N Vicilin N terminal region pfam04981 3 0 0.0 NMD3 NMD3 family pfam05021 3 0 0.0 NPL4 NPL4 family pfam05028 3 0 0.0 PARG_cat Poly (ADP-ribose) glycohydrolase (PARG) pfam05051 3 0 0.0 COX17 Cytochrome C oxidase copper chaperone (COX17) pfam05185 3 0 0.0 PRMT5 PRMT5 arginine-N-methyltransferase pfam05919 3 0 0.0 Mitovir_RNA_pol Mitovirus RNA-dependent RNA polymerase pfam06155 3 0 0.0 DUF971 Protein of unknown function (DUF971) pfam06206 3 0 0.0 CpeT CpeT/CpcT family (DUF1001) pfam06244 3 0 0.0 DUF1014 Protein of unknown function (DUF1014) pfam06417 3 0 0.0 DUF1077 Protein of unknown function (DUF1077) pfam06449 3 0 0.0 DUF1082 Mitochondrial domain of unknown function pfam06645 3 0 0.0 SPC12 Microsomal signal peptidase 12 kDa subunit pfam06732 3 0 0.0 Pescadillo_N Pescadillo N-terminus pfam06792 3 0 0.0 UPF0261 uncharacterized protein family (UPF0261) pfam07039 3 0 0.0 DUF1325 SGF29 tudor-like domain pfam07207 3 0 0.0 Lir1 Light regulated protein Lir1 pfam07517 3 0 0.0 SecA_DEAD SecA DEAD-like domain pfam07572 3 0 0.0 BCNT Bucentaur or craniofacial development pfam07802 3 0 0.0 GCK GCK domain pfam07969 3 0 0.0 Amidohydro_3 Amidohydrolase family pfam08007 3 0 0.0 Cupin_4 Cupin superfamily protein pfam08033 3 0 0.0 Sec23_BS Sec23/Sec24 beta-sandwich domain pfam08154 3 0 0.0 NLE NLE (NUC135) domain pfam08159 3 0 0.0 NUC153 NUC153 domain pfam08172 3 0 0.0 CASP_C CASP C terminal pfam08265 3 0 0.0 YL1_C YL1 nuclear protein C-terminal domain pfam08547 3 0 0.0 CIA30 Complex I intermediate-associated protein 30 pfam08609 3 0 0.0 Fes1 Nucleotide exchange factor Fes1 pfam08801 3 0 0.0 Nucleoporin_N Nup133 N terminal like pfam08802 3 0 0.0 CytB6-F_Fe-S Cytochrome B6-F complex Fe-S subunit pfam09478 3 0 0.0 CBM49 Carbohydrate binding domain CBM49 pfam09743 3 0 0.0 DUF2042 Uncharacterized conserved protein (DUF2042) pfam09745 3 0 0.0 DUF2040 Coiled-coil domain-containing protein 55 pfam09747 3 0 0.0 DUF2052 Coiled-coil domain containing protein pfam10167 3 0 0.0 NEP uncharacterized conserved protein pfam10186 3 0 0.0 Atg14 Vacuolar sorting 38 and autophagy-related subunit pfam10474 3 0 0.0 DUF2451 Protein of unknown function C-terminus pfam10615 3 0 0.0 DUF2470 Protein of unknown function (DUF2470) pfam10890 3 0 0.0 DUF2741 Protein of unknown function (DUF2741) pfam10961 3 0 0.0 DUF2763 Protein of unknown function (DUF2763) pfam11210 3 0 0.0 DUF2996 Protein of unknown function (DUF2996) pfam11282 3 0 0.0 DUF3082 Protein of unknown function (DUF3082) pfam11326 3 0 0.0 DUF3128 Protein of unknown function (DUF3128) pfam11443 3 0 0.0 DUF2828 Domain of unknown function (DUF2828) pfam11815 3 0 0.0 DUF3336 Domain of unknown function (DUF3336) pfam11817 3 0 0.0 Foie-gras_1 Foie gras liver health family 1 pfam11940 3 0 0.0 DUF3458 Domain of unknown function (DUF3458) pfam11961 3 0 0.0 DUF3475 Domain of unknown function (DUF3475) pfam12251 3 0 0.0 zf-SNAP50_C snRNA-activating protein of 50kDa MW C pfam12689 3 0 0.0 Acid_PPase Acid Phosphatase pfam12740 3 0 0.0 Chlorophyllase2 Chlorophyllase enzyme pfam12862 3 0 0.0 ANAPC5 Anaphase-promoting complex subunit 5 pfam13014 3 0 0.0 KH_3 KH domain pfam13233 3 0 0.0 Complex1_LYR_2 Complex1_LYR-like pfam13238 3 0 0.0 AAA_18 AAA domain pfam13301 3 0 0.0 DUF4079 Protein of unknown function (DUF4079) pfam13355 3 0 0.0 DUF4101 Protein of unknown function (DUF4101) pfam13578 3 0 0.0 Methyltransf_24 Methyltransferase domain pfam13662 3 0 0.0 Toprim_4 Toprim domain pfam13967 3 0 0.0 RSN1_TM Late exocytosis pfam14498 3 0 0.0 Glyco_hyd_65N_2 Glycosyl hydrolase family 65 pfam14533 3 0 0.0 USP7_C2 Ubiquitin-specific protease C-terminal pfam14630 3 0 0.0 ORC5_C Origin recognition complex (ORC) subunit 5 pfam14714 3 0 0.0 KH_dom-like KH-domain-like of EngA bacterial GTPase pfam15370 3 0 0.0 DUF4598 Domain of unknown function (DUF4598) pfam16269 3 0 0.0 DUF4922 Domain of unknown function (DUF4922) pfam16327 3 0 0.0 CcmF_C Cytochrome c-type biogenesis protein CcmF pfam16543 3 0 0.0 DFRP_C DRG Family Regulatory Proteins pfam16712 3 0 0.0 SCAB_CC Coiled-coil regions of plant-specific pfam16891 3 0 0.0 STPPase_N Serine-threonine protein phosphatase pfam16974 3 0 0.0 NAR2 High-affinity nitrate transporter accessory pfam08288 2 7 350.0 PIGA PIGA (GPI anchor biosynthesis) pfam05724 2 6 300.0 TPMT Thiopurine S-methyltransferase (TPMT) pfam00490 2 4 200.0 ALAD Delta-aminolevulinic acid dehydratase pfam01084 2 4 200.0 Ribosomal_S18 Ribosomal protein S18 pfam04716 2 4 200.0 ETC_C1_NDUFA5 ETC complex I subunit conserved region pfam05625 2 4 200.0 PAXNEB PAXNEB protein pfam09139 2 4 200.0 Mmp37 Mitochondrial matrix Mmp37 pfam11262 2 4 200.0 Tho2 Transcription factor/nuclear export subunit protein pfam16093 2 4 200.0 PAC4 Proteasome assembly chaperone 4 pfam00686 2 3 150.0 CBM_20 Starch binding domain pfam01071 2 3 150.0 GARS_A Phosphoribosylglycinamide synthetase pfam04095 2 3 150.0 NAPRTase Nicotinate phosphoribosyltransferase pfam04982 2 3 150.0 HPP HPP family pfam05236 2 3 150.0 TAF4 Transcription initiation factor TFIID component pfam05327 2 3 150.0 RRN3 RNA polymerase I specific transcription initiation pfam05700 2 3 150.0 BCAS2 Breast carcinoma amplified sequence 2 (BCAS2) pfam07343 2 3 150.0 DUF1475 Protein of unknown function (DUF1475) pfam07823 2 3 150.0 CPDase Cyclic phosphodiesterase-like protein pfam08292 2 3 150.0 RNA_pol_Rbc25 RNA polymerase III subunit Rpc25 pfam09341 2 3 150.0 Pcc1 Transcription factor Pcc1 pfam09425 2 3 150.0 CCT_2 Divergent CCT motif pfam09724 2 3 150.0 DUF2036 Uncharacterized conserved protein (DUF2036) pfam10217 2 3 150.0 DUF2039 Uncharacterized conserved protein (DUF2039) pfam10441 2 3 150.0 Urb2 Urb2/Npa2 family pfam10785 2 3 150.0 NADH-u_ox-rdase NADH-ubiquinone oxidoreductase pfam12200 2 3 150.0 DUF3597 Domain of unknown function (DUF3597) pfam12368 2 3 150.0 Rhodanese_C Rhodanase C-terminal pfam00031 2 2 100.0 Cystatin Cystatin domain pfam00102 2 2 100.0 Y_phosphatase Protein-tyrosine phosphatase pfam00144 2 2 100.0 Beta-lactamase Beta-lactamase pfam00408 2 2 100.0 PGM_PMM_IV Phosphoglucomutase/phosphomannomutase pfam00449 2 2 100.0 Urease_alpha Urease alpha-subunit pfam00491 2 2 100.0 Arginase Arginase family pfam00647 2 2 100.0 EF1G Elongation factor 1 gamma pfam00648 2 2 100.0 Peptidase_C2 Calpain family cysteine protease pfam00697 2 2 100.0 PRAI N-(5'phosphoribosyl)anthranilate (PRA) isomerase pfam00786 2 2 100.0 PBD P21-Rho-binding domain pfam00815 2 2 100.0 Histidinol_dh Histidinol dehydrogenase pfam00919 2 2 100.0 UPF0004 Uncharacterized protein family UPF0004 pfam00930 2 2 100.0 DPPIV_N Dipeptidyl peptidase IV (DPP IV) N-terminal pfam00958 2 2 100.0 GMP_synt_C GMP synthase C terminal domain pfam01062 2 2 100.0 Bestrophin Bestrophin pfam01119 2 2 100.0 DNA_mis_repair DNA mismatch repair protein pfam01256 2 2 100.0 Carb_kinase Carbohydrate kinase pfam01276 2 2 100.0 OKR_DC_1 Orn/Lys/Arg decarboxylase pfam01302 2 2 100.0 CAP_GLY CAP-Gly domain pfam01454 2 2 100.0 MAGE MAGE family pfam01509 2 2 100.0 TruB_N TruB family pseudouridylate synthase (N terminal pfam01687 2 2 100.0 Flavokinase Riboflavin kinase pfam01716 2 2 100.0 MSP Manganese-stabilizing protein / photosystem II pfam01751 2 2 100.0 Toprim Toprim domain pfam01774 2 2 100.0 UreD UreD urease accessory protein pfam01782 2 2 100.0 RimM RimM N-terminal domain pfam01795 2 2 100.0 Methyltransf_5 MraW methylase family pfam01814 2 2 100.0 Hemerythrin Hemerythrin HHE cation binding domain pfam01902 2 2 100.0 Diphthami_syn_2 Diphthamide synthase pfam01933 2 2 100.0 UPF0052 uncharacterized protein family UPF0052 pfam01966 2 2 100.0 HD HD domain pfam01967 2 2 100.0 MoaC MoaC family pfam02144 2 2 100.0 Rad1 Repair protein Rad1/Rec1/Rad17 pfam02290 2 2 100.0 SRP14 Signal recognition particle 14kD protein pfam02357 2 2 100.0 NusG Transcription termination factor nusG pfam02446 2 2 100.0 Glyco_hydro_77 4-alpha-glucanotransferase pfam02576 2 2 100.0 DUF150 Putative ribosome maturation factor RimP pfam02602 2 2 100.0 HEM4 Uroporphyrinogen-III synthase HemD pfam02606 2 2 100.0 LpxK Tetraacyldisaccharide-1-P 4'-kinase pfam02696 2 2 100.0 UPF0061 Uncharacterized ACR pfam02739 2 2 100.0 5_3_exonuc_N 5'-3' exonuclease pfam02751 2 2 100.0 TFIIA_gamma_C Transcription initiation factor IIA pfam02845 2 2 100.0 CUE CUE domain pfam02919 2 2 100.0 Topoisom_I_N Eukaryotic DNA topoisomerase I pfam03024 2 2 100.0 Folate_rec Folate receptor family pfam03271 2 2 100.0 EB1 EB1-like C-terminal motif pfam03416 2 2 100.0 Peptidase_C54 Peptidase family C54 pfam03484 2 2 100.0 B5 tRNA synthetase B5 domain pfam03813 2 2 100.0 Nrap Nrap protein pfam04063 2 2 100.0 DUF383 Domain of unknown function (DUF383) pfam04097 2 2 100.0 Nic96 Nup93/Nic96 pfam04100 2 2 100.0 Vps53_N Vps53-like pfam04106 2 2 100.0 APG5 Autophagy protein Apg5 pfam04161 2 2 100.0 Arv1 Arv1-like family pfam04179 2 2 100.0 Init_tRNA_PT Initiator tRNA phosphoribosyl transferase pfam04182 2 2 100.0 B-block_TFIIIC B-block binding subunit of TFIIIC pfam04357 2 2 100.0 DUF490 Family of unknown function (DUF490) pfam04413 2 2 100.0 Glycos_transf_N 3-Deoxy-D-manno-octulosonic-acid pfam04430 2 2 100.0 DUF498 Protein of unknown function (DUF498/DUF598) pfam04432 2 2 100.0 FrhB_FdhB_C Coenzyme F420 hydrogenase/dehydrogenase pfam04493 2 2 100.0 Endonuclease_5 Endonuclease V pfam04506 2 2 100.0 Rft-1 Rft protein pfam04603 2 2 100.0 Mog1 Ran-interacting Mog1 protein pfam04719 2 2 100.0 TAFII28 hTAFII28-like protein conserved region pfam04751 2 2 100.0 DUF615 Protein of unknown function (DUF615) pfam05282 2 2 100.0 AAR2 AAR2 protein pfam05726 2 2 100.0 Pirin_C Pirin C-terminal cupin domain pfam05786 2 2 100.0 Cnd2 Condensin complex subunit 2 pfam05891 2 2 100.0 Methyltransf_PK AdoMet dependent proline pfam05918 2 2 100.0 API5 Apoptosis inhibitory protein 5 (API5) pfam05991 2 2 100.0 NYN_YacP YacP-like NYN domain pfam05996 2 2 100.0 Fe_bilin_red Ferredoxin-dependent bilin reductase pfam06025 2 2 100.0 DUF913 Domain of Unknown Function (DUF913) pfam06102 2 2 100.0 DUF947 Domain of unknown function (DUF947) pfam06298 2 2 100.0 PsbY Photosystem II protein Y (PsbY) pfam06331 2 2 100.0 Tfb5 Transcription factor TFIIH complex subunit Tfb5 pfam06391 2 2 100.0 MAT1 CDK-activating kinase assembly factor MAT1 pfam06423 2 2 100.0 GWT1 GWT1 pfam06485 2 2 100.0 DUF1092 Protein of unknown function (DUF1092) pfam06842 2 2 100.0 DUF1242 Protein of unknown function (DUF1242) pfam06920 2 2 100.0 DHR-2 Dock homology region 2 pfam06925 2 2 100.0 MGDG_synth Monogalactosyldiacylglycerol (MGDG) pfam06962 2 2 100.0 rRNA_methylase Putative rRNA methylase pfam06964 2 2 100.0 Alpha-L-AF_C Alpha-L-arabinofuranosidase C-terminus pfam07034 2 2 100.0 ORC3_N Origin recognition complex (ORC) subunit 3 pfam07137 2 2 100.0 VDE VDE lipocalin domain pfam07156 2 2 100.0 Prenylcys_lyase Prenylcysteine lyase pfam07478 2 2 100.0 Dala_Dala_lig_C D-ala D-ala ligase C-terminus pfam07814 2 2 100.0 WAPL Wings apart-like protein regulation of pfam07818 2 2 100.0 HCNGP HCNGP-like protein pfam07855 2 2 100.0 DUF1649 Protein of unknown function (DUF1649) pfam08038 2 2 100.0 Tom7 TOM7 family pfam08045 2 2 100.0 CDC14 Cell division control protein 14 pfam08122 2 2 100.0 NDUF_B12 NADH-ubiquinone oxidoreductase B12 subunit pfam08145 2 2 100.0 BOP1NT BOP1NT (NUC169) domain pfam08146 2 2 100.0 BP28CT BP28CT (NUC211) domain pfam08153 2 2 100.0 NGP1NT NGP1NT (NUC091) domain pfam08170 2 2 100.0 POPLD POPLD (NUC188) domain pfam08216 2 2 100.0 CTNNBL Catenin-beta-like pfam08243 2 2 100.0 SPT2 SPT2 chromatin protein pfam08282 2 2 100.0 Hydrolase_3 haloacid dehalogenase-like hydrolase pfam08314 2 2 100.0 Sec39 Secretory pathway protein Sec39 pfam08320 2 2 100.0 PIG-X PIG-X / PBN1 pfam08328 2 2 100.0 ASL_C Adenylosuccinate lyase C-terminal pfam08424 2 2 100.0 NRDE-2 NRDE-2 pfam08555 2 2 100.0 DUF1754 Eukaryotic family of unknown function pfam08585 2 2 100.0 RMI1_N RecQ mediated genome instability protein pfam08616 2 2 100.0 SPA Stabilization of polarity axis pfam08638 2 2 100.0 Med14 Mediator complex subunit MED14 pfam08642 2 2 100.0 Rxt3 Histone deacetylation protein Rxt3 pfam08652 2 2 100.0 RAI1 RAI1 like PD-(D/E)XK nuclease pfam08768 2 2 100.0 DUF1794 Domain of unknown function (DUF1794) pfam08774 2 2 100.0 VRR_NUC VRR-NUC domain pfam09103 2 2 100.0 BRCA-2_OB1 BRCA2 pfam09192 2 2 100.0 Act-Frag_cataly Actin-fragmin kinase pfam09333 2 2 100.0 ATG_C Autophagy-related protein C terminal domain pfam09736 2 2 100.0 Bud13 Pre-mRNA-splicing factor of RES complex pfam09739 2 2 100.0 MCM_bind Mini-chromosome maintenance replisome factor pfam09742 2 2 100.0 Dymeclin Dyggve-Melchior-Clausen syndrome protein pfam09764 2 2 100.0 Nt_Gln_amidase N-terminal glutamine amidase pfam09768 2 2 100.0 Peptidase_M76 Peptidase M76 family pfam09783 2 2 100.0 Vac_ImportDeg Vacuolar import and degradation protein pfam10046 2 2 100.0 BLOC1_2 Biogenesis of lysosome-related organelles pfam10150 2 2 100.0 RNase_E_G Ribonuclease E/G family pfam10350 2 2 100.0 DUF2428 Putative death-receptor fusion protein pfam10392 2 2 100.0 COG5 Golgi transport complex subunit 5 pfam10487 2 2 100.0 Nup188 Nucleoporin subcomplex protein binding to Pom34 pfam10510 2 2 100.0 PIG-S Phosphatidylinositol-glycan biosynthesis class S pfam11107 2 2 100.0 FANCF Fanconi anemia group F protein (FANCF) pfam11204 2 2 100.0 DUF2985 Protein of unknown function (DUF2985) pfam11267 2 2 100.0 DUF3067 Domain of unknown function (DUF3067) pfam11559 2 2 100.0 ADIP Afadin- and alpha -actinin-Binding pfam11595 2 2 100.0 DUF3245 Protein of unknown function (DUF3245) pfam11715 2 2 100.0 Nup160 Nucleoporin Nup120/160 pfam11788 2 2 100.0 MRP-L46 39S mitochondrial ribosomal protein L46 pfam11805 2 2 100.0 DUF3326 Protein of unknown function (DUF3326) pfam11831 2 2 100.0 Myb_Cef pre-mRNA splicing factor component pfam11894 2 2 100.0 Nup192 Nuclear pore complex scaffold pfam12022 2 2 100.0 DUF3510 Domain of unknown function (DUF3510) pfam12046 2 2 100.0 DUF3529 Protein of unknown function (DUF3529) pfam12054 2 2 100.0 DUF3535 Domain of unknown function (DUF3535) pfam12090 2 2 100.0 Spt20 Spt20 family pfam12341 2 2 100.0 Mcl1_mid Minichromosome loss protein pfam12422 2 2 100.0 Condensin2nSMC Condensin II non structural maintenance pfam12430 2 2 100.0 ABA_GPCR Abscisic acid G-protein coupled receptor pfam12452 2 2 100.0 DUF3685 Protein of unknown function (DUF3685) pfam12830 2 2 100.0 Nipped-B_C Sister chromatid cohesion C-terminus pfam12895 2 2 100.0 ANAPC3 Anaphase-promoting complex pfam12936 2 2 100.0 Kri1_C KRI1-like family C-terminal pfam13001 2 2 100.0 Ecm29 Proteasome stabilizer pfam13236 2 2 100.0 CLU Clustered mitochondria pfam13251 2 2 100.0 DUF4042 Domain of unknown function (DUF4042) pfam13442 2 2 100.0 Cytochrome_CBB3 Cytochrome C oxidase pfam13679 2 2 100.0 Methyltransf_32 Methyltransferase domain pfam13899 2 2 100.0 Thioredoxin_7 Thioredoxin-like pfam13901 2 2 100.0 zf-RING_9 Putative zinc-RING and/or ribbon pfam13902 2 2 100.0 R3H-assoc R3H-associated N-terminal domain pfam14443 2 2 100.0 DBC1 DBC1 pfam14520 2 2 100.0 HHH_5 Helix-hairpin-helix domain pfam14647 2 2 100.0 FAM91_N FAM91 N-terminus pfam14655 2 2 100.0 RAB3GAP2_N Rab3 GTPase-activating protein regulatory pfam14712 2 2 100.0 Snapin_Pallidin Snapin/Pallidin pfam14792 2 2 100.0 DNA_pol_B_palm DNA polymerase beta palm pfam14953 2 2 100.0 DUF4504 Domain of unknown function (DUF4504) pfam15306 2 2 100.0 LIN37 LIN37 pfam15477 2 2 100.0 SMAP Small acidic protein family pfam16029 2 2 100.0 DUF4787 Domain of unknown function (DUF4787) pfam16035 2 2 100.0 Chalcone_2 Chalcone isomerase like pfam16208 2 2 100.0 Keratin_2_head Keratin type II head pfam16413 2 2 100.0 Mlh1_C DNA mismatch repair protein Mlh1 C-terminus pfam16507 2 2 100.0 BLM10_mid Proteasome-substrate-size regulator pfam16653 2 2 100.0 Sacchrp_dh_C Saccharopine dehydrogenase C-terminal pfam16835 2 2 100.0 SF3A2 Pre-mRNA-splicing factor SF3a complex subunit 2 pfam16899 2 2 100.0 Cyclin_C_2 Cyclin C-terminal domain pfam00562 2 1 50.0 RNA_pol_Rpb2_6 RNA polymerase Rpb2 pfam00613 2 1 50.0 PI3Ka Phosphoinositide 3-kinase family pfam00677 2 1 50.0 Lum_binding Lumazine binding domain pfam00764 2 1 50.0 Arginosuc_synth Arginosuccinate synthase pfam00881 2 1 50.0 Nitroreductase Nitroreductase family pfam01134 2 1 50.0 GIDA Glucose inhibited division protein A pfam01142 2 1 50.0 TruD tRNA pseudouridine synthase D (TruD) pfam01259 2 1 50.0 SAICAR_synt SAICAR synthetase pfam01273 2 1 50.0 LBP_BPI_CETP LBP / BPI / CETP family pfam01327 2 1 50.0 Pep_deformylase Polypeptide deformylase pfam01351 2 1 50.0 RNase_HII Ribonuclease HII pfam01656 2 1 50.0 CbiA CobQ/CobB/MinD/ParA nucleotide binding domain pfam01809 2 1 50.0 Haemolytic Haemolytic domain pfam01871 2 1 50.0 AMMECR1 AMMECR1 pfam01964 2 1 50.0 ThiC_Rad_SAM Radical SAM ThiC family pfam01987 2 1 50.0 AIM24 Mitochondrial biogenesis AIM24 pfam02033 2 1 50.0 RBFA Ribosome-binding factor A pfam02068 2 1 50.0 Metallothio_PEC Plant PEC family metallothionein pfam02137 2 1 50.0 A_deamin Adenosine-deaminase (editase) domain pfam02423 2 1 50.0 OCD_Mu_crystall Ornithine cyclodeaminase/mu-crystallin pfam02538 2 1 50.0 Hydantoinase_B Hydantoinase B/oxoprolinase pfam02585 2 1 50.0 PIG-L GlcNAc-PI de-N-acetylase pfam02631 2 1 50.0 RecX RecX family pfam02731 2 1 50.0 SKIP_SNW SKIP/SNW domain pfam02811 2 1 50.0 PHP PHP domain pfam02873 2 1 50.0 MurB_C UDP-N-acetylenolpyruvoylglucosamine reductase pfam02956 2 1 50.0 TT_ORF1 TT viral orf 1 pfam03054 2 1 50.0 tRNA_Me_trans tRNA methyl transferase pfam03069 2 1 50.0 FmdA_AmdA Acetamidase/Formamidase family pfam03167 2 1 50.0 UDG Uracil DNA glycosylase superfamily pfam03193 2 1 50.0 DUF258 Protein of unknown function pfam03266 2 1 50.0 NTPase_1 NTPase pfam03453 2 1 50.0 MoeA_N MoeA N-terminal region (domain I and II) pfam03618 2 1 50.0 Kinase-PPPase Kinase/pyrophosphorylase pfam03639 2 1 50.0 Glyco_hydro_81 Glycosyl hydrolase family 81 pfam03741 2 1 50.0 TerC Integral membrane protein TerC family pfam03850 2 1 50.0 Tfb4 Transcription factor Tfb4 pfam04050 2 1 50.0 Upf2 Up-frameshift suppressor 2 pfam04056 2 1 50.0 Ssl1 Ssl1-like pfam04107 2 1 50.0 GCS2 Glutamate-cysteine ligase family 2(GCS2) pfam04110 2 1 50.0 APG12 Ubiquitin-like autophagy protein Apg12 pfam04129 2 1 50.0 Vps52 Vps52 / Sac2 family pfam04136 2 1 50.0 Sec34 Sec34-like family pfam04172 2 1 50.0 LrgB LrgB-like family pfam04181 2 1 50.0 RPAP2_Rtr1 Rtr1/RPAP2 family pfam04209 2 1 50.0 HgmA homogentisate 1 pfam04227 2 1 50.0 Indigoidine_A Indigoidine synthase A like protein pfam04241 2 1 50.0 DUF423 Protein of unknown function (DUF423) pfam04321 2 1 50.0 RmlD_sub_bind RmlD substrate binding domain pfam04780 2 1 50.0 DUF629 Protein of unknown function (DUF629) pfam04889 2 1 50.0 Cwf_Cwc_15 Cwf15/Cwc15 cell cycle control protein pfam04921 2 1 50.0 XAP5 XAP5 pfam04935 2 1 50.0 SURF6 Surfeit locus protein 6 pfam04968 2 1 50.0 CHORD CHORD pfam04987 2 1 50.0 PigN Phosphatidylinositolglycan class N (PIG-N) pfam05064 2 1 50.0 Nsp1_C Nsp1-like C-terminal region pfam05160 2 1 50.0 DSS1_SEM1 DSS1/SEM1 family pfam05254 2 1 50.0 UPF0203 uncharacterized protein family (UPF0203) pfam05285 2 1 50.0 SDA1 SDA1 pfam05291 2 1 50.0 Bystin Bystin pfam05348 2 1 50.0 UMP1 Proteasome maturation factor UMP1 pfam05460 2 1 50.0 ORC6 Origin recognition complex subunit 6 (ORC6) pfam05462 2 1 50.0 Dicty_CAR Slime mold cyclic AMP receptor pfam05600 2 1 50.0 DUF773 Protein of unknown function (DUF773) pfam05645 2 1 50.0 RNA_pol_Rpc82 RNA polymerase III subunit RPC82 pfam05697 2 1 50.0 Trigger_N Bacterial trigger factor protein (TF) pfam05743 2 1 50.0 UEV UEV domain pfam05822 2 1 50.0 UMPH-1 Pyrimidine 5'-nucleotidase (UMPH-1) pfam06179 2 1 50.0 Med22 Surfeit locus protein 5 subunit 22 of Mediator pfam06549 2 1 50.0 DUF1118 Protein of unknown function (DUF1118) pfam06632 2 1 50.0 XRCC4 DNA double-strand break repair and V(D)J pfam06741 2 1 50.0 LsmAD LsmAD domain pfam06803 2 1 50.0 DUF1232 Protein of unknown function (DUF1232) pfam07035 2 1 50.0 Mic1 Colon cancer-associated protein Mic1-like pfam07264 2 1 50.0 EI24 Etoposide-induced protein 2 pfam07539 2 1 50.0 DRIM Down-regulated in metastasis pfam07713 2 1 50.0 DUF1604 Protein of unknown function (DUF1604) pfam07728 2 1 50.0 AAA_5 AAA domain (dynein-related subfamily) pfam07743 2 1 50.0 HSCB_C HSCB C-terminal oligomerization domain pfam07749 2 1 50.0 ERp29 Endoplasmic reticulum protein ERp29 pfam07959 2 1 50.0 Fucokinase L-fucokinase pfam07985 2 1 50.0 SRR1 SRR1 pfam08510 2 1 50.0 PIG-P PIG-P pfam08660 2 1 50.0 Alg14 Oligosaccharide biosynthesis protein Alg14 like pfam08676 2 1 50.0 MutL_C MutL C terminal dimerization domain pfam08737 2 1 50.0 Rgp1 Rgp1 pfam08799 2 1 50.0 PRP4 pre-mRNA processing factor 4 (PRP4) like pfam09350 2 1 50.0 DUF1992 Domain of unknown function (DUF1992) pfam09402 2 1 50.0 MSC Man1-Src1p-C-terminal domain pfam09430 2 1 50.0 DUF2012 Protein of unknown function (DUF2012) pfam09585 2 1 50.0 Lin0512_fam Conserved hypothetical protein pfam09696 2 1 50.0 Ctf8 Ctf8 pfam09732 2 1 50.0 CactinC_cactus Cactus-binding C-terminus of cactin pfam09734 2 1 50.0 Tau95 RNA polymerase III transcription factor (TF)IIIC pfam09753 2 1 50.0 Use1 Membrane fusion protein Use1 pfam09765 2 1 50.0 WD-3 WD-repeat region pfam09766 2 1 50.0 FimP Fms-interacting protein pfam09791 2 1 50.0 Oxidored-like Oxidoreductase-like protein pfam09797 2 1 50.0 NatB_MDM20 N-acetyltransferase B complex (NatB) non pfam09810 2 1 50.0 Exo5 Exonuclease V - a 5' deoxyribonuclease pfam10181 2 1 50.0 PIG-H GPI-GlcNAc transferase complex pfam10218 2 1 50.0 DUF2054 Uncharacterized conserved protein (DUF2054) pfam10258 2 1 50.0 RNA_GG_bind PHAX RNA-binding domain pfam10275 2 1 50.0 Peptidase_C65 Peptidase C65 Otubain pfam10382 2 1 50.0 DUF2439 Protein of unknown function (DUF2439) pfam10458 2 1 50.0 Val_tRNA-synt_C Valyl tRNA synthetase tRNA binding arm pfam10496 2 1 50.0 Syntaxin-18_N SNARE-complex protein Syntaxin-18 pfam10639 2 1 50.0 TMEM234 Putative transmembrane family 234 pfam10644 2 1 50.0 Misat_Tub_SegII Misato Segment II tubulin-like domain pfam10716 2 1 50.0 NdhL NADH dehydrogenase transmembrane subunit pfam10780 2 1 50.0 MRP_L53 39S ribosomal protein L53/MRP-L53 pfam10996 2 1 50.0 Beta-Casp Beta-Casp domain pfam11255 2 1 50.0 DUF3054 Protein of unknown function (DUF3054) pfam11341 2 1 50.0 DUF3143 Protein of unknown function (DUF3143) pfam11573 2 1 50.0 Med23 Mediator complex subunit 23 pfam11712 2 1 50.0 Vma12 Endoplasmic reticulum-based factor for assembly pfam11910 2 1 50.0 NdhO Cyanobacterial and plant NDH-1 subunit O pfam12036 2 1 50.0 DUF3522 Protein of unknown function (DUF3522) pfam12157 2 1 50.0 DUF3591 Protein of unknown function (DUF3591) pfam12766 2 1 50.0 Pyridox_oxase_2 Pyridoxamine 5'-phosphate oxidase pfam12923 2 1 50.0 RRP7 Ribosomal RNA-processing protein 7 (RRP7) pfam13385 2 1 50.0 Laminin_G_3 Concanavalin A-like lectin/glucanases pfam13483 2 1 50.0 Lactamase_B_3 Beta-lactamase superfamily domain pfam13638 2 1 50.0 PIN_4 PIN domain pfam13671 2 1 50.0 AAA_33 AAA domain pfam13691 2 1 50.0 Lactamase_B_4 tRNase Z endonuclease pfam13720 2 1 50.0 Acetyltransf_11 Udp N-acetylglucosamine pfam13764 2 1 50.0 E3_UbLigase_R4 E3 ubiquitin-protein ligase UBR4 pfam13821 2 1 50.0 DUF4187 Domain of unknown function (DUF4187) pfam13857 2 1 50.0 Ank_5 Ankyrin repeats (many copies) pfam13874 2 1 50.0 Nup54 Nucleoporin complex subunit 54 pfam13898 2 1 50.0 DUF4205 Domain of unknown function (DUF4205) pfam14200 2 1 50.0 RicinB_lectin_2 Ricin-type beta-trefoil lectin pfam14290 2 1 50.0 DUF4370 Domain of unknown function (DUF4370) pfam14683 2 1 50.0 CBM-like Polysaccharide lyase family 4 pfam14695 2 1 50.0 LINES_C Lines C-terminus pfam14735 2 1 50.0 HAUS4 HAUS augmin-like complex subunit 4 pfam14817 2 1 50.0 HAUS5 HAUS augmin-like complex subunit 5 pfam15469 2 1 50.0 Sec5 Exocyst complex component Sec5 pfam15490 2 1 50.0 Ten1_2 Telomere-capping pfam15491 2 1 50.0 CTC1_2 CST pfam16001 2 1 50.0 DUF4775 Domain of unknown function (DUF4775) pfam16053 2 1 50.0 MRP-S34 Mitochondrial 28S ribosomal protein S34 pfam16282 2 1 50.0 SANT_DAMP1_like SANT/Myb-like domain of DAMP1 pfam16863 2 1 50.0 NtCtMGAM_N N-terminal barrel of NtMGAM and CtMGAM pfam00185 2 0 0.0 OTCace Aspartate/ornithine carbamoyltransferase pfam00186 2 0 0.0 DHFR_1 Dihydrofolate reductase pfam00204 2 0 0.0 DNA_gyraseB DNA gyrase B pfam00290 2 0 0.0 Trp_syntA Tryptophan synthase alpha chain pfam00396 2 0 0.0 Granulin Granulin pfam00444 2 0 0.0 Ribosomal_L36 Ribosomal protein L36 pfam00475 2 0 0.0 IGPD Imidazoleglycerol-phosphate dehydratase pfam00478 2 0 0.0 IMPDH IMP dehydrogenase / GMP reductase domain pfam00512 2 0 0.0 HisKA His Kinase A (phospho-acceptor) domain pfam00521 2 0 0.0 DNA_topoisoIV DNA gyrase/topoisomerase IV pfam00692 2 0 0.0 dUTPase dUTPase pfam00698 2 0 0.0 Acyl_transf_1 Acyl transferase domain pfam00705 2 0 0.0 PCNA_N Proliferating cell nuclear antigen pfam00763 2 0 0.0 THF_DHG_CYH Tetrahydrofolate pfam00766 2 0 0.0 ETF_alpha Electron transfer flavoprotein FAD-binding pfam00984 2 0 0.0 UDPG_MGDP_dh UDP-glucose/GDP-mannose dehydrogenase pfam01012 2 0 0.0 ETF Electron transfer flavoprotein domain pfam01014 2 0 0.0 Uricase Uricase pfam01087 2 0 0.0 GalP_UDP_transf Galactose-1-phosphate uridyl pfam01137 2 0 0.0 RTC RNA 3'-terminal phosphate cyclase pfam01163 2 0 0.0 RIO1 RIO1 family pfam01180 2 0 0.0 DHO_dh Dihydroorotate dehydrogenase pfam01197 2 0 0.0 Ribosomal_L31 Ribosomal protein L31 pfam01213 2 0 0.0 CAP_N Adenylate cyclase associated (CAP) N terminal pfam01239 2 0 0.0 PPTA Protein prenyltransferase alpha subunit repeat pfam01264 2 0 0.0 Chorismate_synt Chorismate synthase pfam01323 2 0 0.0 DSBA DSBA-like thioredoxin domain pfam01336 2 0 0.0 tRNA_anti-codon OB-fold nucleic acid binding domain pfam01343 2 0 0.0 Peptidase_S49 Peptidase family S49 pfam01493 2 0 0.0 GXGXG GXGXG motif pfam01575 2 0 0.0 MaoC_dehydratas MaoC like domain pfam01576 2 0 0.0 Myosin_tail_1 Myosin tail pfam01594 2 0 0.0 UPF0118 Domain of unknown function DUF20 pfam01649 2 0 0.0 Ribosomal_S20p Ribosomal protein S20 pfam01678 2 0 0.0 DAP_epimerase Diaminopimelate epimerase pfam01712 2 0 0.0 dNK Deoxynucleoside kinase pfam01730 2 0 0.0 UreF UreF pfam01746 2 0 0.0 tRNA_m1G_MT tRNA (Guanine-1)-methyltransferase pfam01843 2 0 0.0 DIL DIL domain pfam01896 2 0 0.0 DNA_primase_S Eukaryotic and archaeal DNA primase small pfam01903 2 0 0.0 CbiX CbiX pfam01928 2 0 0.0 CYTH CYTH domain pfam01960 2 0 0.0 ArgJ ArgJ family pfam01980 2 0 0.0 UPF0066 uncharacterized protein family UPF0066 pfam02041 2 0 0.0 Auxin_BP Auxin binding protein pfam02130 2 0 0.0 UPF0054 Uncharacterized protein family UPF0054 pfam02170 2 0 0.0 PAZ PAZ domain pfam02254 2 0 0.0 TrkA_N TrkA-N domain pfam02291 2 0 0.0 TFIID-31kDa Transcription initiation factor IID pfam02301 2 0 0.0 HORMA HORMA domain pfam02348 2 0 0.0 CTP_transf_3 Cytidylyltransferase pfam02502 2 0 0.0 LacAB_rpiB Ribose/Galactose Isomerase pfam02540 2 0 0.0 NAD_synthase NAD synthase pfam02541 2 0 0.0 Ppx-GppA Ppx/GppA phosphatase family pfam02562 2 0 0.0 PhoH PhoH-like protein pfam02586 2 0 0.0 SRAP SOS response associated peptidase (SRAP) pfam02653 2 0 0.0 BPD_transp_2 Branched-chain amino acid transport system pfam02676 2 0 0.0 TYW3 Methyltransferase TYW3 pfam02679 2 0 0.0 ComA (2R)-phospho-3-sulfolactate synthase (ComA) pfam02686 2 0 0.0 Glu-tRNAGln Glu-tRNAGln amidotransferase C subunit pfam02729 2 0 0.0 OTCace_N Aspartate/ornithine carbamoyltransferase pfam02812 2 0 0.0 ELFV_dehydrog_N Glu/Leu/Phe/Val dehydrogenase pfam02844 2 0 0.0 GARS_N Phosphoribosylglycinamide synthetase pfam02883 2 0 0.0 Alpha_adaptinC2 Adaptin C-terminal domain pfam02906 2 0 0.0 Fe_hyd_lg_C Iron only hydrogenase large subunit pfam02926 2 0 0.0 THUMP THUMP domain pfam02929 2 0 0.0 Bgal_small_N Beta galactosidase small chain pfam02970 2 0 0.0 TBCA Tubulin binding cofactor A pfam03015 2 0 0.0 Sterile Male sterility protein pfam03071 2 0 0.0 GNT-I GNT-I family pfam03073 2 0 0.0 TspO_MBR TspO/MBR family pfam03100 2 0 0.0 CcmE CcmE pfam03121 2 0 0.0 Herpes_UL52 Herpesviridae UL52/UL70 DNA primase pfam03144 2 0 0.0 GTP_EFTU_D2 Elongation factor Tu domain 2 pfam03161 2 0 0.0 LAGLIDADG_2 LAGLIDADG DNA endonuclease family pfam03200 2 0 0.0 Glyco_hydro_63 Glycosyl hydrolase family 63 C-terminal pfam03215 2 0 0.0 Rad17 Rad17 cell cycle checkpoint protein pfam03244 2 0 0.0 PSI_PsaH Photosystem I reaction centre subunit VI pfam03328 2 0 0.0 HpcH_HpaI HpcH/HpaI aldolase/citrate lyase family pfam03367 2 0 0.0 zf-ZPR1 ZPR1 zinc-finger domain pfam03378 2 0 0.0 CAS_CSE1 CAS/CSE protein pfam03404 2 0 0.0 Mo-co_dimer Mo-co oxidoreductase dimerization domain pfam03435 2 0 0.0 Sacchrp_dh_NADP Saccharopine dehydrogenase NADP binding pfam03447 2 0 0.0 NAD_binding_3 Homoserine dehydrogenase pfam03465 2 0 0.0 eRF1_3 eRF1 domain 3 pfam03473 2 0 0.0 MOSC MOSC domain pfam03522 2 0 0.0 SLC12 Solute carrier family 12 pfam03568 2 0 0.0 Peptidase_C50 Peptidase family C50 pfam03602 2 0 0.0 Cons_hypoth95 Conserved hypothetical protein 95 pfam03649 2 0 0.0 UPF0014 uncharacterized protein family (UPF0014) pfam03665 2 0 0.0 UPF0172 uncharacterized protein family (UPF0172) pfam03669 2 0 0.0 UPF0139 uncharacterized protein family (UPF0139) pfam03676 2 0 0.0 UPF0183 uncharacterized protein family (UPF0183) pfam03703 2 0 0.0 bPH_2 Bacterial PH domain pfam03720 2 0 0.0 UDPG_MGDP_dh_C UDP-glucose/GDP-mannose dehydrogenase pfam03776 2 0 0.0 MinE Septum formation topological specificity factor pfam03834 2 0 0.0 Rad10 Binding domain of DNA repair protein Ercc1 pfam03853 2 0 0.0 YjeF_N YjeF-related protein N-terminus pfam03908 2 0 0.0 Sec20 Sec20 pfam03981 2 0 0.0 Ubiq_cyt_C_chap Ubiquinol-cytochrome C chaperone pfam03987 2 0 0.0 Autophagy_act_C Autophagocytosis associated protein pfam04005 2 0 0.0 Hus1 Hus1-like protein pfam04032 2 0 0.0 Rpr2 RNAse P Rpr2/Rpp21/SNM1 subunit domain pfam04034 2 0 0.0 DUF367 Domain of unknown function (DUF367) pfam04037 2 0 0.0 DUF382 Domain of unknown function (DUF382) pfam04046 2 0 0.0 PSP PSP pfam04068 2 0 0.0 RLI Possible Fer4-like domain in RNase L inhibitor pfam04114 2 0 0.0 Gaa1 Gaa1-like pfam04139 2 0 0.0 Rad9 Rad9 pfam04176 2 0 0.0 TIP41 TIP41-like family pfam04177 2 0 0.0 TAP42 TAP42-like family pfam04180 2 0 0.0 LTV Low temperature viability protein pfam04189 2 0 0.0 Gcd10p Gcd10p family pfam04339 2 0 0.0 FemAB_like Peptidogalycan biosysnthesis/recognition pfam04371 2 0 0.0 PAD_porph Porphyromonas-type peptidyl-arginine pfam04446 2 0 0.0 Thg1 tRNAHis guanylyltransferase pfam04488 2 0 0.0 Gly_transf_sug Glycosyltransferase sugar-binding region pfam04494 2 0 0.0 TFIID_NTD2 WD40 associated region in TFIID subunit pfam04536 2 0 0.0 TPM TLP18 pfam04707 2 0 0.0 PRELI PRELI-like family pfam04722 2 0 0.0 Ssu72 Ssu72-like protein pfam04725 2 0 0.0 PsbR Photosystem II 10 kDa polypeptide PsbR pfam04729 2 0 0.0 ASF1_hist_chap ASF1 like histone chaperone pfam04762 2 0 0.0 IKI3 IKI3 family pfam04828 2 0 0.0 GFA Glutathione-dependent formaldehyde-activating pfam04836 2 0 0.0 IFRD_C Interferon-related protein conserved region pfam04898 2 0 0.0 Glu_syn_central Glutamate synthase central domain pfam04909 2 0 0.0 Amidohydro_2 Amidohydrolase pfam04910 2 0 0.0 Tcf25 Transcriptional repressor TCF25 pfam04931 2 0 0.0 DNA_pol_phi DNA polymerase phi pfam04938 2 0 0.0 SIP1 Survival motor neuron (SMN) interacting protein 1 pfam05018 2 0 0.0 DUF667 Protein of unknown function (DUF667) pfam05019 2 0 0.0 Coq4 Coenzyme Q (ubiquinone) biosynthesis protein Coq4 pfam05024 2 0 0.0 Gpi1 N-acetylglucosaminyl transferase component (Gpi1) pfam05071 2 0 0.0 NDUFA12 NADH ubiquinone oxidoreductase subunit pfam05148 2 0 0.0 Methyltransf_8 Hypothetical methyltransferase pfam05158 2 0 0.0 RNA_pol_Rpc34 RNA polymerase Rpc34 subunit pfam05175 2 0 0.0 MTS Methyltransferase small domain pfam05187 2 0 0.0 ETF_QO Electron transfer flavoprotein-ubiquinone pfam05198 2 0 0.0 IF3_N Translation initiation factor IF-3 pfam05266 2 0 0.0 DUF724 Protein of unknown function (DUF724) pfam05421 2 0 0.0 DUF751 Protein of unknown function (DUF751) pfam05477 2 0 0.0 SURF2 Surfeit locus protein 2 (SURF2) pfam05486 2 0 0.0 SRP9-21 Signal recognition particle 9 kDa protein pfam05603 2 0 0.0 DUF775 Protein of unknown function (DUF775) pfam05615 2 0 0.0 THOC7 Tho complex subunit 7 pfam05620 2 0 0.0 DUF788 Protein of unknown function (DUF788) pfam05669 2 0 0.0 Med31 SOH1 pfam05698 2 0 0.0 Trigger_C Bacterial trigger factor protein (TF) pfam05764 2 0 0.0 YL1 YL1 nuclear protein pfam05856 2 0 0.0 ARPC4 ARP2/3 complex 20 kDa subunit (ARPC4) pfam05887 2 0 0.0 Trypan_PARP Procyclic acidic repetitive protein (PARP) pfam05890 2 0 0.0 Ebp2 Eukaryotic rRNA processing protein EBP2 pfam05958 2 0 0.0 tRNA_U5-meth_tr tRNA (Uracil-5-)-methyltransferase pfam05965 2 0 0.0 FYRC F/Y rich C-terminus pfam05983 2 0 0.0 Med7 MED7 protein pfam05994 2 0 0.0 FragX_IP Cytoplasmic Fragile-X interacting family pfam06047 2 0 0.0 SynMuv_product Ras-induced vulval development pfam06105 2 0 0.0 Aph-1 Aph-1 protein pfam06110 2 0 0.0 DUF953 Eukaryotic protein of unknown function (DUF953) pfam06221 2 0 0.0 zf-C2HC5 Putative zinc finger motif pfam06419 2 0 0.0 COG6 Conserved oligomeric complex COG6 pfam06424 2 0 0.0 PRP1_N PRP1 splicing factor pfam06432 2 0 0.0 GPI2 Phosphatidylinositol pfam06574 2 0 0.0 FAD_syn FAD synthetase pfam06658 2 0 0.0 DUF1168 Protein of unknown function (DUF1168) pfam06695 2 0 0.0 Sm_multidrug_ex Putative small multi-drug export pfam06728 2 0 0.0 PIG-U GPI transamidase subunit PIG-U pfam06838 2 0 0.0 Met_gamma_lyase Methionine gamma-lyase pfam06839 2 0 0.0 zf-GRF GRF zinc finger pfam06859 2 0 0.0 Bin3 Bicoid-interacting protein 3 (Bin3) pfam06862 2 0 0.0 UTP25 Utp25 pfam06870 2 0 0.0 RNA_pol_I_A49 A49-like RNA polymerase I associated pfam06968 2 0 0.0 BATS Biotin and Thiamin Synthesis associated domain pfam06984 2 0 0.0 MRP-L47 Mitochondrial 39-S ribosomal protein L47 pfam07064 2 0 0.0 RIC1 RIC1 pfam07093 2 0 0.0 SGT1 SGT1 protein pfam07106 2 0 0.0 TBPIP Tat binding protein 1(TBP-1)-interacting protein pfam07160 2 0 0.0 DUF1395 Protein of unknown function (DUF1395) pfam07189 2 0 0.0 SF3b10 Splicing factor 3B subunit 10 (SF3b10) pfam07200 2 0 0.0 Mod_r Modifier of rudimentary (Mod(r)) protein pfam07258 2 0 0.0 HCaRG HCaRG protein pfam07271 2 0 0.0 Cytadhesin_P30 Cytadhesin P30/P32 pfam07297 2 0 0.0 DPM2 Dolichol phosphate-mannose biosynthesis pfam07498 2 0 0.0 Rho_N Rho termination factor pfam07542 2 0 0.0 ATP12 ATP12 chaperone protein pfam07569 2 0 0.0 Hira TUP1-like enhancer of split pfam07575 2 0 0.0 Nucleopor_Nup85 Nup85 Nucleoporin pfam07767 2 0 0.0 Nop53 Nop53 (60S ribosomal biogenesis) pfam07780 2 0 0.0 Spb1_C Spb1 C-terminal domain pfam07786 2 0 0.0 DUF1624 Protein of unknown function (DUF1624) pfam07808 2 0 0.0 RED_N RED-like protein N-terminal region pfam07817 2 0 0.0 GLE1 GLE1-like protein pfam07884 2 0 0.0 VKOR Vitamin K epoxide reductase family pfam07896 2 0 0.0 DUF1674 Protein of unknown function (DUF1674) pfam07904 2 0 0.0 Eaf7 Chromatin modification-related protein EAF7 pfam07918 2 0 0.0 CAP160 CAP160 repeat pfam07926 2 0 0.0 TPR_MLP1_2 TPR/MLP1/MLP2-like protein pfam07928 2 0 0.0 Vps54 Vps54-like protein pfam07962 2 0 0.0 Swi3 Replication Fork Protection Component Swi3 pfam08084 2 0 0.0 PROCT PROCT (NUC072) domain pfam08144 2 0 0.0 CPL CPL (NUC119) domain pfam08149 2 0 0.0 BING4CT BING4CT (NUC141) domain pfam08155 2 0 0.0 NOGCT NOGCT (NUC087) domain pfam08209 2 0 0.0 Sgf11 Sgf11 (transcriptional regulation protein) pfam08238 2 0 0.0 Sel1 Sel1 repeat pfam08267 2 0 0.0 Meth_synt_1 Cobalamin-independent synthase pfam08315 2 0 0.0 cwf18 cwf18 pre-mRNA splicing factor pfam08324 2 0 0.0 PUL PUL domain pfam08492 2 0 0.0 SRP72 SRP72 RNA-binding domain pfam08501 2 0 0.0 Shikimate_dh_N Shikimate dehydrogenase substrate pfam08538 2 0 0.0 DUF1749 Protein of unknown function (DUF1749) pfam08544 2 0 0.0 GHMP_kinases_C GHMP kinases C terminal pfam08576 2 0 0.0 DUF1764 Eukaryotic protein of unknown function pfam08603 2 0 0.0 CAP_C Adenylate cyclase associated (CAP) C terminal pfam08612 2 0 0.0 Med20 TATA-binding related factor (TRF) of subunit 20 pfam08617 2 0 0.0 CGI-121 Kinase binding protein CGI-121 pfam08623 2 0 0.0 TIP120 TATA-binding protein interacting (TIP20) pfam08631 2 0 0.0 SPO22 Meiosis protein SPO22/ZIP4 like pfam08637 2 0 0.0 NCA2 ATP synthase regulation protein NCA2 pfam08661 2 0 0.0 Rep_fac-A_3 Replication factor A protein 3 pfam08672 2 0 0.0 ANAPC2 Anaphase promoting complex (APC) subunit 2 pfam08696 2 0 0.0 Dna2 DNA replication factor Dna2 pfam08698 2 0 0.0 Fcf2 Fcf2 pre-rRNA processing pfam08701 2 0 0.0 GN3L_Grn1 GNL3L/Grn1 putative GTPase pfam08744 2 0 0.0 NOZZLE Plant transcription factor NOZZLE pfam08752 2 0 0.0 COP-gamma_platf Coatomer gamma subunit appendage pfam08771 2 0 0.0 Rapamycin_bind Rapamycin binding domain pfam08772 2 0 0.0 NOB1_Zn_bind Nin one binding (NOB1) Zn-ribbon like pfam08790 2 0 0.0 zf-LYAR LYAR-type C2HC zinc finger pfam08806 2 0 0.0 Sep15_SelM Sep15/SelM redox domain pfam08847 2 0 0.0 DUF1817 Domain of unknown function (DUF1817) pfam08920 2 0 0.0 SF3b1 Splicing factor 3B subunit 1 pfam09066 2 0 0.0 B2-adapt-app_C Beta2-adaptin appendage pfam09072 2 0 0.0 TMA7 Translation machinery associated TMA7 pfam09079 2 0 0.0 Cdc6_C CDC6 pfam09138 2 0 0.0 Urm1 Urm1 (Ubiquitin related modifier) pfam09243 2 0 0.0 Rsm22 Mitochondrial small ribosomal subunit Rsm22 pfam09325 2 0 0.0 Vps5 Vps5 C terminal like pfam09329 2 0 0.0 zf-primase Primase zinc finger pfam09348 2 0 0.0 DUF1990 Domain of unknown function (DUF1990) pfam09377 2 0 0.0 SBDS_C SBDS protein C-terminal domain pfam09384 2 0 0.0 UTP15_C UTP15 C terminal pfam09420 2 0 0.0 Nop16 Ribosome biogenesis protein Nop16 pfam09429 2 0 0.0 Wbp11 WW domain binding protein 11 pfam09446 2 0 0.0 VMA21 VMA21-like domain pfam09451 2 0 0.0 ATG27 Autophagy-related protein 27 pfam09597 2 0 0.0 IGR IGR protein motif pfam09668 2 0 0.0 Asp_protease Aspartyl protease pfam09725 2 0 0.0 Fra10Ac1 Folate-sensitive fragile site protein pfam09737 2 0 0.0 Det1 De-etiolated protein 1 Det1 pfam09754 2 0 0.0 PAC2 PAC2 family pfam09756 2 0 0.0 DDRGK DDRGK domain pfam09793 2 0 0.0 AD Anticodon-binding domain pfam09805 2 0 0.0 Nop25 Nucleolar protein 12 (25kDa) pfam09807 2 0 0.0 ELP6 Elongation complex protein 6 pfam09849 2 0 0.0 DUF2076 Uncharacterized protein conserved in bacteria pfam10063 2 0 0.0 DUF2301 Uncharacterized integral membrane protein pfam10159 2 0 0.0 MMtag Kinase phosphorylation protein pfam10203 2 0 0.0 Pet191_N Cytochrome c oxidase assembly protein pfam10235 2 0 0.0 Cript Microtubule-associated protein CRIPT pfam10236 2 0 0.0 DAP3 Mitochondrial ribosomal death-associated protein pfam10238 2 0 0.0 Eapp_C E2F-associated phosphoprotein pfam10251 2 0 0.0 PEN-2 Presenilin enhancer-2 subunit of gamma secretase pfam10262 2 0 0.0 Rdx Rdx family pfam10280 2 0 0.0 Med11 Mediator complex protein pfam10291 2 0 0.0 muHD Muniscin C-terminal mu homology domain pfam10310 2 0 0.0 DUF2413 Protein of unknown function (DUF2413) pfam10345 2 0 0.0 Cohesin_load Cohesin loading factor pfam10366 2 0 0.0 Vps39_1 Vacuolar sorting protein 39 domain 1 pfam10377 2 0 0.0 ATG11 Autophagy-related protein 11 pfam10436 2 0 0.0 BCDHK_Adom3 Mitochondrial branched-chain alpha-ketoacid pfam10442 2 0 0.0 FIST_C FIST C domain pfam10494 2 0 0.0 Stk19 Serine-threonine protein kinase 19 pfam10508 2 0 0.0 Proteasom_PSMB Proteasome non-ATPase 26S subunit pfam10520 2 0 0.0 TMEM189_B_dmain B domain of TMEM189 pfam10561 2 0 0.0 UPF0565 uncharacterized protein family UPF0565 pfam10584 2 0 0.0 Proteasome_A_N Proteasome subunit A N-terminal pfam10664 2 0 0.0 NdhM Cyanobacterial and plastid NDH-1 subunit M pfam10672 2 0 0.0 Methyltrans_SAM S-adenosylmethionine-dependent pfam10674 2 0 0.0 Ycf54 Protein of unknown function (DUF2488) pfam10693 2 0 0.0 DUF2499 Protein of unknown function (DUF2499) pfam10699 2 0 0.0 HAP2-GCS1 Male gamete fusion factor pfam10714 2 0 0.0 LEA_6 Late embryogenesis abundant protein 18 pfam11264 2 0 0.0 ThylakoidFormat Thylakoid formation protein pfam11317 2 0 0.0 DUF3119 Protein of unknown function (DUF3119) pfam11493 2 0 0.0 TSP9 Thylakoid soluble phosphoprotein TSP9 pfam11510 2 0 0.0 FA_FANCE Fanconi Anaemia group E protein FANCE pfam11571 2 0 0.0 Med27 Mediator complex subunit 27 pfam11623 2 0 0.0 DUF3252 Protein of unknown function (DUF3252) pfam11789 2 0 0.0 zf-Nse Zinc-finger of the MIZ type in Nse subunit pfam11923 2 0 0.0 DUF3441 Domain of unknown function (DUF3441) pfam11934 2 0 0.0 DUF3452 Domain of unknown function (DUF3452) pfam11938 2 0 0.0 DUF3456 TLR4 regulator and MIR-interacting MSAP pfam11957 2 0 0.0 efThoc1 THO complex subunit 1 transcription elongation pfam12002 2 0 0.0 MgsA_C MgsA AAA+ ATPase C terminal pfam12066 2 0 0.0 DUF3546 Domain of unknown function (DUF3546) pfam12074 2 0 0.0 DUF3554 Domain of unknown function (DUF3554) pfam12110 2 0 0.0 Nup96 Nuclear protein 96 pfam12159 2 0 0.0 DUF3593 Protein of unknown function (DUF3593) pfam12171 2 0 0.0 zf-C2H2_jaz Zinc-finger double-stranded RNA-binding pfam12215 2 0 0.0 GBA2_N beta-Glucocerebrosidase 2 N terminal pfam12234 2 0 0.0 Rav1p_C RAVE protein 1 C terminal pfam12248 2 0 0.0 Methyltransf_FA Farnesoic acid 0-methyl transferase pfam12330 2 0 0.0 DUF3635 Domain of unknown function (DUF3635) pfam12371 2 0 0.0 TMEM131_like Transmembrane protein 131-like pfam12394 2 0 0.0 DUF3657 Protein of unknown function (DUF3657) pfam12451 2 0 0.0 VPS11_C Vacuolar protein sorting protein 11 C terminal pfam12513 2 0 0.0 SUV3_C Mitochondrial degradasome RNA helicase subunit C pfam12527 2 0 0.0 DUF3727 Protein of unknown function (DUF3727) pfam12530 2 0 0.0 DUF3730 Protein of unknown function (DUF3730) pfam12542 2 0 0.0 CWC25 Pre-mRNA splicing factor pfam12552 2 0 0.0 DUF3741 Protein of unknown function (DUF3741) pfam12572 2 0 0.0 DUF3752 Protein of unknown function (DUF3752) pfam12589 2 0 0.0 WBS_methylT Methyltransferase involved in pfam12612 2 0 0.0 TFCD_C Tubulin folding cofactor D C terminal pfam12631 2 0 0.0 MnmE_helical MnmE helical domain pfam12646 2 0 0.0 DUF3783 Domain of unknown function (DUF3783) pfam12656 2 0 0.0 G-patch_2 DExH-box splicing factor binding site pfam12657 2 0 0.0 TFIIIC_delta Transcription factor IIIC subunit delta pfam12680 2 0 0.0 SnoaL_2 SnoaL-like domain pfam12719 2 0 0.0 Cnd3 Nuclear condensing complex subunits pfam12751 2 0 0.0 Vac7 Vacuolar segregation subunit 7 pfam12816 2 0 0.0 Vps8 Golgi CORVET complex core vacuolar protein 8 pfam12859 2 0 0.0 ANAPC1 Anaphase-promoting complex subunit 1 pfam12861 2 0 0.0 zf-ANAPC11 Anaphase-promoting complex subunit 11 pfam12872 2 0 0.0 OST-HTH OST-HTH/LOTUS domain pfam13012 2 0 0.0 MitMem_reg Maintenance of mitochondrial structure and pfam13019 2 0 0.0 Telomere_Sde2 Telomere stability and silencing pfam13020 2 0 0.0 DUF3883 Domain of unknown function (DUF3883) pfam13086 2 0 0.0 AAA_11 AAA domain pfam13320 2 0 0.0 DUF4091 Domain of unknown function (DUF4091) pfam13324 2 0 0.0 GCIP Grap2 and cyclin-D-interacting pfam13334 2 0 0.0 DUF4094 Domain of unknown function (DUF4094) pfam13445 2 0 0.0 zf-RING_UBOX RING-type zinc-finger pfam13489 2 0 0.0 Methyltransf_23 Methyltransferase domain pfam13579 2 0 0.0 Glyco_trans_4_4 Glycosyl transferase 4-like domain pfam13593 2 0 0.0 SBF_like SBF-like CPA transporter family (DUF4137) pfam13603 2 0 0.0 tRNA-synt_1_2 Leucyl-tRNA synthetase pfam13620 2 0 0.0 CarboxypepD_reg Carboxypeptidase regulatory-like domain pfam13718 2 0 0.0 GNAT_acetyltr_2 GNAT acetyltransferase 2 pfam13738 2 0 0.0 Pyr_redox_3 Pyridine nucleotide-disulphide pfam13806 2 0 0.0 Rieske_2 Rieske-like [2Fe-2S] domain pfam13850 2 0 0.0 ERGIC_N Endoplasmic Reticulum-Golgi Intermediate pfam13851 2 0 0.0 GAS Growth-arrest specific micro-tubule binding pfam13949 2 0 0.0 ALIX_LYPXL_bnd ALIX V-shaped domain binding to HIV pfam13952 2 0 0.0 DUF4216 Domain of unknown function (DUF4216) pfam14214 2 0 0.0 Helitron_like_N Helitron helicase-like domain at pfam14306 2 0 0.0 PUA_2 PUA-like domain pfam14369 2 0 0.0 zinc_ribbon_9 zinc-ribbon pfam14492 2 0 0.0 EFG_II Elongation Factor G pfam14542 2 0 0.0 Acetyltransf_CG GCN5-related N-acetyl-transferase pfam14617 2 0 0.0 CMS1 U3-containing 90S pre-ribosomal complex subunit pfam14622 2 0 0.0 Ribonucleas_3_3 Ribonuclease-III-like pfam14631 2 0 0.0 FancD2 Fanconi anaemia protein FancD2 nuclease pfam14649 2 0 0.0 Spatacsin_C Spatacsin C-terminus pfam14705 2 0 0.0 Costars Costars pfam14748 2 0 0.0 P5CR_dimer Pyrroline-5-carboxylate reductase pfam14749 2 0 0.0 Acyl-CoA_ox_N Acyl-coenzyme A oxidase N-terminal pfam14770 2 0 0.0 TMEM18 Transmembrane protein 18 pfam14796 2 0 0.0 AP3B1_C Clathrin-adaptor complex-3 beta-1 subunit pfam14806 2 0 0.0 Coatomer_b_Cpla Coatomer beta subunit appendage pfam14833 2 0 0.0 NAD_binding_11 NAD-binding of NADP-dependent pfam14966 2 0 0.0 DNA_repr_REX1B DNA repair REX1-B pfam15072 2 0 0.0 DUF4539 Domain of unknown function (DUF4539) pfam15243 2 0 0.0 ANAPC15 Anaphase-promoting complex subunit 15 pfam15249 2 0 0.0 GLTSCR1 Conserved region of unknown function on GLTSCR pfam15325 2 0 0.0 MRI Modulator of retrovirus infection pfam15413 2 0 0.0 PH_11 Pleckstrin homology domain pfam15511 2 0 0.0 CENP-T_C Centromere kinetochore component CENP-T pfam15630 2 0 0.0 CENP-S Kinetochore component CENP-S pfam15906 2 0 0.0 zf-NOSIP Zinc-finger of nitric oxide pfam15916 2 0 0.0 DUF4743 Domain of unknown function (DUF4743) pfam15938 2 0 0.0 DUF4750 Domain of unknown function (DUF4750) pfam15963 2 0 0.0 Myb_DNA-bind_7 Myb DNA-binding like pfam16004 2 0 0.0 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein pfam16095 2 0 0.0 COR C-terminal of Roc pfam16100 2 0 0.0 RMI2 RecQ-mediated genome instability protein 2 pfam16199 2 0 0.0 Radical_SAM_C Radical_SAM C-terminal domain pfam16275 2 0 0.0 SF1-HH Splicing factor 1 helix-hairpin domain pfam16321 2 0 0.0 Ribosom_S30AE_C Sigma 54 modulation/S30EA ribosomal pfam16381 2 0 0.0 Coatomer_g_Cpla Coatomer subunit gamma-1 C-terminal pfam16418 2 0 0.0 CNOT1_HEAT CCR4-NOT transcription complex subunit 1 pfam16491 2 0 0.0 Peptidase_M48_N CAAX prenyl protease N-terminal pfam16746 2 0 0.0 BAR_3 BAR domain of APPL family pfam16910 2 0 0.0 VPS13_mid_rpt Repeating coiled region of VPS13 pfam16940 2 0 0.0 Tic110 Chloroplast envelope transporter pfam17005 2 0 0.0 WD40_like WD40-like domain pfam17098 2 0 0.0 Wtap Pre-mRNA-splicing regulator WTAP pfam08719 1 4 400.0 DUF1768 Domain of unknown function (DUF1768) pfam14624 1 4 400.0 Vwaint VWA / Hh protein intein-like pfam00742 1 3 300.0 Homoserine_dh Homoserine dehydrogenase pfam12327 1 3 300.0 FtsZ_C FtsZ family pfam00809 1 2 200.0 Pterin_bind Pterin binding enzyme pfam00848 1 2 200.0 Ring_hydroxyl_A Ring hydroxylating alpha subunit pfam02590 1 2 200.0 SPOUT_MTase Predicted SPOUT methyltransferase pfam02684 1 2 200.0 LpxB Lipid-A-disaccharide synthetase pfam02785 1 2 200.0 Biotin_carb_C Biotin carboxylase C-terminal domain pfam02797 1 2 200.0 Chal_sti_synt_C Chalcone and stilbene synthases pfam02934 1 2 200.0 GatB_N GatB/GatE catalytic domain pfam04571 1 2 200.0 Lipin_N lipin pfam06108 1 2 200.0 DUF952 Protein of unknown function (DUF952) pfam06159 1 2 200.0 DUF974 Protein of unknown function (DUF974) pfam07647 1 2 200.0 SAM_2 SAM domain (Sterile alpha motif) pfam13877 1 2 200.0 RPAP3_C Potential Monad-binding region of RPAP3 pfam14768 1 2 200.0 RPA_interact_C Replication protein A interacting pfam16201 1 2 200.0 NopRA1 Nucleolar pre-ribosomal-associated protein 1 pfam00127 1 1 100.0 Copper-bind Copper binding proteins pfam00430 1 1 100.0 ATP-synt_B ATP synthase B/B' CF(0) pfam00756 1 1 100.0 Esterase Putative esterase pfam01081 1 1 100.0 Aldolase KDPG and KHG aldolase pfam01113 1 1 100.0 DapB_N Dihydrodipicolinate reductase pfam01128 1 1 100.0 IspD 2-C-methyl-D-erythritol 4-phosphate pfam01645 1 1 100.0 Glu_synthase Conserved region in glutamate synthase pfam01799 1 1 100.0 Fer2_2 [2Fe-2S] binding domain pfam01868 1 1 100.0 UPF0086 Domain of unknown function UPF0086 pfam01984 1 1 100.0 dsDNA_bind Double-stranded DNA-binding domain pfam02183 1 1 100.0 HALZ Homeobox associated leucine zipper pfam02245 1 1 100.0 Pur_DNA_glyco Methylpurine-DNA glycosylase (MPG) pfam02391 1 1 100.0 MoaE MoaE protein pfam02772 1 1 100.0 S-AdoMet_synt_M S-adenosylmethionine synthetase pfam02803 1 1 100.0 Thiolase_C Thiolase pfam03256 1 1 100.0 ANAPC10 Anaphase-promoting complex pfam03343 1 1 100.0 SART-1 SART-1 family pfam03931 1 1 100.0 Skp1_POZ Skp1 family pfam03948 1 1 100.0 Ribosomal_L9_C Ribosomal protein L9 pfam04031 1 1 100.0 Las1 Las1-like pfam04121 1 1 100.0 Nup84_Nup100 Nuclear pore protein 84 / 107 pfam04377 1 1 100.0 ATE_C Arginine-tRNA-protein transferase pfam04420 1 1 100.0 CHD5 CHD5-like protein pfam04452 1 1 100.0 Methyltrans_RNA RNA methyltransferase pfam04592 1 1 100.0 SelP_N Selenoprotein P pfam04658 1 1 100.0 TAFII55_N TAFII55 protein conserved region pfam04821 1 1 100.0 TIMELESS Timeless protein pfam04841 1 1 100.0 Vps16_N Vps16 pfam05179 1 1 100.0 CDC73_C RNA pol II accessory factor pfam05292 1 1 100.0 MCD Malonyl-CoA decarboxylase (MCD) pfam05536 1 1 100.0 Neurochondrin Neurochondrin pfam05768 1 1 100.0 DUF836 Glutaredoxin-like domain (DUF836) pfam06046 1 1 100.0 Sec6 Exocyst complex component Sec6 pfam06113 1 1 100.0 BRE Brain and reproductive organ-expressed protein pfam06320 1 1 100.0 GCN5L1 GCN5-like protein 1 (GCN5L1) pfam06694 1 1 100.0 Plant_NMP1 Plant nuclear matrix protein 1 (NMP1) pfam07942 1 1 100.0 N2227 N2227-like protein pfam08083 1 1 100.0 PROCN PROCN (NUC071) domain pfam08293 1 1 100.0 MRP-S33 Mitochondrial ribosomal subunit S27 pfam08295 1 1 100.0 Sin3_corepress Sin3 family co-repressor pfam08507 1 1 100.0 COPI_assoc COPI associated protein pfam08514 1 1 100.0 STAG STAG domain pfam08568 1 1 100.0 Kinetochor_Ybp2 uncharacterized protein family pfam08755 1 1 100.0 YccV-like Hemimethylated DNA-binding protein YccV pfam08880 1 1 100.0 QLQ QLQ pfam09412 1 1 100.0 XendoU Endoribonuclease XendoU pfam09445 1 1 100.0 Methyltransf_15 RNA cap guanine-N2 methyltransferase pfam09752 1 1 100.0 DUF2048 Uncharacterized conserved protein (DUF2048) pfam09808 1 1 100.0 SNAPc_SNAP43 Small nuclear RNA activating complex pfam10189 1 1 100.0 DUF2356 Conserved protein (DUF2356) pfam10343 1 1 100.0 Q_salvage Potential Queuosine pfam10415 1 1 100.0 FumaraseC_C Fumarase C C-terminus pfam10483 1 1 100.0 Elong_Iki1 Elongator subunit Iki1 pfam10537 1 1 100.0 WAC_Acf1_DNA_bd ATP-utilizing chromatin assembly and pfam12009 1 1 100.0 Telomerase_RBD Telomerase ribonucleoprotein complex - pfam12095 1 1 100.0 DUF3571 Protein of unknown function (DUF3571) pfam12230 1 1 100.0 PRP21_like_P Pre-mRNA splicing factor PRP21 like pfam12617 1 1 100.0 LdpA_C Iron-Sulfur binding protein C terminal pfam12785 1 1 100.0 VESA1_N Variant erythrocyte surface antigen-1 pfam12795 1 1 100.0 MscS_porin Mechanosensitive ion channel porin domain pfam13370 1 1 100.0 Fer4_13 4Fe-4S single cluster domain of Ferredoxin I pfam14108 1 1 100.0 DUF4281 Domain of unknown function (DUF4281) pfam14374 1 1 100.0 Ribos_L4_asso_C 60S ribosomal protein L4 C-terminal pfam14500 1 1 100.0 MMS19_N Dos2-interacting transcription regulator of pfam14802 1 1 100.0 TMEM192 TMEM192 family pfam14868 1 1 100.0 DUF4487 Domain of unknown function (DUF4487) pfam14929 1 1 100.0 TAF1_subA TAF RNA Polymerase I subunit A pfam14990 1 1 100.0 DUF4516 Domain of unknown function (DUF4516) pfam15011 1 1 100.0 CK2S Casein Kinase 2 substrate pfam15324 1 1 100.0 TALPID3 Hedgehog signalling target pfam15749 1 1 100.0 UPF0544 uncharacterized protein family UPF0544 pfam15862 1 1 100.0 Coilin_N Coilin N-terminus pfam15921 1 1 100.0 CCDC158 Coiled-coil domain-containing protein 158 pfam15924 1 1 100.0 ALG11_N ALG11 mannosyltransferase N-terminus pfam16021 1 1 100.0 PDCD7 Programmed cell death protein 7 pfam16669 1 1 100.0 TTC5_OB Tetratricopeptide repeat protein 5 OB fold pfam16886 1 1 100.0 ATP-synt_ab_Xtn ATPsynthase alpha/beta subunit N-term pfam16901 1 1 100.0 DAO_C C-terminal domain of alpha-glycerophosphate pfam17125 1 1 100.0 Methyltr_RsmF_N N-terminal domain of 16S rRNA pfam00018 1 0 0.0 SH3_1 SH3 domain pfam00075 1 0 0.0 RNase_H RNase H pfam00116 1 0 0.0 COX2 Cytochrome C oxidase subunit II pfam00158 1 0 0.0 Sigma54_activat Sigma-54 interaction domain pfam00239 1 0 0.0 Resolvase Resolvase pfam00284 1 0 0.0 Cytochrom_B559a Lumenal portion of Cytochrome b559 pfam00289 1 0 0.0 CPSase_L_chain Carbamoyl-phosphate synthase L chain pfam00420 1 0 0.0 Oxidored_q2 NADH-ubiquinone/plastoquinone pfam00437 1 0 0.0 T2SSE Type II/IV secretion system protein pfam00438 1 0 0.0 S-AdoMet_synt_N S-adenosylmethionine synthetase pfam00474 1 0 0.0 SSF Sodium:solute symporter family pfam00497 1 0 0.0 SBP_bac_3 Bacterial extracellular solute-binding pfam00543 1 0 0.0 P-II Nitrogen regulatory protein P-II pfam00563 1 0 0.0 EAL EAL domain pfam00580 1 0 0.0 UvrD-helicase UvrD/REP helicase N-terminal domain pfam00589 1 0 0.0 Phage_integrase Phage integrase family pfam00662 1 0 0.0 Proton_antipo_N NADH-Ubiquinone oxidoreductase (complex pfam00684 1 0 0.0 DnaJ_CXXCXGXG DnaJ central domain pfam00691 1 0 0.0 OmpA OmpA family pfam00707 1 0 0.0 IF3_C Translation initiation factor IF-3 pfam00709 1 0 0.0 Adenylsucc_synt Adenylosuccinate synthetase pfam00805 1 0 0.0 Pentapeptide Pentapeptide repeats (8 copies) pfam00902 1 0 0.0 TatC Sec-independent protein translocase protein pfam00941 1 0 0.0 FAD_binding_5 FAD binding domain in molybdopterin pfam00989 1 0 0.0 PAS PAS fold pfam00990 1 0 0.0 GGDEF Diguanylate cyclase pfam01029 1 0 0.0 NusB NusB family pfam01037 1 0 0.0 AsnC_trans_reg AsnC family pfam01041 1 0 0.0 DegT_DnrJ_EryC1 DegT/DnrJ/EryC1/StrS aminotransferase pfam01047 1 0 0.0 MarR MarR family pfam01115 1 0 0.0 F_actin_cap_B F-actin capping protein pfam01116 1 0 0.0 F_bP_aldolase Fructose-bisphosphate aldolase class-II pfam01125 1 0 0.0 G10 G10 protein pfam01174 1 0 0.0 SNO SNO glutamine amidotransferase family pfam01205 1 0 0.0 UPF0029 Uncharacterized protein family UPF0029 pfam01288 1 0 0.0 HPPK pfam01321 1 0 0.0 Creatinase_N Creatinase/Prolidase N-terminal domain pfam01339 1 0 0.0 CheB_methylest CheB methylesterase pfam01341 1 0 0.0 Glyco_hydro_6 Glycosyl hydrolases family 6 pfam01367 1 0 0.0 5_3_exonuc 5'-3' exonuclease pfam01451 1 0 0.0 LMWPc Low molecular weight phosphotyrosine protein pfam01503 1 0 0.0 PRA-PH Phosphoribosyl-ATP pyrophosphohydrolase pfam01584 1 0 0.0 CheW CheW-like domain pfam01599 1 0 0.0 Ribosomal_S27 Ribosomal protein S27a pfam01613 1 0 0.0 Flavin_Reduct Flavin reductase like domain pfam01695 1 0 0.0 IstB_IS21 IstB-like ATP binding protein pfam01709 1 0 0.0 Transcrip_reg Transcriptional regulator pfam01713 1 0 0.0 Smr Smr domain pfam01725 1 0 0.0 Ham1p_like Ham1 family pfam01729 1 0 0.0 QRPTase_C Quinolinate phosphoribosyl transferase pfam01841 1 0 0.0 Transglut_core Transglutaminase-like superfamily pfam01857 1 0 0.0 RB_B Retinoblastoma-associated protein B domain pfam01876 1 0 0.0 RNase_P_p30 RNase P subunit p30 pfam01894 1 0 0.0 UPF0047 uncharacterized protein family UPF0047 pfam01909 1 0 0.0 NTP_transf_2 Nucleotidyltransferase domain pfam01922 1 0 0.0 SRP19 SRP19 protein pfam01968 1 0 0.0 Hydantoinase_A Hydantoinase/oxoprolinase pfam02104 1 0 0.0 SURF1 SURF1 family pfam02110 1 0 0.0 HK Hydroxyethylthiazole kinase family pfam02129 1 0 0.0 Peptidase_S15 X-Pro dipeptidyl-peptidase (S15 family) pfam02186 1 0 0.0 TFIIE_beta TFIIE beta subunit core domain pfam02224 1 0 0.0 Cytidylate_kin Cytidylate kinase pfam02296 1 0 0.0 Alpha_adaptin_C Alpha adaptin AP2 pfam02359 1 0 0.0 CDC48_N Cell division protein 48 (CDC48) pfam02361 1 0 0.0 CbiQ Cobalt transport protein pfam02481 1 0 0.0 DNA_processg_A DNA recombination-mediator protein A pfam02537 1 0 0.0 CRCB CrcB-like protein pfam02560 1 0 0.0 Cyanate_lyase Cyanate lyase C-terminal domain pfam02569 1 0 0.0 Pantoate_ligase Pantoate-beta-alanine ligase pfam02580 1 0 0.0 Tyr_Deacylase D-Tyr-tRNA(Tyr) deacylase pfam02597 1 0 0.0 ThiS ThiS family pfam02669 1 0 0.0 KdpC K+-transporting ATPase pfam02683 1 0 0.0 DsbD Cytochrome C biogenesis protein transmembrane pfam02724 1 0 0.0 CDC45 CDC45-like protein pfam02746 1 0 0.0 MR_MLE_N Mandelate racemase / muconate lactonizing pfam02774 1 0 0.0 Semialdhyde_dhC Semialdehyde dehydrogenase pfam02790 1 0 0.0 COX2_TM Cytochrome C oxidase subunit II pfam02810 1 0 0.0 SEC-C SEC-C motif pfam02817 1 0 0.0 E3_binding e3 binding domain pfam02875 1 0 0.0 Mur_ligase_C Mur ligase family pfam02896 1 0 0.0 PEP-utilizers_C PEP-utilizing enzyme pfam02900 1 0 0.0 LigB Catalytic LigB subunit of aromatic ring-opening pfam02910 1 0 0.0 Succ_DH_flav_C Fumarate reductase flavoprotein C-term pfam03091 1 0 0.0 CutA1 CutA1 divalent ion tolerance protein pfam03147 1 0 0.0 FDX-ACB Ferredoxin-fold anticodon binding domain pfam03184 1 0 0.0 DDE_1 DDE superfamily endonuclease pfam03400 1 0 0.0 DDE_Tnp_IS1 IS1 transposase pfam03417 1 0 0.0 AAT Acyl-coenzyme A:6-aminopenicillanic acid pfam03455 1 0 0.0 dDENN dDENN domain pfam03456 1 0 0.0 uDENN uDENN domain pfam03471 1 0 0.0 CorC_HlyC Transporter associated domain pfam03476 1 0 0.0 MOSC_N MOSC N-terminal beta barrel domain pfam03477 1 0 0.0 ATP-cone ATP cone domain pfam03486 1 0 0.0 HI0933_like HI0933-like protein pfam03564 1 0 0.0 DUF1759 Protein of unknown function (DUF1759) pfam03592 1 0 0.0 Terminase_2 Terminase small subunit pfam03610 1 0 0.0 EIIA-man PTS system fructose IIA component pfam03725 1 0 0.0 RNase_PH_C 3' exoribonuclease family pfam03743 1 0 0.0 TrbI Bacterial conjugation TrbI-like protein pfam03745 1 0 0.0 DUF309 Domain of unknown function (DUF309) pfam03765 1 0 0.0 CRAL_TRIO_N CRAL/TRIO pfam03819 1 0 0.0 MazG MazG nucleotide pyrophosphohydrolase domain pfam03839 1 0 0.0 Sec62 Translocation protein Sec62 pfam03871 1 0 0.0 RNA_pol_Rpb5_N RNA polymerase Rpb5 pfam03912 1 0 0.0 Psb28 Psb28 protein pfam03962 1 0 0.0 Mnd1 Mnd1 family pfam04057 1 0 0.0 Rep-A_N Replication factor-A protein 1 pfam04156 1 0 0.0 IncA IncA protein pfam04158 1 0 0.0 Sof1 Sof1-like domain pfam04187 1 0 0.0 Cofac_haem_bdg Haem-binding uptake pfam04192 1 0 0.0 Utp21 Utp21 specific WD40 associated putative domain pfam04212 1 0 0.0 MIT MIT (microtubule interacting and transport) pfam04233 1 0 0.0 Phage_Mu_F Phage Mu protein F like protein pfam04481 1 0 0.0 DUF561 Protein of unknown function (DUF561) pfam04545 1 0 0.0 Sigma70_r4 Sigma-70 pfam04547 1 0 0.0 Anoctamin Calcium-activated chloride channel pfam04551 1 0 0.0 GcpE GcpE protein pfam04563 1 0 0.0 RNA_pol_Rpb2_1 RNA polymerase beta subunit pfam04566 1 0 0.0 RNA_pol_Rpb2_4 RNA polymerase Rpb2 pfam04679 1 0 0.0 DNA_ligase_A_C ATP dependent DNA ligase C terminal pfam04824 1 0 0.0 Rad21_Rec8 Conserved region of Rad21 / Rec8 like pfam04840 1 0 0.0 Vps16_C Vps16 pfam04851 1 0 0.0 ResIII Type III restriction enzyme pfam05007 1 0 0.0 Mannosyl_trans Mannosyltransferase (PIG-M) pfam05026 1 0 0.0 DCP2 Dcp2 pfam05050 1 0 0.0 Methyltransf_21 Methyltransferase FkbM domain pfam05066 1 0 0.0 HARE-HTH HB1 pfam05131 1 0 0.0 Pep3_Vps18 Pep3/Vps18/deep orange family pfam05140 1 0 0.0 ResB ResB-like family pfam05206 1 0 0.0 TRM13 Methyltransferase TRM13 pfam05241 1 0 0.0 EBP Emopamil binding protein pfam05343 1 0 0.0 Peptidase_M42 M42 glutamyl aminopeptidase pfam05405 1 0 0.0 Mt_ATP-synt_B Mitochondrial ATP synthase B chain pfam05443 1 0 0.0 ROS_MUCR ROS/MUCR transcriptional regulator protein pfam05466 1 0 0.0 BASP1 Brain acid soluble protein 1 (BASP1 protein) pfam05605 1 0 0.0 zf-Di19 Drought induced 19 protein (Di19) pfam05622 1 0 0.0 HOOK HOOK protein pfam05721 1 0 0.0 PhyH Phytanoyl-CoA dioxygenase (PhyH) pfam05811 1 0 0.0 DUF842 Eukaryotic protein of unknown function (DUF842) pfam05871 1 0 0.0 ESCRT-II ESCRT-II complex subunit pfam05916 1 0 0.0 Sld5 GINS complex protein pfam06005 1 0 0.0 DUF904 Protein of unknown function (DUF904) pfam06224 1 0 0.0 HTH_42 Winged helix DNA-binding domain pfam06278 1 0 0.0 CNDH2_N Condensin II complex subunit CAP-H2 or CNDH2 pfam06280 1 0 0.0 fn3_5 Fn3-like domain pfam06346 1 0 0.0 Drf_FH1 Formin Homology Region 1 pfam06461 1 0 0.0 DUF1086 Domain of Unknown Function (DUF1086) pfam06463 1 0 0.0 Mob_synth_C Molybdenum Cofactor Synthesis C pfam06487 1 0 0.0 SAP18 Sin3 associated polypeptide p18 (SAP18) pfam06644 1 0 0.0 ATP11 ATP11 protein pfam06699 1 0 0.0 PIG-F GPI biosynthesis protein family Pig-F pfam06776 1 0 0.0 IalB Invasion associated locus B (IalB) protein pfam06979 1 0 0.0 TMEM70 Assembly pfam07052 1 0 0.0 Hep_59 Hepatocellular carcinoma-associated antigen 59 pfam07086 1 0 0.0 Jagunal Jagunal pfam07109 1 0 0.0 Mg-por_mtran_C Magnesium-protoporphyrin IX pfam07224 1 0 0.0 Chlorophyllase Chlorophyllase pfam07303 1 0 0.0 Occludin_ELL Occludin homology domain pfam07516 1 0 0.0 SecA_SW SecA Wing and Scaffold domain pfam07521 1 0 0.0 RMMBL RNA-metabolizing metallo-beta-lactamase pfam07529 1 0 0.0 HSA HSA pfam07973 1 0 0.0 tRNA_SAD Threonyl and Alanyl tRNA synthetase second pfam07991 1 0 0.0 IlvN Acetohydroxy acid isomeroreductase pfam08066 1 0 0.0 PMC2NT PMC2NT (NUC016) domain pfam08082 1 0 0.0 PRO8NT PRO8NT (NUC069) pfam08132 1 0 0.0 AdoMetDC_leader S-adenosyl-l-methionine decarboxylase pfam08213 1 0 0.0 DUF1713 Mitochondrial domain of unknown function pfam08271 1 0 0.0 TF_Zn_Ribbon TFIIB zinc-binding pfam08276 1 0 0.0 PAN_2 PAN-like domain pfam08285 1 0 0.0 DPM3 Dolichol-phosphate mannosyltransferase subunit 3 pfam08338 1 0 0.0 DUF1731 Domain of unknown function (DUF1731) pfam08367 1 0 0.0 M16C_assoc Peptidase M16C associated pfam08433 1 0 0.0 KTI12 Chromatin associated protein KTI12 pfam08450 1 0 0.0 SGL SMP-30/Gluconolaconase/LRE-like region pfam08458 1 0 0.0 PH_2 Plant pleckstrin homology-like region pfam08490 1 0 0.0 DUF1744 Domain of unknown function (DUF1744) pfam08506 1 0 0.0 Cse1 Cse1 pfam08511 1 0 0.0 COQ9 COQ9 pfam08512 1 0 0.0 Rtt106 Histone chaperone Rttp106-like pfam08513 1 0 0.0 LisH LisH pfam08519 1 0 0.0 RFC1 Replication factor RFC1 C terminal domain pfam08529 1 0 0.0 NusA_N NusA N-terminal domain pfam08548 1 0 0.0 Peptidase_M10_C Peptidase M10 serralysin C terminal pfam08580 1 0 0.0 KAR9 Yeast cortical protein KAR9 pfam08614 1 0 0.0 ATG16 Autophagy protein 16 (ATG16) pfam08615 1 0 0.0 RNase_H2_suC Ribonuclease H2 non-catalytic subunit pfam08620 1 0 0.0 RPAP1_C RPAP1-like pfam08625 1 0 0.0 Utp13 Utp13 specific WD40 associated domain pfam08645 1 0 0.0 PNK3P Polynucleotide kinase 3 phosphatase pfam08669 1 0 0.0 GCV_T_C Glycine cleavage T-protein C-terminal barrel pfam08712 1 0 0.0 Nfu_N Scaffold protein Nfu/NifU N terminal pfam08777 1 0 0.0 RRM_3 RNA binding motif pfam08785 1 0 0.0 Ku_PK_bind Ku C terminal domain like pfam08911 1 0 0.0 NUP50 NUP50 (Nucleoporin 50 kDa) pfam08996 1 0 0.0 zf-DNA_Pol DNA Polymerase alpha zinc finger pfam09088 1 0 0.0 MIF4G_like MIF4G like pfam09111 1 0 0.0 SLIDE SLIDE pfam09127 1 0 0.0 Leuk-A4-hydro_C Leukotriene A4 hydrolase pfam09140 1 0 0.0 MipZ ATPase MipZ pfam09184 1 0 0.0 PPP4R2 PPP4R2 pfam09239 1 0 0.0 Topo-VIb_trans Topoisomerase VI B subunit pfam09261 1 0 0.0 Alpha-mann_mid Alpha mannosidase pfam09290 1 0 0.0 AcetDehyd-dimer Prokaryotic acetaldehyde dehydrogenase pfam09326 1 0 0.0 NADH_dhqG_C NADH-ubiquinone oxidoreductase subunit G pfam09336 1 0 0.0 Vps4_C Vps4 C terminal oligomerization domain pfam09358 1 0 0.0 E1_UFD Ubiquitin fold domain pfam09360 1 0 0.0 zf-CDGSH Iron-binding zinc finger CDGSH type pfam09368 1 0 0.0 Sas10 Sas10 C-terminal domain pfam09415 1 0 0.0 CENP-X CENP-S associating Centromere protein X pfam09419 1 0 0.0 PGP_phosphatase Mitochondrial PGP phosphatase pfam09454 1 0 0.0 Vps23_core Vps23 core domain pfam09468 1 0 0.0 RNase_H2-Ydr279 Ydr279p protein family (RNase H2 pfam09490 1 0 0.0 CbtA Probable cobalt transporter subunit (CbtA) pfam09531 1 0 0.0 Ndc1_Nup Nucleoporin protein Ndc1-Nup pfam09751 1 0 0.0 Es2 Nuclear protein Es2 pfam09775 1 0 0.0 Keratin_assoc Keratinocyte-associated protein 2 pfam09811 1 0 0.0 Yae1_N Essential protein Yae1 pfam09814 1 0 0.0 HECT_2 HECT-like Ubiquitin-conjugating enzyme pfam09835 1 0 0.0 DUF2062 Uncharacterized protein conserved in bacteria pfam09991 1 0 0.0 DUF2232 Predicted membrane protein (DUF2232) pfam10157 1 0 0.0 DUF2365 Uncharacterized conserved protein (DUF2365) pfam10168 1 0 0.0 Nup88 Nuclear pore component pfam10175 1 0 0.0 MPP6 M-phase phosphoprotein 6 pfam10178 1 0 0.0 PAC3 Proteasome assembly chaperone 3 pfam10187 1 0 0.0 Nefa_Nip30_N N-terminal domain of NEFA-interacting pfam10197 1 0 0.0 Cir_N N-terminal domain of CBF1 interacting pfam10241 1 0 0.0 KxDL Uncharacterized conserved protein pfam10253 1 0 0.0 PRCC Mitotic checkpoint regulator pfam10268 1 0 0.0 Tmemb_161AB Predicted transmembrane protein 161AB pfam10357 1 0 0.0 Kin17_mid Domain of Kin17 curved DNA-binding protein pfam10394 1 0 0.0 Hat1_N Histone acetyl transferase HAT1 N-terminus pfam10405 1 0 0.0 BHD_3 Rad4 beta-hairpin domain 3 pfam10408 1 0 0.0 Ufd2P_core Ubiquitin elongating factor core pfam10453 1 0 0.0 NUFIP1 Nuclear fragile X mental retardation-interacting pfam10503 1 0 0.0 Esterase_phd Esterase PHB depolymerase pfam10596 1 0 0.0 U6-snRNA_bdg U6-snRNA interacting domain of PrP8 pfam11566 1 0 0.0 PI31_Prot_N PI31 proteasome regulator N-terminal pfam11605 1 0 0.0 Vps36_ESCRT-II Vacuolar protein sorting protein 36 pfam11707 1 0 0.0 Npa1 Ribosome 60S biogenesis N-terminal pfam11718 1 0 0.0 CPSF73-100_C Pre-mRNA 3'-end-processing endonuclease pfam11875 1 0 0.0 DUF3395 Domain of unknown function (DUF3395) pfam11909 1 0 0.0 NdhN NADH-quinone oxidoreductase cyanobacterial subunit pfam11995 1 0 0.0 DUF3490 Domain of unknown function (DUF3490) pfam12041 1 0 0.0 DELLA Transcriptional regulator DELLA protein N pfam12134 1 0 0.0 PRP8_domainIV PRP8 domain IV core pfam12204 1 0 0.0 DUF3598 Domain of unknown function (DUF3598) pfam12338 1 0 0.0 RbcS Ribulose-1 pfam12619 1 0 0.0 MCM2_N Mini-chromosome maintenance protein 2 pfam12697 1 0 0.0 Abhydrolase_6 Alpha/beta hydrolase family pfam12764 1 0 0.0 Gly-rich_Ago1 Glycine-rich region of argonaut pfam12806 1 0 0.0 Acyl-CoA_dh_C Acetyl-CoA dehydrogenase C-terminal like pfam12896 1 0 0.0 ANAPC4 Anaphase-promoting complex pfam12922 1 0 0.0 Cnd1_N non-SMC mitotic condensation complex subunit 1 pfam12928 1 0 0.0 tRNA_int_end_N2 tRNA-splicing endonuclease subunit pfam12932 1 0 0.0 Sec16 Vesicle coat trafficking protein Sec16 pfam12972 1 0 0.0 NAGLU_C Alpha-N-acetylglucosaminidase (NAGLU) pfam13279 1 0 0.0 4HBT_2 Thioesterase-like superfamily pfam13298 1 0 0.0 LigD_N DNA polymerase Ligase (LigD) pfam13307 1 0 0.0 Helicase_C_2 Helicase C-terminal domain pfam13340 1 0 0.0 DUF4096 Putative transposase of IS4/5 family pfam13377 1 0 0.0 Peripla_BP_3 Periplasmic binding protein-like domain pfam13405 1 0 0.0 EF-hand_6 EF-hand domain pfam13433 1 0 0.0 Peripla_BP_5 Periplasmic binding protein domain pfam13458 1 0 0.0 Peripla_BP_6 Periplasmic binding protein pfam13462 1 0 0.0 Thioredoxin_4 Thioredoxin pfam13476 1 0 0.0 AAA_23 AAA domain pfam13481 1 0 0.0 AAA_25 AAA domain pfam13625 1 0 0.0 Helicase_C_3 Helicase conserved C-terminal domain pfam13640 1 0 0.0 2OG-FeII_Oxy_3 2OG-Fe(II) oxygenase superfamily pfam13661 1 0 0.0 2OG-FeII_Oxy_4 2OG-Fe(II) oxygenase superfamily pfam13696 1 0 0.0 zf-CCHC_2 Zinc knuckle pfam13713 1 0 0.0 BRX_N Transcription factor BRX N-terminal domain pfam14138 1 0 0.0 COX16 Cytochrome c oxidase assembly protein COX16 pfam14225 1 0 0.0 MOR2-PAG1_C Cell morphogenesis C-terminal pfam14234 1 0 0.0 DUF4336 Domain of unknown function (DUF4336) pfam14383 1 0 0.0 VARLMGL DUF761-associated sequence motif pfam14510 1 0 0.0 ABC_trans_N ABC-transporter extracellular N-terminal pfam14559 1 0 0.0 TPR_19 Tetratricopeptide repeat pfam14593 1 0 0.0 PH_3 PH domain pfam14629 1 0 0.0 ORC4_C Origin recognition complex (ORC) subunit 4 pfam14648 1 0 0.0 FAM91_C FAM91 C-terminus pfam14678 1 0 0.0 FANCI_S4 FANCI solenoid 4 pfam14703 1 0 0.0 PHM7_cyt Cytosolic domain of 10TM putative phosphate pfam14736 1 0 0.0 N_Asn_amidohyd Protein N-terminal asparagine pfam14767 1 0 0.0 RPA_interact_M Replication protein A interacting pfam14778 1 0 0.0 ODR4-like Olfactory receptor 4-like pfam14780 1 0 0.0 DUF4477 Domain of unknown function (DUF4477) pfam14870 1 0 0.0 PSII_BNR Photosynthesis system II assembly factor pfam14968 1 0 0.0 CCDC84 Coiled coil protein 84 pfam15375 1 0 0.0 DUF4602 Domain of unknown function (DUF4602) pfam15402 1 0 0.0 Spc7_N N-terminus of kinetochore NMS complex subunit pfam15614 1 0 0.0 WHIM3 WSTF pfam15685 1 0 0.0 GGN Gametogenetin pfam15805 1 0 0.0 SCNM1_acidic Acidic C-terminal region of sodium channel pfam16040 1 0 0.0 DUF4792 Domain of unknown function (DUF4792) pfam16050 1 0 0.0 CDC73_N Paf1 complex subunit CDC73 N-terminal pfam16124 1 0 0.0 RecQ_Zn_bind RecQ zinc-binding pfam16177 1 0 0.0 ACAS_N Acetyl-coenzyme A synthetase N-terminus pfam16188 1 0 0.0 Peptidase_M24_C C-terminal region of peptidase_M24 pfam16206 1 0 0.0 Mon2_C C-terminal region of Mon2 protein pfam16242 1 0 0.0 Pyrid_ox_like Pyridoxamine 5'-phosphate oxidase like pfam16420 1 0 0.0 ATG7_N Ubiquitin-like modifier-activating enzyme ATG7 pfam16503 1 0 0.0 zn-ribbon_14 Zinc-ribbon pfam16858 1 0 0.0 CNDH2_C Condensin II complex subunit CAP-H2 or CNDH2 pfam16909 1 0 0.0 VPS13_C Vacuolar-sorting-associated 13 protein pfam16916 1 0 0.0 ZT_dimer Dimerization domain of Zinc Transporter Total 57900 18218 31.5 Unique Pfam 3505 2454